RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 HIST1H2BCP62807 126 aa11.79□□□□□ -0.52
LINC00271-201ENST00000421378 REG3AQ06141 175 aa11.79□□□□□ -0.52
LINC00271-201ENST00000421378 HIST2H2BEQ16778 126 aa11.79□□□□□ -0.52
LINC00271-201ENST00000421378 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.79□□□□□ -0.52
LINC00271-201ENST00000421378 HIST1H2BHQ93079 126 aa11.79□□□□□ -0.52
LINC00271-201ENST00000421378 CHCHD1Q96BP2 118 aaKnown RBP11.79□□□□□ -0.52
LINC00271-201ENST00000421378 HIST1H2BNQ99877 126 aa11.79□□□□□ -0.52
LINC00271-201ENST00000421378 HIST1H2BMQ99879 126 aa11.79□□□□□ -0.52
LINC00271-201ENST00000421378 ENHOQ6UWT2 76 aa11.78□□□□□ -0.52
LINC00271-201ENST00000421378 NFE4Q86UQ8 179 aa11.78□□□□□ -0.52
LINC00271-201ENST00000421378 ZNF664Q8N3J9 261 aa11.78□□□□□ -0.52
LINC00271-201ENST00000421378 TOMM6Q96B49 74 aa11.78□□□□□ -0.52
LINC00271-201ENST00000421378 CDC42SE2Q9NRR3 84 aa11.78□□□□□ -0.52
LINC00271-201ENST00000421378 MIAQ16674 131 aa11.77□□□□□ -0.53
LINC00271-201ENST00000421378 PYGO1Q9Y3Y4 419 aa11.77□□□□□ -0.53
LINC00271-201ENST00000421378 LINC01549A6NIU2 74 aa11.76□□□□□ -0.53
LINC00271-201ENST00000421378 C1orf196B1AJZ1 125 aa11.76□□□□□ -0.53
LINC00271-201ENST00000421378 Q6ZUT4 128 aa11.76□□□□□ -0.53
LINC00271-201ENST00000421378 RYR3Q15413 4870 aa11.75□□□□□ -0.53
LINC00271-201ENST00000421378 IGKV3OR2-268A0A0C4DH90 116 aa11.75□□□□□ -0.53
LINC00271-201ENST00000421378 HBDP02042 147 aa11.75□□□□□ -0.53
LINC00271-201ENST00000421378 PMCHL1Q16048 86 aa11.75□□□□□ -0.53
LINC00271-201ENST00000421378 A0A096LNJ9 63 aa11.75□□□□□ -0.53
LINC00271-201ENST00000421378 HSBP1O75506 76 aa11.75□□□□□ -0.53
LINC00271-201ENST00000421378 SERF1AO75920 110 aa11.75□□□□□ -0.53
LINC00271-201ENST00000421378 MRPS36P82909 103 aaKnown RBP11.75□□□□□ -0.53
LINC00271-201ENST00000421378 RNASE13Q5GAN3 156 aaKnown RBP11.75□□□□□ -0.53
LINC00271-201ENST00000421378 RMI2Q96E14 147 aa11.75□□□□□ -0.53
LINC00271-201ENST00000421378 OPRPNQ99935 248 aaPredicted RBP11.75□□□□□ -0.53
LINC00271-201ENST00000421378 IGIPA6NJ69 53 aa11.74□□□□□ -0.53
LINC00271-201ENST00000421378 TIMM17AQ99595 171 aa11.74□□□□□ -0.53
LINC00271-201ENST00000421378 C1orf43Q9BWL3 253 aa11.74□□□□□ -0.53
LINC00271-201ENST00000421378 DNAH2Q9P225 4427 aa11.73□□□□□ -0.53
LINC00271-201ENST00000421378 IGLV4-3A0A075B6K6 122 aa11.73□□□□□ -0.53
LINC00271-201ENST00000421378 IGKV2D-24A0A075B6R9 120 aa11.73□□□□□ -0.53
LINC00271-201ENST00000421378 NPSP0C0P6 89 aa11.73□□□□□ -0.53
LINC00271-201ENST00000421378 LINC00310P59036 64 aa11.73□□□□□ -0.53
LINC00271-201ENST00000421378 Q6ZRN7 208 aaPredicted RBP11.73□□□□□ -0.53
LINC00271-201ENST00000421378 ERASQ7Z444 233 aa11.73□□□□□ -0.53
LINC00271-201ENST00000421378 FAM104AQ969W3 186 aa11.73□□□□□ -0.53
LINC00271-201ENST00000421378 TMEM141Q96I45 108 aa11.73□□□□□ -0.53
LINC00271-201ENST00000421378 SCGB3A1Q96QR1 104 aa11.73□□□□□ -0.53
LINC00271-201ENST00000421378 IGLV10-54A0A075B6I4 117 aa11.72□□□□□ -0.53
LINC00271-201ENST00000421378 TRAV8-4A0A0B4J246 113 aa11.72□□□□□ -0.53
LINC00271-201ENST00000421378 Q6ZN92 141 aa11.72□□□□□ -0.53
LINC00271-201ENST00000421378 TM2D2Q9BX73 214 aa11.72□□□□□ -0.53
LINC00271-201ENST00000421378 COX11Q9Y6N1 276 aa11.72□□□□□ -0.53
LINC00271-201ENST00000421378 RTL8CO15255 209 aa11.71□□□□□ -0.53
LINC00271-201ENST00000421378 PSCAO43653 123 aa11.71□□□□□ -0.53
LINC00271-201ENST00000421378 PAPPA-AS1Q5QFB9 102 aa11.71□□□□□ -0.54
LINC00271-201ENST00000421378 TEX43Q6ZNM6 134 aa11.71□□□□□ -0.54
LINC00271-201ENST00000421378 LINC00959A0A1B0GUT2 108 aa11.7□□□□□ -0.54
LINC00271-201ENST00000421378 FAM19A2Q8N3H0 131 aa11.7□□□□□ -0.54
LINC00271-201ENST00000421378 DNAH10Q8IVF4 4471 aa11.69□□□□□ -0.54
LINC00271-201ENST00000421378 TRAV13-1A0A0B4J241 112 aa11.69□□□□□ -0.54
LINC00271-201ENST00000421378 VCX2Q9H322 139 aa11.69□□□□□ -0.54
LINC00271-201ENST00000421378 IFITM10A6NMD0 228 aa11.68□□□□□ -0.54
LINC00271-201ENST00000421378 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.68□□□□□ -0.54
LINC00271-201ENST00000421378 NUPR1O60356 82 aa11.68□□□□□ -0.54
LINC00271-201ENST00000421378 SS18Q15532 418 aa11.68□□□□□ -0.54
LINC00271-201ENST00000421378 PDZD11Q5EBL8 140 aa11.68□□□□□ -0.54
LINC00271-201ENST00000421378 C2orf88Q9BSF0 95 aa11.68□□□□□ -0.54
LINC00271-201ENST00000421378 FRAS1Q86XX4 4008 aa11.68□□□□□ -0.54
LINC00271-201ENST00000421378 CHCHD10Q8WYQ3 142 aaPredicted RBP11.67□□□□□ -0.54
LINC00271-201ENST00000421378 AMELXQ99217 191 aa11.67□□□□□ -0.54
LINC00271-201ENST00000421378 CCL25O15444 150 aa11.67□□□□□ -0.54
LINC00271-201ENST00000421378 ATP5LO75964 103 aa11.67□□□□□ -0.54
LINC00271-201ENST00000421378 LINC00336Q6ZUF6 198 aa11.67□□□□□ -0.54
LINC00271-201ENST00000421378 LINC00173Q6ZV60 143 aa11.67□□□□□ -0.54
LINC00271-201ENST00000421378 XCL1P47992 114 aa11.66□□□□□ -0.54
LINC00271-201ENST00000421378 NDUFA6P56556 154 aa11.66□□□□□ -0.54
LINC00271-201ENST00000421378 COA6Q5JTJ3 125 aaKnown RBP11.66□□□□□ -0.54
LINC00271-201ENST00000421378 ZC2HC1BQ5TFG8 222 aa11.66□□□□□ -0.54
LINC00271-201ENST00000421378 KRTAP26-1Q6PEX3 210 aa11.65□□□□□ -0.54
LINC00271-201ENST00000421378 MAPKAPK5-AS1Q8N8E1 139 aa11.65□□□□□ -0.54
LINC00271-201ENST00000421378 BAALCQ8WXS3 180 aa11.65□□□□□ -0.54
LINC00271-201ENST00000421378 PRSS29PA6NIE9 313 aa11.64□□□□□ -0.55
LINC00271-201ENST00000421378 TNP2Q05952 138 aa11.64□□□□□ -0.55
LINC00271-201ENST00000421378 GAGE12HA6NDE8 117 aa11.63□□□□□ -0.55
LINC00271-201ENST00000421378 LEPROTL1O95214 131 aa11.63□□□□□ -0.55
LINC00271-201ENST00000421378 UBE2D1P51668 147 aa11.62□□□□□ -0.55
LINC00271-201ENST00000421378 PMVKQ15126 192 aa11.62□□□□□ -0.55
LINC00271-201ENST00000421378 CD164L2Q6UWJ8 174 aa11.62□□□□□ -0.55
LINC00271-201ENST00000421378 IFI27L1Q96BM0 104 aa11.62□□□□□ -0.55
LINC00271-201ENST00000421378 CST9LQ9H4G1 147 aa11.62□□□□□ -0.55
LINC00271-201ENST00000421378 DNAH17Q9UFH2 4485 aa11.61□□□□□ -0.55
LINC00271-201ENST00000421378 FOXI1Q12951 378 aa11.61□□□□□ -0.55
LINC00271-201ENST00000421378 HSPB8Q9UJY1 196 aa11.61□□□□□ -0.55
LINC00271-201ENST00000421378 A0A087WTM6 91 aa11.6□□□□□ -0.55
LINC00271-201ENST00000421378 LRCOL1A6NCL2 159 aa11.6□□□□□ -0.55
LINC00271-201ENST00000421378 FABP4P15090 132 aa11.6□□□□□ -0.55
LINC00271-201ENST00000421378 LINC00242Q5T6M2 205 aa11.6□□□□□ -0.55
LINC00271-201ENST00000421378 FAT2Q9NYQ8 4349 aa11.6□□□□□ -0.55
LINC00271-201ENST00000421378 LECT2O14960 151 aa11.59□□□□□ -0.55
LINC00271-201ENST00000421378 S100A6P06703 90 aa11.59□□□□□ -0.55
LINC00271-201ENST00000421378 PRSS1P07477 247 aa11.59□□□□□ -0.55
LINC00271-201ENST00000421378 SEC11AP67812 179 aa11.58□□□□□ -0.55
LINC00271-201ENST00000421378 IGHV3OR16-9A0A0B4J2B5 98 aa11.58□□□□□ -0.56
LINC00271-201ENST00000421378 COX7A2LO14548 114 aa11.58□□□□□ -0.56
LINC00271-201ENST00000421378 EREGO14944 169 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms