RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 IGIPA6NJ69 53 aa9.12□□□□□ -0.95
PRPF39-202ENST00000424478 SPATA12Q7Z6I5 190 aa9.12□□□□□ -0.95
PRPF39-202ENST00000424478 LINC00269Q8N2A0 174 aa9.12□□□□□ -0.95
PRPF39-202ENST00000424478 MRPS16Q9Y3D3 137 aaKnown RBP9.12□□□□□ -0.95
PRPF39-202ENST00000424478 IGLV4-3A0A075B6K6 122 aa9.12□□□□□ -0.95
PRPF39-202ENST00000424478 SIVA1O15304 175 aa9.12□□□□□ -0.95
PRPF39-202ENST00000424478 OR5A1Q8NGJ0 315 aa9.11□□□□□ -0.95
PRPF39-202ENST00000424478 Q9HAA7 133 aa9.11□□□□□ -0.95
PRPF39-202ENST00000424478 DNAH2Q9P225 4427 aa9.11□□□□□ -0.95
PRPF39-202ENST00000424478 C3orf84H3BNL1 204 aa9.1□□□□□ -0.95
PRPF39-202ENST00000424478 TRAV13-1A0A0B4J241 112 aa9.1□□□□□ -0.95
PRPF39-202ENST00000424478 KRTDAPP60985 99 aa9.1□□□□□ -0.95
PRPF39-202ENST00000424478 TMEM97Q5BJF2 176 aa9.1□□□□□ -0.95
PRPF39-202ENST00000424478 K7EMI3 77 aa9.09□□□□□ -0.95
PRPF39-202ENST00000424478 ERASQ7Z444 233 aa9.09□□□□□ -0.95
PRPF39-202ENST00000424478 BAALCQ8WXS3 180 aa9.09□□□□□ -0.95
PRPF39-202ENST00000424478 UBE2WQ96B02 151 aa9.09□□□□□ -0.95
PRPF39-202ENST00000424478 IFI27L1Q96BM0 104 aa9.09□□□□□ -0.95
PRPF39-202ENST00000424478 CDC42SE2Q9NRR3 84 aa9.09□□□□□ -0.95
PRPF39-202ENST00000424478 PRSS1P07477 247 aa9.09□□□□□ -0.95
PRPF39-202ENST00000424478 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.08□□□□□ -0.96
PRPF39-202ENST00000424478 TIRAPP58753 221 aa9.08□□□□□ -0.96
PRPF39-202ENST00000424478 OR10D4PQ8NGN7 298 aa9.08□□□□□ -0.96
PRPF39-202ENST00000424478 ZNF664Q8N3J9 261 aa9.08□□□□□ -0.96
PRPF39-202ENST00000424478 TMEM18Q96B42 140 aa9.08□□□□□ -0.96
PRPF39-202ENST00000424478 TMEM101Q96IK0 257 aa9.08□□□□□ -0.96
PRPF39-202ENST00000424478 TCTAP57738 103 aa9.08□□□□□ -0.96
PRPF39-202ENST00000424478 C3orf79P0CE67 100 aa9.07□□□□□ -0.96
PRPF39-202ENST00000424478 Q6ZN92 141 aa9.07□□□□□ -0.96
PRPF39-202ENST00000424478 LINC00476Q8WZB0 136 aa9.07□□□□□ -0.96
PRPF39-202ENST00000424478 TMEM141Q96I45 108 aa9.07□□□□□ -0.96
PRPF39-202ENST00000424478 PACRGQ96M98 296 aaPredicted RBP9.07□□□□□ -0.96
PRPF39-202ENST00000424478 MRPL52Q86TS9 123 aaKnown RBP9.07□□□□□ -0.96
PRPF39-202ENST00000424478 ALMS1Q8TCU4 4167 aa9.07□□□□□ -0.96
PRPF39-202ENST00000424478 ENHOQ6UWT2 76 aa9.06□□□□□ -0.96
PRPF39-202ENST00000424478 SPANXA1Q9NS26 97 aa9.06□□□□□ -0.96
PRPF39-202ENST00000424478 DNAH10OSP0CZ25 163 aa9.06□□□□□ -0.96
PRPF39-202ENST00000424478 REG3AQ06141 175 aa9.06□□□□□ -0.96
PRPF39-202ENST00000424478 LINC01556Q5JQF7 62 aa9.06□□□□□ -0.96
PRPF39-202ENST00000424478 VCX2Q9H322 139 aa9.06□□□□□ -0.96
PRPF39-202ENST00000424478 ATOH7Q8N100 152 aa9.06□□□□□ -0.96
PRPF39-202ENST00000424478 UPK3BQ9BT76 320 aa9.06□□□□□ -0.96
PRPF39-202ENST00000424478 TIMM17AQ99595 171 aa9.05□□□□□ -0.96
PRPF39-202ENST00000424478 AKR1D1P51857 326 aa9.05□□□□□ -0.96
PRPF39-202ENST00000424478 TEX43Q6ZNM6 134 aa9.05□□□□□ -0.96
PRPF39-202ENST00000424478 A0A0J9YXV3 536 aa9.04□□□□□ -0.96
PRPF39-202ENST00000424478 A0A1B0GUV1 79 aa9.04□□□□□ -0.96
PRPF39-202ENST00000424478 XCL1P47992 114 aa9.04□□□□□ -0.96
PRPF39-202ENST00000424478 HSPB8Q9UJY1 196 aa9.04□□□□□ -0.96
PRPF39-202ENST00000424478 PYGO1Q9Y3Y4 419 aa9.04□□□□□ -0.96
PRPF39-202ENST00000424478 COX6A2Q02221 97 aa9.04□□□□□ -0.96
PRPF39-202ENST00000424478 CST9LQ9H4G1 147 aa9.04□□□□□ -0.96
PRPF39-202ENST00000424478 ATP5LO75964 103 aa9.04□□□□□ -0.96
PRPF39-202ENST00000424478 LGALS9CQ6DKI2 356 aa9.04□□□□□ -0.96
PRPF39-202ENST00000424478 MRPL35Q9NZE8 188 aaKnown RBP9.04□□□□□ -0.96
PRPF39-202ENST00000424478 SYS1-DBNDD2H3BUS1 97 aa9.03□□□□□ -0.96
PRPF39-202ENST00000424478 H7C423 109 aa9.03□□□□□ -0.96
PRPF39-202ENST00000424478 ZNF25P17030 456 aaPredicted RBP9.03□□□□□ -0.96
PRPF39-202ENST00000424478 MAP1LC3CQ9BXW4 147 aa9.03□□□□□ -0.96
PRPF39-202ENST00000424478 TIMM21Q9BVV7 248 aa9.03□□□□□ -0.96
PRPF39-202ENST00000424478 AMELXQ99217 191 aa9.02□□□□□ -0.96
PRPF39-202ENST00000424478 LINC00959A0A1B0GUT2 108 aa9.02□□□□□ -0.97
PRPF39-202ENST00000424478 CRPP02741 224 aa9.02□□□□□ -0.97
PRPF39-202ENST00000424478 G0S2P27469 103 aa9.02□□□□□ -0.97
PRPF39-202ENST00000424478 PMVKQ15126 192 aa9.02□□□□□ -0.97
PRPF39-202ENST00000424478 CSDC2Q9Y534 153 aaKnown RBP9.02□□□□□ -0.97
PRPF39-202ENST00000424478 FRAS1Q86XX4 4008 aa9.02□□□□□ -0.97
PRPF39-202ENST00000424478 NBDYA0A0U1RRE5 68 aa9.02□□□□□ -0.97
PRPF39-202ENST00000424478 CCL25O15444 150 aa9.02□□□□□ -0.97
PRPF39-202ENST00000424478 IGKV2D-24A0A075B6R9 120 aa9.01□□□□□ -0.97
PRPF39-202ENST00000424478 ODF1Q14990 250 aa9.01□□□□□ -0.97
PRPF39-202ENST00000424478 CDPF1Q6NVV7 123 aa9.01□□□□□ -0.97
PRPF39-202ENST00000424478 MRPS36P82909 103 aaKnown RBP9.01□□□□□ -0.97
PRPF39-202ENST00000424478 IGLV4-69A0A075B6H9 119 aa9□□□□□ -0.97
PRPF39-202ENST00000424478 LECT2O14960 151 aa9□□□□□ -0.97
PRPF39-202ENST00000424478 CHTOPQ9Y3Y2 248 aaKnown RBP9□□□□□ -0.97
PRPF39-202ENST00000424478 IGHV3-64A0A075B6Q5 118 aa9□□□□□ -0.97
PRPF39-202ENST00000424478 UBE2D1P51668 147 aa9□□□□□ -0.97
PRPF39-202ENST00000424478 LINC00242Q5T6M2 205 aa9□□□□□ -0.97
PRPF39-202ENST00000424478 C5orf38Q86SI9 138 aa9□□□□□ -0.97
PRPF39-202ENST00000424478 MAJINQ3KP22 176 aa9□□□□□ -0.97
PRPF39-202ENST00000424478 CHCHD10Q8WYQ3 142 aaPredicted RBP9□□□□□ -0.97
PRPF39-202ENST00000424478 PRR34Q9NV39 138 aa9□□□□□ -0.97
PRPF39-202ENST00000424478 LOC105371267A0A1B0GV96 52 aa8.99□□□□□ -0.97
PRPF39-202ENST00000424478 C11orf86A6NJI1 115 aa8.99□□□□□ -0.97
PRPF39-202ENST00000424478 C2orf88Q9BSF0 95 aa8.99□□□□□ -0.97
PRPF39-202ENST00000424478 RYR3Q15413 4870 aa8.99□□□□□ -0.97
PRPF39-202ENST00000424478 IBA57-AS1B1ANH7 110 aa8.98□□□□□ -0.97
PRPF39-202ENST00000424478 SCGB1D1O95968 90 aa8.98□□□□□ -0.97
PRPF39-202ENST00000424478 MAPKAPK5-AS1Q8N8E1 139 aa8.98□□□□□ -0.97
PRPF39-202ENST00000424478 CHAC1Q9BUX1 264 aa8.98□□□□□ -0.97
PRPF39-202ENST00000424478 GAGE12HA6NDE8 117 aa8.98□□□□□ -0.97
PRPF39-202ENST00000424478 RYR2Q92736 4967 aa8.98□□□□□ -0.97
PRPF39-202ENST00000424478 LINC00526Q96FQ7 95 aa8.98□□□□□ -0.97
PRPF39-202ENST00000424478 CDKN2A-AS1Q9UH64 79 aa8.98□□□□□ -0.97
PRPF39-202ENST00000424478 SMAGPQ0VAQ4 97 aa8.96□□□□□ -0.97
PRPF39-202ENST00000424478 TMEM170BQ5T4T1 132 aa8.96□□□□□ -0.97
PRPF39-202ENST00000424478 LINC00469Q8N7U9 141 aa8.96□□□□□ -0.97
PRPF39-202ENST00000424478 TRAV9-2A0A087WT02 112 aa8.96□□□□□ -0.98
PRPF39-202ENST00000424478 SS18Q15532 418 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms