RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 EHBP1L1Q8N3D4 1523 aa1.99□□□□□ -2.09
SF3B1-205ENST00000424674 RGPD2P0DJD1 1756 aa1.99□□□□□ -2.09
SF3B1-205ENST00000424674 SDK2Q58EX2 2172 aa1.99□□□□□ -2.09
SF3B1-205ENST00000424674 LMTK2Q8IWU2 1503 aa1.98□□□□□ -2.09
SF3B1-205ENST00000424674 NRXN2Q9P2S2 1712 aa1.98□□□□□ -2.09
SF3B1-205ENST00000424674 F8VRH5 84 aa1.98□□□□□ -2.09
SF3B1-205ENST00000424674 FXYD1O00168 92 aa1.98□□□□□ -2.09
SF3B1-205ENST00000424674 INE1O15225 51 aa1.98□□□□□ -2.09
SF3B1-205ENST00000424674 COX8AP10176 69 aa1.98□□□□□ -2.09
SF3B1-205ENST00000424674 Q6JHZ5 121 aa1.98□□□□□ -2.09
SF3B1-205ENST00000424674 LINC00322Q6ZN03 302 aaPredicted RBP1.98□□□□□ -2.09
SF3B1-205ENST00000424674 KRTAP5-5Q701N2 237 aaPredicted RBP1.98□□□□□ -2.09
SF3B1-205ENST00000424674 MYOM1P52179 1685 aa1.98□□□□□ -2.09
SF3B1-205ENST00000424674 UBR1Q8IWV7 1749 aa1.97□□□□□ -2.09
SF3B1-205ENST00000424674 IGKV2-40A0A087WW87 121 aaPredicted RBP1.97□□□□□ -2.09
SF3B1-205ENST00000424674 IGKV3D-7A0A0C4DH55 119 aa1.97□□□□□ -2.09
SF3B1-205ENST00000424674 IGKV3OR2-268A0A0C4DH90 116 aa1.97□□□□□ -2.09
SF3B1-205ENST00000424674 C10orf142B7Z368 130 aa1.97□□□□□ -2.09
SF3B1-205ENST00000424674 D6R8Y8 96 aa1.97□□□□□ -2.09
SF3B1-205ENST00000424674 M0R2N4 97 aa1.97□□□□□ -2.09
SF3B1-205ENST00000424674 IGKV1-17P01599 117 aa1.97□□□□□ -2.09
SF3B1-205ENST00000424674 IGKV2D-40P01614 121 aaPredicted RBP1.97□□□□□ -2.09
SF3B1-205ENST00000424674 CCL18P55774 89 aa1.97□□□□□ -2.09
SF3B1-205ENST00000424674 MUSTN1Q8IVN3 82 aa1.97□□□□□ -2.09
SF3B1-205ENST00000424674 TTTY12Q9BZ98 90 aa1.97□□□□□ -2.09
SF3B1-205ENST00000424674 LINC01558Q9Y6Z2 57 aa1.97□□□□□ -2.09
SF3B1-205ENST00000424674 MED12LQ86YW9 2145 aa1.97□□□□□ -2.09
SF3B1-205ENST00000424674 TIAM1Q13009 1591 aa1.97□□□□□ -2.09
SF3B1-205ENST00000424674 URB2Q14146 1524 aaKnown RBP1.96□□□□□ -2.09
SF3B1-205ENST00000424674 AFDNP55196 1824 aaKnown RBP1.96□□□□□ -2.1
SF3B1-205ENST00000424674 TARBP1Q13395 1621 aaKnown RBP1.96□□□□□ -2.1
SF3B1-205ENST00000424674 UQCR11O14957 56 aa1.96□□□□□ -2.1
SF3B1-205ENST00000424674 GCHFRP30047 84 aa1.96□□□□□ -2.1
SF3B1-205ENST00000424674 RPL37AP61513 92 aaKnown RBP1.96□□□□□ -2.1
SF3B1-205ENST00000424674 ATP5EP2Q5VTU8 51 aa1.96□□□□□ -2.1
SF3B1-205ENST00000424674 BAGE2Q86Y30 109 aa1.96□□□□□ -2.1
SF3B1-205ENST00000424674 SIP14410 1827 aa1.96□□□□□ -2.1
SF3B1-205ENST00000424674 ZGRF1Q86YA3 2104 aa1.96□□□□□ -2.1
SF3B1-205ENST00000424674 DIDO1Q9BTC0 2240 aaKnown RBP1.95□□□□□ -2.1
SF3B1-205ENST00000424674 MYOFQ9NZM1 2061 aa1.95□□□□□ -2.1
SF3B1-205ENST00000424674 KDM3BQ7LBC6 1761 aa1.95□□□□□ -2.1
SF3B1-205ENST00000424674 MRC1P22897 1456 aa1.95□□□□□ -2.1
SF3B1-205ENST00000424674 MICAL3Q7RTP6 2002 aa1.95□□□□□ -2.1
SF3B1-205ENST00000424674 RGPD1P0DJD0 1748 aa1.95□□□□□ -2.1
SF3B1-205ENST00000424674 LOC110117498A0A087WWA1 95 aa1.95□□□□□ -2.1
SF3B1-205ENST00000424674 IFI27P40305 119 aaPredicted RBP1.95□□□□□ -2.1
SF3B1-205ENST00000424674 COA5Q86WW8 74 aa1.95□□□□□ -2.1
SF3B1-205ENST00000424674 BAGE3Q86Y29 109 aa1.95□□□□□ -2.1
SF3B1-205ENST00000424674 ZNF563Q8TA94 476 aa1.95□□□□□ -2.1
SF3B1-205ENST00000424674 TXNDC17Q9BRA2 123 aa1.95□□□□□ -2.1
SF3B1-205ENST00000424674 PRR15LQ9BU68 103 aa1.95□□□□□ -2.1
SF3B1-205ENST00000424674 EXPH5Q8NEV8 1989 aa1.95□□□□□ -2.1
SF3B1-205ENST00000424674 COL4A2P08572 1712 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 CTTNBP2Q8WZ74 1663 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 CACNA1DQ01668 2161 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 TRBV6-5A0A0K0K1A5 114 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 NBDYA0A0U1RRE5 68 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 M0R135 149 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 IGLV3-19P01714 112 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 MGPP08493 103 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 FXYD3Q14802 87 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 HCP5Q6MZN7 132 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 IGFL1Q6UW32 110 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 C5orf56Q8N8D9 126 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 WFDC6Q9BQY6 131 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 LINC00846Q9NV44 126 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 UBE2D4Q9Y2X8 147 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 SNURFQ9Y675 71 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 ASXL1Q8IXJ9 1541 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 DLEC1Q9Y238 1755 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 C1orf167Q5SNV9 1468 aa1.94□□□□□ -2.1
SF3B1-205ENST00000424674 NUMA1Q14980 2115 aa1.93□□□□□ -2.1
SF3B1-205ENST00000424674 ABCA9Q8IUA7 1624 aa1.93□□□□□ -2.1
SF3B1-205ENST00000424674 CTXND1A0A1B0GTU2 59 aa1.93□□□□□ -2.1
SF3B1-205ENST00000424674 FXYD4P59646 89 aa1.93□□□□□ -2.1
SF3B1-205ENST00000424674 SEC16AO15027 2179 aa1.93□□□□□ -2.1
SF3B1-205ENST00000424674 BTAF1O14981 1849 aa1.93□□□□□ -2.1
SF3B1-205ENST00000424674 DLG5Q8TDM6 1919 aa1.93□□□□□ -2.1
SF3B1-205ENST00000424674 CEP192Q8TEP8 1941 aa1.93□□□□□ -2.1
SF3B1-205ENST00000424674 MPDZO75970 2070 aa1.92□□□□□ -2.1
SF3B1-205ENST00000424674 IGKV2-29A2NJV5 120 aaPredicted RBP1.92□□□□□ -2.1
SF3B1-205ENST00000424674 C3orf79P0CE67 100 aa1.92□□□□□ -2.1
SF3B1-205ENST00000424674 SPINT3P49223 89 aa1.92□□□□□ -2.1
SF3B1-205ENST00000424674 NKTRP30414 1462 aaKnown RBP1.92□□□□□ -2.1
SF3B1-205ENST00000424674 ADGRB2O60241 1585 aa1.92□□□□□ -2.1
SF3B1-205ENST00000424674 PLXNC1O60486 1568 aa1.92□□□□□ -2.1
SF3B1-205ENST00000424674 CCDC180Q9P1Z9 1646 aa1.91□□□□□ -2.1
SF3B1-205ENST00000424674 COL5A3P25940 1745 aaPredicted RBP1.91□□□□□ -2.1
SF3B1-205ENST00000424674 ARFGEF2Q9Y6D5 1785 aa1.91□□□□□ -2.1
SF3B1-205ENST00000424674 RREB1Q92766 1687 aa1.91□□□□□ -2.1
SF3B1-205ENST00000424674 ARHGEF5Q12774 1597 aa1.91□□□□□ -2.1
SF3B1-205ENST00000424674 M0R3E3 92 aa1.91□□□□□ -2.1
SF3B1-205ENST00000424674 IL9P15248 144 aa1.91□□□□□ -2.1
SF3B1-205ENST00000424674 COX17Q14061 63 aa1.91□□□□□ -2.1
SF3B1-205ENST00000424674 GDF5OSQ5U4N7 250 aa1.91□□□□□ -2.1
SF3B1-205ENST00000424674 SMIM4Q8WVI0 70 aa1.91□□□□□ -2.1
SF3B1-205ENST00000424674 ZNF625Q96I27 306 aaPredicted RBP1.91□□□□□ -2.1
SF3B1-205ENST00000424674 PROK2Q9HC23 129 aa1.91□□□□□ -2.1
SF3B1-205ENST00000424674 CUL9Q8IWT3 2517 aa1.91□□□□□ -2.1
SF3B1-205ENST00000424674 HEATR1Q9H583 2144 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms