RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 C4orf3Q8WVX3 66 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 ODF3Q96PU9 254 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 DPY30Q9C005 99 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 LAMA2P24043 3122 aaKnown RBP1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 CEP192Q8TEP8 1941 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 MED12LQ86YW9 2145 aa1.18□□□□□ -2.22
HMGB1P49-201ENST00000418882 PDE4DIPQ5VU43 2346 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 LOC110117498A0A087WWA1 95 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 TRAV1-2A0A0B4J238 106 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 A0A0J9YY99 117 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 C20orf202A1L168 122 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 TMEM218A2RU14 115 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 NAP1L6A6NFF2 107 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 SNRPGP15A8MWD9 76 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 LOC730098B7Z3J9 87 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 M0R2N4 97 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 INE1O15225 51 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 S100A3P33764 101 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 RPL38P63173 70 aaKnown RBP1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 RHOHQ15669 191 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 OR2T2Q6IF00 324 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 TSKUQ8WUA8 353 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 SMIM4Q8WVI0 70 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 TCEAL7Q9BRU2 100 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 HEATR1Q9H583 2144 aaKnown RBP1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 TMEM242Q9NWH2 141 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 SERP1Q9Y6X1 66 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 SDK1Q7Z5N4 2213 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 PCDH15Q96QU1 1955 aa1.17□□□□□ -2.22
HMGB1P49-201ENST00000418882 EXPH5Q8NEV8 1989 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 TRBV6-7A0A0A0MS04 114 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 TMEM30CPA0ZSE6 113 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 NUPR2A6NF83 97 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 JMJD7-PLA2G4BH0Y9G9 81 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 GEMIN2O14893 280 aaKnown RBP1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 DNAL4O96015 105 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 APOC3P02656 99 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 IL9P15248 144 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 GNG4P50150 75 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 CAV3P56539 151 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 SMIM11AP58511 58 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 UBE2G1P62253 170 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 UBA52P62987 128 aaKnown RBP1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 MRPS10P82664 201 aaKnown RBP1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 MPV17LQ2QL34 196 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 Q56UQ5 140 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 Q6AWC8 147 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 ALKAL2Q6UX46 152 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 SMIM5Q71RC9 77 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 SVBPQ8N300 66 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 TOMM5Q8N4H5 51 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 Q8N8P6 123 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 OBSCN-AS1Q96MR7 158 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 DSCR8Q96T75 97 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 WFDC10AQ9H1F0 79 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 NAA60Q9H7X0 242 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 MRPL36Q9P0J6 103 aaKnown RBP1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 ABRACLQ9P1F3 81 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 ESPL1Q14674 2120 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 UTRNP46939 3433 aa1.16□□□□□ -2.22
HMGB1P49-201ENST00000418882 TET1Q8NFU7 2136 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 USF3Q68DE3 2245 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 CCL22O00626 93 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 NDUFB6O95139 128 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 TNFP01375 233 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 HMGA1P17096 107 aaKnown RBP1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 PDE6GP18545 87 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 DEFA5Q01523 94 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 SSBP1Q04837 148 aaKnown RBP1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 INSL4Q14641 139 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 PEA15Q15121 130 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 HMGN3Q15651 99 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 S100A7L2Q5SY68 101 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 ACBD7Q8N6N7 88 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 ZNF563Q8TA94 476 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 LCN9Q8WX39 176 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 SPTSSAQ969W0 71 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 SMCO4Q9NRQ5 59 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 C22orf24Q9Y442 160 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 IER3IP1Q9Y5U9 82 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 COL4A6Q14031 1691 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 USP34Q70CQ2 3546 aa1.15□□□□□ -2.23
HMGB1P49-201ENST00000418882 HTTP42858 3142 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 CNTRLQ7Z7A1 2325 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 TRAV23DV6A0A075B6W5 121 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 A0A087WWC5 75 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 FXYD6-FXYD2A0A087WZ82 144 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 KANTRA0A1W2PQU2 76 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 A6NIN4 97 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 HMGN4O00479 90 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 PIN1P1O15428 100 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 SIX6O95475 246 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 IGHV3-30P01768 117 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 IGHV3-30-5P0DP03 117 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 FAUP35544 74 aaKnown RBP1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 FXYD6P3P58550 94 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 TPPP2P59282 170 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 NPC2P61916 151 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 PKIAP61925 76 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 PYY3Q5JQD4 70 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms