RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 HIGD2AQ9BW72 106 aa6.25□□□□□ -1.41
UBR4-206ENST00000419533 AVPP01185 164 aa6.25□□□□□ -1.41
UBR4-206ENST00000419533 RBM3P98179 157 aaKnown RBP6.25□□□□□ -1.41
UBR4-206ENST00000419533 M0QY20 66 aa6.25□□□□□ -1.41
UBR4-206ENST00000419533 MP68P56378 58 aa6.25□□□□□ -1.41
UBR4-206ENST00000419533 HIST2H2BDQ6DRA6 164 aa6.24□□□□□ -1.41
UBR4-206ENST00000419533 Q6ZS46 218 aa6.24□□□□□ -1.41
UBR4-206ENST00000419533 A0A0B4J2C4 111 aa6.24□□□□□ -1.41
UBR4-206ENST00000419533 FAM19A1Q7Z5A9 133 aa6.24□□□□□ -1.41
UBR4-206ENST00000419533 CCDC168Q8NDH2 2452 aa6.24□□□□□ -1.41
UBR4-206ENST00000419533 SYCNQ0VAF6 134 aa6.24□□□□□ -1.41
UBR4-206ENST00000419533 LELP1Q5T871 98 aa6.24□□□□□ -1.41
UBR4-206ENST00000419533 A0A1B0GX51 115 aa6.23□□□□□ -1.41
UBR4-206ENST00000419533 LY6G6CO95867 125 aa6.23□□□□□ -1.41
UBR4-206ENST00000419533 OXLD1Q5BKU9 147 aa6.23□□□□□ -1.41
UBR4-206ENST00000419533 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.23□□□□□ -1.41
UBR4-206ENST00000419533 IGHV4-30-4P0DP06 118 aa6.23□□□□□ -1.41
UBR4-206ENST00000419533 C16orf95Q9H693 158 aa6.23□□□□□ -1.41
UBR4-206ENST00000419533 IBA57-AS1B1ANH7 110 aa6.23□□□□□ -1.41
UBR4-206ENST00000419533 CHKB-CPT1BH3BT56 60 aa6.23□□□□□ -1.41
UBR4-206ENST00000419533 WFDC10AQ9H1F0 79 aa6.23□□□□□ -1.41
UBR4-206ENST00000419533 IGLV4-3A0A075B6K6 122 aa6.23□□□□□ -1.41
UBR4-206ENST00000419533 A0A0J9YXY3 114 aa6.23□□□□□ -1.41
UBR4-206ENST00000419533 NCOA6Q14686 2063 aaPredicted RBP6.22□□□□□ -1.41
UBR4-206ENST00000419533 IGLV2-18A0A075B6J9 118 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 LRCOL1A6NCL2 159 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 NUPR2A6NF83 97 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 NACAE9PAV3 2078 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 KLLNB2CW77 178 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 CHD9Q3L8U1 2897 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 MYO18BQ8IUG5 2567 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 PCSK5Q92824 1860 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 DNAH12Q6ZR08 3092 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 FAM236AA0A1B0GUQ0 79 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 FAM236BA0A1B0GV22 79 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 CDKN2A-AS1Q9UH64 79 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 CSPG4Q6UVK1 2322 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 A0A0J9YWU9 116 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 TRBV10-2A0A0K0K1G8 114 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 H0Y9J4 135 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 J3KT08 172 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 ATOX1O00244 68 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 DCANP1Q8TF63 244 aa6.22□□□□□ -1.41
UBR4-206ENST00000419533 TRBV6-5A0A0K0K1A5 114 aa6.21□□□□□ -1.41
UBR4-206ENST00000419533 H3BT86 120 aa6.21□□□□□ -1.41
UBR4-206ENST00000419533 SPANXB1Q9NS25 103 aaPredicted RBP6.21□□□□□ -1.41
UBR4-206ENST00000419533 FAM19A5Q7Z5A7 132 aaPredicted RBP6.21□□□□□ -1.42
UBR4-206ENST00000419533 CLEC2BQ92478 149 aa6.21□□□□□ -1.42
UBR4-206ENST00000419533 TP73-AS1Q9UF72 201 aa6.21□□□□□ -1.42
UBR4-206ENST00000419533 M0R2N4 97 aa6.21□□□□□ -1.42
UBR4-206ENST00000419533 CRIP1P50238 77 aa6.21□□□□□ -1.42
UBR4-206ENST00000419533 PYGO1Q9Y3Y4 419 aa6.21□□□□□ -1.42
UBR4-206ENST00000419533 CRIP2P52943 208 aaPredicted RBP6.21□□□□□ -1.42
UBR4-206ENST00000419533 CD164L2Q6UWJ8 174 aa6.21□□□□□ -1.42
UBR4-206ENST00000419533 TMEM223A0PJW6 202 aa6.2□□□□□ -1.42
UBR4-206ENST00000419533 PRB2P02812 416 aaPredicted RBP6.2□□□□□ -1.42
UBR4-206ENST00000419533 PROK1P58294 105 aa6.2□□□□□ -1.42
UBR4-206ENST00000419533 PIK3CD-AS1Q5SR53 167 aa6.2□□□□□ -1.42
UBR4-206ENST00000419533 TRBV27A0A0K0K1C4 114 aa6.2□□□□□ -1.42
UBR4-206ENST00000419533 ZNF22P17026 224 aaPredicted RBP6.2□□□□□ -1.42
UBR4-206ENST00000419533 NANOS2P60321 138 aaKnown RBP6.2□□□□□ -1.42
UBR4-206ENST00000419533 MRGPRG-AS1Q2M3A8 158 aa6.2□□□□□ -1.42
UBR4-206ENST00000419533 Q8N976 141 aa6.2□□□□□ -1.42
UBR4-206ENST00000419533 PTH2Q96A98 100 aa6.2□□□□□ -1.42
UBR4-206ENST00000419533 CLUHP3Q96NS8 147 aa6.2□□□□□ -1.42
UBR4-206ENST00000419533 ZFYVE26Q68DK2 2539 aa6.2□□□□□ -1.42
UBR4-206ENST00000419533 C9orf85Q96MD7 179 aa6.2□□□□□ -1.42
UBR4-206ENST00000419533 ZNF580Q9UK33 172 aa6.19□□□□□ -1.42
UBR4-206ENST00000419533 ZNF706Q9Y5V0 76 aaPredicted RBP6.19□□□□□ -1.42
UBR4-206ENST00000419533 IGLV4-69A0A075B6H9 119 aa6.19□□□□□ -1.42
UBR4-206ENST00000419533 IGLV2-11P01706 119 aa6.19□□□□□ -1.42
UBR4-206ENST00000419533 RNASE3P12724 160 aaKnown RBP6.19□□□□□ -1.42
UBR4-206ENST00000419533 U3KQK5 164 aa6.19□□□□□ -1.42
UBR4-206ENST00000419533 IGLV1-51P01701 117 aa6.19□□□□□ -1.42
UBR4-206ENST00000419533 CHD7Q9P2D1 2997 aa6.19□□□□□ -1.42
UBR4-206ENST00000419533 RNF185Q96GF1 192 aa6.19□□□□□ -1.42
UBR4-206ENST00000419533 LINC00474Q9P2X8 69 aa6.19□□□□□ -1.42
UBR4-206ENST00000419533 LOC107984640A0A0U1RRK4 108 aa6.18□□□□□ -1.42
UBR4-206ENST00000419533 UBE2D1P51668 147 aa6.18□□□□□ -1.42
UBR4-206ENST00000419533 NAV3Q8IVL0 2385 aa6.18□□□□□ -1.42
UBR4-206ENST00000419533 MT-ATP8P03928 68 aa6.18□□□□□ -1.42
UBR4-206ENST00000419533 IGKV3D-7A0A0C4DH55 119 aa6.18□□□□□ -1.42
UBR4-206ENST00000419533 DOPEY1Q5JWR5 2465 aa6.18□□□□□ -1.42
UBR4-206ENST00000419533 CENPFP49454 3210 aa6.18□□□□□ -1.42
UBR4-206ENST00000419533 BRI3O95415 125 aa6.18□□□□□ -1.42
UBR4-206ENST00000419533 TCL1BO95988 128 aa6.17□□□□□ -1.42
UBR4-206ENST00000419533 NDUFV3P56181 108 aaKnown RBP6.17□□□□□ -1.42
UBR4-206ENST00000419533 TMEM258P61165 79 aa6.17□□□□□ -1.42
UBR4-206ENST00000419533 TNCP24821 2201 aa6.17□□□□□ -1.42
UBR4-206ENST00000419533 PRR9Q5T870 116 aa6.17□□□□□ -1.42
UBR4-206ENST00000419533 XAGE1AQ9HD64 81 aa6.17□□□□□ -1.42
UBR4-206ENST00000419533 TSHBP01222 138 aa6.17□□□□□ -1.42
UBR4-206ENST00000419533 ODF3L2Q3SX64 289 aa6.17□□□□□ -1.42
UBR4-206ENST00000419533 LOC100131303A0A0U1RQF7 123 aa6.17□□□□□ -1.42
UBR4-206ENST00000419533 LINC00959A0A1B0GUT2 108 aa6.16□□□□□ -1.42
UBR4-206ENST00000419533 MRPS36P82909 103 aaKnown RBP6.16□□□□□ -1.42
UBR4-206ENST00000419533 TRANK1O15050 2925 aa6.16□□□□□ -1.42
UBR4-206ENST00000419533 LINC00308Q8TCZ7 52 aa6.16□□□□□ -1.42
UBR4-206ENST00000419533 PRR14LQ5THK1 2151 aa6.16□□□□□ -1.42
UBR4-206ENST00000419533 A0A096LNI7 61 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms