RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 KNCNA6PVL3 124 aa9.34□□□□□ -0.91
LRRTM1-205ENST00000417012 H3BT86 120 aa9.34□□□□□ -0.91
LRRTM1-205ENST00000417012 CRLF1O75462 422 aa9.34□□□□□ -0.91
LRRTM1-205ENST00000417012 Q6YL49 198 aa9.34□□□□□ -0.91
LRRTM1-205ENST00000417012 C18orf65Q6ZTR6 163 aa9.34□□□□□ -0.91
LRRTM1-205ENST00000417012 DUX3Q96PT4 197 aa9.34□□□□□ -0.91
LRRTM1-205ENST00000417012 UBE2D4Q9Y2X8 147 aa9.34□□□□□ -0.91
LRRTM1-205ENST00000417012 NOTCH3Q9UM47 2321 aa9.34□□□□□ -0.91
LRRTM1-205ENST00000417012 ITPR3Q14573 2671 aa9.34□□□□□ -0.91
LRRTM1-205ENST00000417012 H7C423 109 aa9.33□□□□□ -0.92
LRRTM1-205ENST00000417012 HOXD3P31249 432 aaPredicted RBP9.33□□□□□ -0.92
LRRTM1-205ENST00000417012 DEFB136Q30KP8 78 aa9.33□□□□□ -0.92
LRRTM1-205ENST00000417012 ZNF702PQ9H963 129 aa9.33□□□□□ -0.92
LRRTM1-205ENST00000417012 TENM4Q6N022 2769 aa9.33□□□□□ -0.92
LRRTM1-205ENST00000417012 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.33□□□□□ -0.92
LRRTM1-205ENST00000417012 IGKV2-29A2NJV5 120 aaPredicted RBP9.33□□□□□ -0.92
LRRTM1-205ENST00000417012 A8MZ25 164 aa9.33□□□□□ -0.92
LRRTM1-205ENST00000417012 NDUFV3P56181 108 aaKnown RBP9.33□□□□□ -0.92
LRRTM1-205ENST00000417012 TMEM61Q8N0U2 210 aa9.33□□□□□ -0.92
LRRTM1-205ENST00000417012 Q96MF0 132 aa9.33□□□□□ -0.92
LRRTM1-205ENST00000417012 CHCHD7Q9BUK0 85 aa9.33□□□□□ -0.92
LRRTM1-205ENST00000417012 ZNF415Q09FC8 603 aa9.32□□□□□ -0.92
LRRTM1-205ENST00000417012 DEFB113Q30KQ7 82 aa9.32□□□□□ -0.92
LRRTM1-205ENST00000417012 Q6Q795 121 aa9.32□□□□□ -0.92
LRRTM1-205ENST00000417012 C15orf53Q8NAA6 179 aa9.32□□□□□ -0.92
LRRTM1-205ENST00000417012 DEFB131AP59861 70 aa9.31□□□□□ -0.92
LRRTM1-205ENST00000417012 Q6ZSV7 163 aa9.31□□□□□ -0.92
LRRTM1-205ENST00000417012 CLEC2BQ92478 149 aa9.31□□□□□ -0.92
LRRTM1-205ENST00000417012 TIMM17BO60830 172 aa9.31□□□□□ -0.92
LRRTM1-205ENST00000417012 FSHBP01225 129 aa9.31□□□□□ -0.92
LRRTM1-205ENST00000417012 IFITM1P13164 125 aa9.31□□□□□ -0.92
LRRTM1-205ENST00000417012 LST1O00453 97 aa9.31□□□□□ -0.92
LRRTM1-205ENST00000417012 NHLRC4P0CG21 123 aaPredicted RBP9.31□□□□□ -0.92
LRRTM1-205ENST00000417012 PIK3CD-AS1Q5SR53 167 aa9.31□□□□□ -0.92
LRRTM1-205ENST00000417012 LINC00467Q9BRT7 94 aa9.31□□□□□ -0.92
LRRTM1-205ENST00000417012 CHD6Q8TD26 2715 aa9.3□□□□□ -0.92
LRRTM1-205ENST00000417012 HIST2H2BCQ6DN03 193 aa9.3□□□□□ -0.92
LRRTM1-205ENST00000417012 Q9UF83 564 aa9.3□□□□□ -0.92
LRRTM1-205ENST00000417012 MEIG1Q5JSS6 88 aa9.3□□□□□ -0.92
LRRTM1-205ENST00000417012 Q6ZSN1 163 aa9.3□□□□□ -0.92
LRRTM1-205ENST00000417012 FLNAP21333 2647 aaKnown RBP9.3□□□□□ -0.92
LRRTM1-205ENST00000417012 WNK1Q9H4A3 2382 aa9.3□□□□□ -0.92
LRRTM1-205ENST00000417012 SLURP1P55000 103 aa9.29□□□□□ -0.92
LRRTM1-205ENST00000417012 SETD2Q9BYW2 2564 aaPredicted RBP9.29□□□□□ -0.92
LRRTM1-205ENST00000417012 IGHV3-38A0A0C4DH36 116 aa9.29□□□□□ -0.92
LRRTM1-205ENST00000417012 PRM2P04554 102 aa9.29□□□□□ -0.92
LRRTM1-205ENST00000417012 CIRBPQ14011 172 aaKnown RBP9.29□□□□□ -0.92
LRRTM1-205ENST00000417012 CDKN2A-AS1Q9UH64 79 aa9.29□□□□□ -0.92
LRRTM1-205ENST00000417012 NDUFA1O15239 70 aa9.29□□□□□ -0.92
LRRTM1-205ENST00000417012 DAND5Q8N907 189 aa9.29□□□□□ -0.92
LRRTM1-205ENST00000417012 DNAJC30Q96LL9 226 aa9.29□□□□□ -0.92
LRRTM1-205ENST00000417012 UBE2E2Q96LR5 201 aa9.29□□□□□ -0.92
LRRTM1-205ENST00000417012 MRPL23Q16540 153 aaKnown RBP9.28□□□□□ -0.92
LRRTM1-205ENST00000417012 DGAT2L7PQ6IED9 249 aa9.28□□□□□ -0.92
LRRTM1-205ENST00000417012 NACAE9PAV3 2078 aa9.28□□□□□ -0.92
LRRTM1-205ENST00000417012 FAM240AA0A1B0GVK7 77 aa9.27□□□□□ -0.93
LRRTM1-205ENST00000417012 RBMY1BA6NDE4 496 aaKnown RBP9.27□□□□□ -0.93
LRRTM1-205ENST00000417012 RBMY1EA6NEQ0 496 aaKnown RBP9.27□□□□□ -0.93
LRRTM1-205ENST00000417012 IGHV3-53P01767 116 aa9.27□□□□□ -0.93
LRRTM1-205ENST00000417012 RBMY1DP0C7P1 496 aaKnown RBP9.27□□□□□ -0.93
LRRTM1-205ENST00000417012 ACANP16112 2415 aa9.27□□□□□ -0.93
LRRTM1-205ENST00000417012 A8MTW9 85 aa9.27□□□□□ -0.93
LRRTM1-205ENST00000417012 TIRAPP58753 221 aa9.27□□□□□ -0.93
LRRTM1-205ENST00000417012 C5orf47Q569G3 176 aa9.27□□□□□ -0.93
LRRTM1-205ENST00000417012 KHDC1LQ5JSQ8 128 aa9.27□□□□□ -0.93
LRRTM1-205ENST00000417012 KRTAP1-3Q8IUG1 177 aa9.26□□□□□ -0.93
LRRTM1-205ENST00000417012 TMEM101Q96IK0 257 aa9.26□□□□□ -0.93
LRRTM1-205ENST00000417012 LINC01587Q99440 93 aa9.26□□□□□ -0.93
LRRTM1-205ENST00000417012 IGLV5-45A0A087WSX0 123 aa9.26□□□□□ -0.93
LRRTM1-205ENST00000417012 WFDC11Q8NEX6 87 aa9.25□□□□□ -0.93
LRRTM1-205ENST00000417012 NIPBLQ6KC79 2804 aaeCLIP9.25□□□□□ -0.93
LRRTM1-205ENST00000417012 DEFB121Q5J5C9 76 aa9.25□□□□□ -0.93
LRRTM1-205ENST00000417012 Q9H8V8 135 aa9.25□□□□□ -0.93
LRRTM1-205ENST00000417012 CSDC2Q9Y534 153 aaKnown RBP9.25□□□□□ -0.93
LRRTM1-205ENST00000417012 HERVK_113P63121 156 aa9.24□□□□□ -0.93
LRRTM1-205ENST00000417012 C11orf72Q8NBR9 251 aa9.24□□□□□ -0.93
LRRTM1-205ENST00000417012 LINC00308Q8TCZ7 52 aa9.24□□□□□ -0.93
LRRTM1-205ENST00000417012 COPS9Q8WXC6 57 aa9.24□□□□□ -0.93
LRRTM1-205ENST00000417012 CITED2Q99967 270 aaPredicted RBP9.23□□□□□ -0.93
LRRTM1-205ENST00000417012 ITPR2Q14571 2701 aa9.23□□□□□ -0.93
LRRTM1-205ENST00000417012 INSP01308 110 aa9.23□□□□□ -0.93
LRRTM1-205ENST00000417012 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.23□□□□□ -0.93
LRRTM1-205ENST00000417012 C11orf44Q8N8P7 122 aa9.23□□□□□ -0.93
LRRTM1-205ENST00000417012 RS1O15537 224 aa9.23□□□□□ -0.93
LRRTM1-205ENST00000417012 BEAN1Q3B7T3 259 aa9.23□□□□□ -0.93
LRRTM1-205ENST00000417012 ZNF625Q96I27 306 aaPredicted RBP9.23□□□□□ -0.93
LRRTM1-205ENST00000417012 IGHV3OR16-12A0A075B7B8 117 aa9.22□□□□□ -0.93
LRRTM1-205ENST00000417012 A0A0U1RRA0 63 aa9.22□□□□□ -0.93
LRRTM1-205ENST00000417012 COX6A2Q02221 97 aa9.22□□□□□ -0.93
LRRTM1-205ENST00000417012 MAP6D1Q9H9H5 199 aa9.22□□□□□ -0.93
LRRTM1-205ENST00000417012 PEMTQ9UBM1 199 aa9.22□□□□□ -0.93
LRRTM1-205ENST00000417012 IGLV5-39A0A0G2JS06 123 aa9.22□□□□□ -0.93
LRRTM1-205ENST00000417012 LOC107984640A0A0U1RRK4 108 aa9.22□□□□□ -0.93
LRRTM1-205ENST00000417012 LRRC75A-AS1Q8N1F1 130 aa9.22□□□□□ -0.93
LRRTM1-205ENST00000417012 MTORP42345 2549 aa9.22□□□□□ -0.93
LRRTM1-205ENST00000417012 COX7A2LO14548 114 aa9.21□□□□□ -0.93
LRRTM1-205ENST00000417012 DYNLRB2Q8TF09 96 aa9.21□□□□□ -0.93
LRRTM1-205ENST00000417012 LINC00242Q5T6M2 205 aa9.21□□□□□ -0.94
LRRTM1-205ENST00000417012 PDZD2O15018 2839 aa9.2□□□□□ -0.94
LRRTM1-205ENST00000417012 PRIMA1Q86XR5 153 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms