RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 CHAC1Q9BUX1 264 aa8.42□□□□□ -1.06
VRK3-203ENST00000424804 UBR4Q5T4S7 5183 aa8.42□□□□□ -1.06
VRK3-203ENST00000424804 A0A1B0GXF2 115 aa8.41□□□□□ -1.06
VRK3-203ENST00000424804 D6R8Y8 96 aa8.41□□□□□ -1.06
VRK3-203ENST00000424804 C14orf177Q52M58 125 aa8.41□□□□□ -1.06
VRK3-203ENST00000424804 UQCC3Q6UW78 93 aa8.41□□□□□ -1.06
VRK3-203ENST00000424804 KIR2DL4Q99706 377 aa8.41□□□□□ -1.06
VRK3-203ENST00000424804 TRAV8-4A0A0B4J246 113 aa8.4□□□□□ -1.06
VRK3-203ENST00000424804 TMEM218A2RU14 115 aa8.4□□□□□ -1.06
VRK3-203ENST00000424804 C7orf77A4D0Y5 90 aa8.4□□□□□ -1.06
VRK3-203ENST00000424804 H7C423 109 aa8.4□□□□□ -1.06
VRK3-203ENST00000424804 ADCYAP1P18509 176 aa8.4□□□□□ -1.06
VRK3-203ENST00000424804 DGAT2L7PQ6IED9 249 aa8.4□□□□□ -1.06
VRK3-203ENST00000424804 OR5A1Q8NGJ0 315 aa8.4□□□□□ -1.06
VRK3-203ENST00000424804 TRBV27A0A0K0K1C4 114 aa8.39□□□□□ -1.07
VRK3-203ENST00000424804 LINC00862A6NCI5 91 aa8.39□□□□□ -1.07
VRK3-203ENST00000424804 GAGE12HA6NDE8 117 aa8.39□□□□□ -1.07
VRK3-203ENST00000424804 TNFRSF6BO95407 300 aa8.39□□□□□ -1.07
VRK3-203ENST00000424804 KRTAP26-1Q6PEX3 210 aa8.39□□□□□ -1.07
VRK3-203ENST00000424804 ATP5L2Q7Z4Y8 100 aa8.39□□□□□ -1.07
VRK3-203ENST00000424804 NPYP01303 97 aa8.38□□□□□ -1.07
VRK3-203ENST00000424804 ESDP10768 282 aa8.38□□□□□ -1.07
VRK3-203ENST00000424804 ZNF25P17030 456 aaPredicted RBP8.38□□□□□ -1.07
VRK3-203ENST00000424804 hDV102S1A0JD36 115 aa8.37□□□□□ -1.07
VRK3-203ENST00000424804 PRSS1P07477 247 aa8.37□□□□□ -1.07
VRK3-203ENST00000424804 TMEM136Q6ZRR5 245 aa8.37□□□□□ -1.07
VRK3-203ENST00000424804 ORMDL3Q8N138 153 aa8.37□□□□□ -1.07
VRK3-203ENST00000424804 PRELID3AQ96N28 172 aa8.37□□□□□ -1.07
VRK3-203ENST00000424804 C20orf78Q9BR46 151 aa8.37□□□□□ -1.07
VRK3-203ENST00000424804 SMIM2Q9BVW6 85 aa8.37□□□□□ -1.07
VRK3-203ENST00000424804 LOC389332A0A1B0GUA5 103 aa8.36□□□□□ -1.07
VRK3-203ENST00000424804 PPBPP02775 128 aa8.36□□□□□ -1.07
VRK3-203ENST00000424804 XCL1P47992 114 aa8.36□□□□□ -1.07
VRK3-203ENST00000424804 HNRNPA3P51991 378 aaKnown RBP8.36□□□□□ -1.07
VRK3-203ENST00000424804 RNASE13Q5GAN3 156 aaKnown RBP8.36□□□□□ -1.07
VRK3-203ENST00000424804 CHCHD10Q8WYQ3 142 aaPredicted RBP8.36□□□□□ -1.07
VRK3-203ENST00000424804 TRBV24-1A0A075B6N3 115 aa8.35□□□□□ -1.07
VRK3-203ENST00000424804 TCAPO15273 167 aa8.35□□□□□ -1.07
VRK3-203ENST00000424804 ZNF664Q8N3J9 261 aa8.35□□□□□ -1.07
VRK3-203ENST00000424804 TMEM18Q96B42 140 aa8.35□□□□□ -1.07
VRK3-203ENST00000424804 SEC11CQ9BY50 192 aa8.35□□□□□ -1.07
VRK3-203ENST00000424804 PANO1I0J062 215 aa8.34□□□□□ -1.07
VRK3-203ENST00000424804 CCL25O15444 150 aa8.34□□□□□ -1.07
VRK3-203ENST00000424804 OXTP01178 125 aa8.34□□□□□ -1.07
VRK3-203ENST00000424804 SMAGPQ0VAQ4 97 aa8.34□□□□□ -1.07
VRK3-203ENST00000424804 SS18Q15532 418 aa8.34□□□□□ -1.07
VRK3-203ENST00000424804 HIGD2BQ4VC39 106 aa8.34□□□□□ -1.07
VRK3-203ENST00000424804 CTDSP1Q9GZU7 261 aa8.34□□□□□ -1.07
VRK3-203ENST00000424804 CDC42SE2Q9NRR3 84 aa8.34□□□□□ -1.07
VRK3-203ENST00000424804 AP5S1Q9NUS5 200 aa8.34□□□□□ -1.07
VRK3-203ENST00000424804 TNXBP22105 4242 aa8.34□□□□□ -1.07
VRK3-203ENST00000424804 LINC00959A0A1B0GUT2 108 aa8.33□□□□□ -1.08
VRK3-203ENST00000424804 RAB5AP20339 215 aa8.33□□□□□ -1.08
VRK3-203ENST00000424804 S100PP25815 95 aa8.33□□□□□ -1.08
VRK3-203ENST00000424804 RPL39P62891 51 aaKnown RBP8.33□□□□□ -1.08
VRK3-203ENST00000424804 MRPL52Q86TS9 123 aaKnown RBP8.33□□□□□ -1.08
VRK3-203ENST00000424804 CLRN3Q8NCR9 226 aa8.33□□□□□ -1.08
VRK3-203ENST00000424804 UBE2D4Q9Y2X8 147 aa8.33□□□□□ -1.08
VRK3-203ENST00000424804 PHOX2AO14813 284 aa8.32□□□□□ -1.08
VRK3-203ENST00000424804 RPL32P62910 135 aaKnown RBP8.32□□□□□ -1.08
VRK3-203ENST00000424804 CFAP161Q6P656 301 aa8.32□□□□□ -1.08
VRK3-203ENST00000424804 Q6ZUT4 128 aa8.32□□□□□ -1.08
VRK3-203ENST00000424804 C9orf163Q8N9P6 203 aa8.32□□□□□ -1.08
VRK3-203ENST00000424804 MAP1LC3AQ9H492 121 aa8.32□□□□□ -1.08
VRK3-203ENST00000424804 RPS10P5Q9NQ39 176 aa8.32□□□□□ -1.08
VRK3-203ENST00000424804 TRAV13-1A0A0B4J241 112 aa8.31□□□□□ -1.08
VRK3-203ENST00000424804 SDIM1Q6ZPB5 146 aa8.31□□□□□ -1.08
VRK3-203ENST00000424804 IMMP2LQ96T52 175 aa8.31□□□□□ -1.08
VRK3-203ENST00000424804 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.31□□□□□ -1.08
VRK3-203ENST00000424804 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.3□□□□□ -1.08
VRK3-203ENST00000424804 FOXI1Q12951 378 aa8.3□□□□□ -1.08
VRK3-203ENST00000424804 KIAA1644Q3SXP7 199 aa8.3□□□□□ -1.08
VRK3-203ENST00000424804 SERTAD4-AS1Q5TG53 156 aa8.3□□□□□ -1.08
VRK3-203ENST00000424804 C15orf56Q8N910 161 aa8.3□□□□□ -1.08
VRK3-203ENST00000424804 OPRPNQ99935 248 aaPredicted RBP8.29□□□□□ -1.08
VRK3-203ENST00000424804 APOC3P02656 99 aa8.28□□□□□ -1.08
VRK3-203ENST00000424804 SLPIP03973 132 aa8.28□□□□□ -1.08
VRK3-203ENST00000424804 MT1HL1P0DM35 61 aa8.28□□□□□ -1.08
VRK3-203ENST00000424804 MALP21145 153 aa8.28□□□□□ -1.08
VRK3-203ENST00000424804 RPL37AP61513 92 aaKnown RBP8.28□□□□□ -1.08
VRK3-203ENST00000424804 CIRBPQ14011 172 aaKnown RBP8.28□□□□□ -1.08
VRK3-203ENST00000424804 LINC00526Q96FQ7 95 aa8.28□□□□□ -1.08
VRK3-203ENST00000424804 TIMM21Q9BVV7 248 aa8.28□□□□□ -1.08
VRK3-203ENST00000424804 LAMTOR2Q9Y2Q5 125 aa8.28□□□□□ -1.08
VRK3-203ENST00000424804 CSDC2Q9Y534 153 aaKnown RBP8.28□□□□□ -1.08
VRK3-203ENST00000424804 TRAV9-1A0A075B6T8 112 aa8.27□□□□□ -1.09
VRK3-203ENST00000424804 C1orf196B1AJZ1 125 aa8.27□□□□□ -1.09
VRK3-203ENST00000424804 IFI27P40305 119 aaPredicted RBP8.27□□□□□ -1.09
VRK3-203ENST00000424804 RHEBQ15382 184 aa8.27□□□□□ -1.09
VRK3-203ENST00000424804 C10orf91Q5T1B1 145 aa8.27□□□□□ -1.09
VRK3-203ENST00000424804 CD164L2Q6UWJ8 174 aa8.27□□□□□ -1.09
VRK3-203ENST00000424804 Q8N8P6 123 aa8.27□□□□□ -1.09
VRK3-203ENST00000424804 DPH3Q96FX2 82 aa8.27□□□□□ -1.09
VRK3-203ENST00000424804 SPANXA1Q9NS26 97 aa8.27□□□□□ -1.09
VRK3-203ENST00000424804 CARHSP1Q9Y2V2 147 aaKnown RBP8.27□□□□□ -1.09
VRK3-203ENST00000424804 IGHV3-64A0A075B6Q5 118 aa8.26□□□□□ -1.09
VRK3-203ENST00000424804 IGHV1-58A0A0C4DH39 117 aa8.26□□□□□ -1.09
VRK3-203ENST00000424804 IFITM10A6NMD0 228 aa8.26□□□□□ -1.09
VRK3-203ENST00000424804 CNBPP62633 177 aaKnown RBP8.26□□□□□ -1.09
VRK3-203ENST00000424804 NDUFA5Q16718 116 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms