RNA–Protein interactions for RNA: ENST00000416774.1

LINC01342-201, Transcript of long intergenic non-protein coding RNA 1342, humanhuman

TSL 1 (best) BASIC

Gene LINC01342, Length 1,620 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01342-201ENST00000416774 DEFB130BP0DP73 79 aa16.66■□□□□ 0.26
LINC01342-201ENST00000416774 DEFB130AP0DP74 79 aa16.66■□□□□ 0.26
LINC01342-201ENST00000416774 MAPKAPK5-AS1Q8N8E1 139 aa16.66■□□□□ 0.26
LINC01342-201ENST00000416774 MYMXA0A1B0GTQ4 84 aa16.65■□□□□ 0.26
LINC01342-201ENST00000416774 TMEM170BQ5T4T1 132 aa16.65■□□□□ 0.26
LINC01342-201ENST00000416774 NTM-AS1Q6ZSK4 140 aa16.65■□□□□ 0.26
LINC01342-201ENST00000416774 TTTY13Q9BZ97 58 aa16.65■□□□□ 0.26
LINC01342-201ENST00000416774 TAL2Q16559 108 aa16.63■□□□□ 0.25
LINC01342-201ENST00000416774 FAM222AQ5U5X8 452 aa16.63■□□□□ 0.25
LINC01342-201ENST00000416774 DGAT2L7PQ6IED9 249 aa16.63■□□□□ 0.25
LINC01342-201ENST00000416774 CEMP1Q6PRD7 247 aaPredicted RBP16.63■□□□□ 0.25
LINC01342-201ENST00000416774 A0A0J9YXV3 536 aa16.63■□□□□ 0.25
LINC01342-201ENST00000416774 TMEM223A0PJW6 202 aa16.63■□□□□ 0.25
LINC01342-201ENST00000416774 ZNF22P17026 224 aaPredicted RBP16.63■□□□□ 0.25
LINC01342-201ENST00000416774 KPRPQ5T749 579 aaPredicted RBP16.63■□□□□ 0.25
LINC01342-201ENST00000416774 ORAOV1Q8WV07 137 aa16.63■□□□□ 0.25
LINC01342-201ENST00000416774 IGHV4-28A0A0C4DH34 117 aa16.62■□□□□ 0.25
LINC01342-201ENST00000416774 TINCRA0A1B0GVN0 87 aa16.62■□□□□ 0.25
LINC01342-201ENST00000416774 TMEM243Q9BU79 118 aa16.62■□□□□ 0.25
LINC01342-201ENST00000416774 Q6ZUT4 128 aa16.61■□□□□ 0.25
LINC01342-201ENST00000416774 Q8NAQ8 132 aa16.61■□□□□ 0.25
LINC01342-201ENST00000416774 LOC100131303A0A0U1RQF7 123 aa16.6■□□□□ 0.25
LINC01342-201ENST00000416774 PRO0255Q9UI72 69 aa16.6■□□□□ 0.25
LINC01342-201ENST00000416774 LEPROTO15243 131 aa16.59■□□□□ 0.25
LINC01342-201ENST00000416774 KRTAP10-11P60412 298 aa16.59■□□□□ 0.25
LINC01342-201ENST00000416774 A6NDN8 102 aa16.58■□□□□ 0.24
LINC01342-201ENST00000416774 PRB2P02812 416 aaPredicted RBP16.58■□□□□ 0.24
LINC01342-201ENST00000416774 TIRAPP58753 221 aa16.58■□□□□ 0.24
LINC01342-201ENST00000416774 FAM19A3Q7Z5A8 133 aa16.58■□□□□ 0.24
LINC01342-201ENST00000416774 ZNF815PA8K554 130 aa16.57■□□□□ 0.24
LINC01342-201ENST00000416774 UBE2L6O14933 153 aa16.57■□□□□ 0.24
LINC01342-201ENST00000416774 UBE2D1P51668 147 aa16.57■□□□□ 0.24
LINC01342-201ENST00000416774 PLEKHB2Q96CS7 222 aa16.57■□□□□ 0.24
LINC01342-201ENST00000416774 ZNF25P17030 456 aaPredicted RBP16.56■□□□□ 0.24
LINC01342-201ENST00000416774 TEX48A0A1B0GUV7 120 aa16.56■□□□□ 0.24
LINC01342-201ENST00000416774 TM2D2Q9BX73 214 aa16.56■□□□□ 0.24
LINC01342-201ENST00000416774 TRBV6-8A0A0A6YYG3 113 aa16.55■□□□□ 0.24
LINC01342-201ENST00000416774 J3QQQ9 107 aa16.55■□□□□ 0.24
LINC01342-201ENST00000416774 SPART-AS1P0CW21 52 aa16.55■□□□□ 0.24
LINC01342-201ENST00000416774 DAD1P61803 113 aa16.55■□□□□ 0.24
LINC01342-201ENST00000416774 OR5A1Q8NGJ0 315 aa16.55■□□□□ 0.24
LINC01342-201ENST00000416774 TMEM101Q96IK0 257 aa16.55■□□□□ 0.24
LINC01342-201ENST00000416774 RNASE13Q5GAN3 156 aaKnown RBP16.54■□□□□ 0.24
LINC01342-201ENST00000416774 AMMECR1LQ6DCA0 310 aa16.54■□□□□ 0.24
LINC01342-201ENST00000416774 CDC42SE2Q9NRR3 84 aa16.54■□□□□ 0.24
LINC01342-201ENST00000416774 COX11Q9Y6N1 276 aa16.54■□□□□ 0.24
LINC01342-201ENST00000416774 IGLV5-45A0A087WSX0 123 aa16.53■□□□□ 0.24
LINC01342-201ENST00000416774 GYPEP15421 78 aa16.53■□□□□ 0.24
LINC01342-201ENST00000416774 LGALS3P17931 250 aaKnown RBP16.53■□□□□ 0.24
LINC01342-201ENST00000416774 CEND1Q8N111 149 aa16.53■□□□□ 0.24
LINC01342-201ENST00000416774 ATP6V0E2Q8NHE4 81 aa16.53■□□□□ 0.24
LINC01342-201ENST00000416774 TAX1BP3O14907 124 aa16.52■□□□□ 0.24
LINC01342-201ENST00000416774 GEMIN7Q9H840 131 aaKnown RBP16.52■□□□□ 0.24
LINC01342-201ENST00000416774 ATP5G1P05496 136 aa16.52■□□□□ 0.23
LINC01342-201ENST00000416774 MEGF8Q7Z7M0 2845 aa16.52■□□□□ 0.23
LINC01342-201ENST00000416774 HERVK_113P63121 156 aa16.51■□□□□ 0.23
LINC01342-201ENST00000416774 NOTCH1P46531 2555 aa16.5■□□□□ 0.23
LINC01342-201ENST00000416774 PAX4O43316 350 aa16.5■□□□□ 0.23
LINC01342-201ENST00000416774 TSPEAR-AS2P59090 65 aa16.5■□□□□ 0.23
LINC01342-201ENST00000416774 SCGB1D4Q6XE38 83 aa16.5■□□□□ 0.23
LINC01342-201ENST00000416774 IGHV1-58A0A0C4DH39 117 aa16.49■□□□□ 0.23
LINC01342-201ENST00000416774 H3BRM9 83 aa16.49■□□□□ 0.23
LINC01342-201ENST00000416774 DEFB4AO15263 64 aa16.49■□□□□ 0.23
LINC01342-201ENST00000416774 GCSHP23434 173 aa16.49■□□□□ 0.23
LINC01342-201ENST00000416774 HIST1H4GQ99525 98 aa16.49■□□□□ 0.23
LINC01342-201ENST00000416774 LINC00469Q8N7U9 141 aa16.48■□□□□ 0.23
LINC01342-201ENST00000416774 SPANXB1Q9NS25 103 aaPredicted RBP16.47■□□□□ 0.23
LINC01342-201ENST00000416774 CELA1Q9UNI1 258 aa16.47■□□□□ 0.23
LINC01342-201ENST00000416774 A0A0J9YY99 117 aa16.46■□□□□ 0.23
LINC01342-201ENST00000416774 IGHV3-30-3P0DP02 117 aa16.46■□□□□ 0.23
LINC01342-201ENST00000416774 LINC00242Q5T6M2 205 aa16.46■□□□□ 0.23
LINC01342-201ENST00000416774 TRAV26-1A0A087WT03 109 aa16.45■□□□□ 0.22
LINC01342-201ENST00000416774 FXYD2P54710 66 aa16.45■□□□□ 0.22
LINC01342-201ENST00000416774 VSIG2Q96IQ7 327 aa16.45■□□□□ 0.22
LINC01342-201ENST00000416774 PTTG1IPP53801 180 aa16.45■□□□□ 0.22
LINC01342-201ENST00000416774 CHCHD5Q9BSY4 110 aa16.45■□□□□ 0.22
LINC01342-201ENST00000416774 K7EIL1 84 aa16.44■□□□□ 0.22
LINC01342-201ENST00000416774 SMIM13P0DJ93 91 aa16.44■□□□□ 0.22
LINC01342-201ENST00000416774 GAGE6Q13070 117 aa16.44■□□□□ 0.22
LINC01342-201ENST00000416774 SH2D6Q7Z4S9 175 aa16.43■□□□□ 0.22
LINC01342-201ENST00000416774 MRAPQ8TCY5 172 aa16.43■□□□□ 0.22
LINC01342-201ENST00000416774 CDKN2A-AS1Q9UH64 79 aa16.43■□□□□ 0.22
LINC01342-201ENST00000416774 DNAH3Q8TD57 4116 aa16.43■□□□□ 0.22
LINC01342-201ENST00000416774 A0A1B0GUV1 79 aa16.41■□□□□ 0.22
LINC01342-201ENST00000416774 SRSF9Q13242 221 aaKnown RBP eCLIP16.41■□□□□ 0.22
LINC01342-201ENST00000416774 Q6ZVH6 145 aa16.41■□□□□ 0.22
LINC01342-201ENST00000416774 C11orf68Q9H3H3 251 aaKnown RBP16.41■□□□□ 0.22
LINC01342-201ENST00000416774 IGHV3-64A0A075B6Q5 118 aa16.4■□□□□ 0.22
LINC01342-201ENST00000416774 TRAV13-1A0A0B4J241 112 aa16.4■□□□□ 0.22
LINC01342-201ENST00000416774 C9orf118A6NHY6 69 aa16.4■□□□□ 0.22
LINC01342-201ENST00000416774 COX6A2Q02221 97 aa16.4■□□□□ 0.22
LINC01342-201ENST00000416774 DEFB121Q5J5C9 76 aa16.4■□□□□ 0.22
LINC01342-201ENST00000416774 TRAV8-3A0A0A6YYJ7 113 aa16.39■□□□□ 0.21
LINC01342-201ENST00000416774 F5H768 121 aa16.39■□□□□ 0.21
LINC01342-201ENST00000416774 SPINK8P0C7L1 97 aa16.39■□□□□ 0.21
LINC01342-201ENST00000416774 MRPL23Q16540 153 aaKnown RBP16.39■□□□□ 0.21
LINC01342-201ENST00000416774 IGLV5-39A0A0G2JS06 123 aa16.38■□□□□ 0.21
LINC01342-201ENST00000416774 TMEM238LA0A1B0GVL6 79 aa16.38■□□□□ 0.21
LINC01342-201ENST00000416774 A6NJY4 79 aa16.38■□□□□ 0.21
LINC01342-201ENST00000416774 ZFAND6Q6FIF0 208 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms