RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 TRAV8-6A0A0B4J262 113 aa13.9□□□□□ -0.18
PTPRU-203ENST00000415600 TRBV27A0A0K0K1C4 114 aa13.9□□□□□ -0.18
PTPRU-203ENST00000415600 KRTAP10-2P60368 255 aa13.9□□□□□ -0.18
PTPRU-203ENST00000415600 WFDC10BQ8IUB3 73 aa13.9□□□□□ -0.18
PTPRU-203ENST00000415600 PRO1933Q9H354 126 aa13.9□□□□□ -0.18
PTPRU-203ENST00000415600 PCLOQ9Y6V0 5065 aa13.89□□□□□ -0.19
PTPRU-203ENST00000415600 TRBV6-4A0A1B0GX49 114 aa13.89□□□□□ -0.19
PTPRU-203ENST00000415600 IGHV3-73A0A0B4J1V6 119 aa13.88□□□□□ -0.19
PTPRU-203ENST00000415600 ATP5LO75964 103 aa13.88□□□□□ -0.19
PTPRU-203ENST00000415600 KIR2DL4Q99706 377 aa13.88□□□□□ -0.19
PTPRU-203ENST00000415600 PAM16Q9Y3D7 125 aa13.88□□□□□ -0.19
PTPRU-203ENST00000415600 RYR1P21817 5038 aa13.87□□□□□ -0.19
PTPRU-203ENST00000415600 IGHV3-38A0A0C4DH36 116 aa13.87□□□□□ -0.19
PTPRU-203ENST00000415600 H0Y8G0 127 aa13.87□□□□□ -0.19
PTPRU-203ENST00000415600 ATOH7Q8N100 152 aa13.87□□□□□ -0.19
PTPRU-203ENST00000415600 SLC25A29Q8N8R3 303 aa13.87□□□□□ -0.19
PTPRU-203ENST00000415600 TOMM6Q96B49 74 aa13.87□□□□□ -0.19
PTPRU-203ENST00000415600 LRP1BQ9NZR2 4599 aa13.87□□□□□ -0.19
PTPRU-203ENST00000415600 G0S2P27469 103 aa13.86□□□□□ -0.19
PTPRU-203ENST00000415600 LOC100131303A0A0U1RQF7 123 aa13.85□□□□□ -0.19
PTPRU-203ENST00000415600 LINC01549A6NIU2 74 aa13.85□□□□□ -0.19
PTPRU-203ENST00000415600 Q6ZSN1 163 aa13.85□□□□□ -0.19
PTPRU-203ENST00000415600 Q8N1X5 172 aa13.85□□□□□ -0.19
PTPRU-203ENST00000415600 PSCAO43653 123 aa13.84□□□□□ -0.19
PTPRU-203ENST00000415600 SPATA45Q537H7 98 aa13.84□□□□□ -0.19
PTPRU-203ENST00000415600 DNAJC30Q96LL9 226 aa13.84□□□□□ -0.19
PTPRU-203ENST00000415600 A0A087WTM6 91 aa13.83□□□□□ -0.19
PTPRU-203ENST00000415600 I3L3M4 83 aa13.83□□□□□ -0.19
PTPRU-203ENST00000415600 LINC01556Q5JQF7 62 aa13.83□□□□□ -0.19
PTPRU-203ENST00000415600 C2orf66Q6UXQ4 117 aa13.83□□□□□ -0.19
PTPRU-203ENST00000415600 TNFRSF18Q9Y5U5 241 aa13.83□□□□□ -0.19
PTPRU-203ENST00000415600 HSPG2P98160 4391 aa13.83□□□□□ -0.2
PTPRU-203ENST00000415600 LINC00587B1AMM8 73 aa13.82□□□□□ -0.2
PTPRU-203ENST00000415600 DDTP30046 118 aa13.82□□□□□ -0.2
PTPRU-203ENST00000415600 LELP1Q5T871 98 aa13.82□□□□□ -0.2
PTPRU-203ENST00000415600 NEXN-AS1Q8NBZ9 246 aa13.82□□□□□ -0.2
PTPRU-203ENST00000415600 ATP6V0E2Q8NHE4 81 aa13.82□□□□□ -0.2
PTPRU-203ENST00000415600 GTSF1LQ9H1H1 148 aa13.82□□□□□ -0.2
PTPRU-203ENST00000415600 CYSLTR1Q9Y271 337 aa13.82□□□□□ -0.2
PTPRU-203ENST00000415600 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.81□□□□□ -0.2
PTPRU-203ENST00000415600 SCGB3A1Q96QR1 104 aa13.81□□□□□ -0.2
PTPRU-203ENST00000415600 TSHBP01222 138 aa13.8□□□□□ -0.2
PTPRU-203ENST00000415600 PRSS1P07477 247 aa13.8□□□□□ -0.2
PTPRU-203ENST00000415600 MAJINQ3KP22 176 aa13.8□□□□□ -0.2
PTPRU-203ENST00000415600 PMCHL2Q9BQD1 86 aa13.8□□□□□ -0.2
PTPRU-203ENST00000415600 ERASQ7Z444 233 aa13.79□□□□□ -0.2
PTPRU-203ENST00000415600 KRTAP4-5Q9BYR2 181 aa13.79□□□□□ -0.2
PTPRU-203ENST00000415600 DNAH5Q8TE73 4624 aa13.79□□□□□ -0.2
PTPRU-203ENST00000415600 ODF1Q14990 250 aa13.79□□□□□ -0.2
PTPRU-203ENST00000415600 TRBV10-1A0A0K0K1A3 114 aa13.78□□□□□ -0.2
PTPRU-203ENST00000415600 IBA57-AS1B1ANH7 110 aa13.78□□□□□ -0.2
PTPRU-203ENST00000415600 Q6ZN92 141 aa13.78□□□□□ -0.2
PTPRU-203ENST00000415600 TRAV12-1A0A0B4J245 112 aa13.77□□□□□ -0.21
PTPRU-203ENST00000415600 hDV102S1A0JD36 115 aa13.77□□□□□ -0.21
PTPRU-203ENST00000415600 HSBP1L1C9JCN9 74 aa13.77□□□□□ -0.21
PTPRU-203ENST00000415600 Q9UF83 564 aa13.77□□□□□ -0.21
PTPRU-203ENST00000415600 DEFB104AQ8WTQ1 72 aa13.76□□□□□ -0.21
PTPRU-203ENST00000415600 MIEN1Q9BRT3 115 aa13.76□□□□□ -0.21
PTPRU-203ENST00000415600 TM2D2Q9BX73 214 aa13.76□□□□□ -0.21
PTPRU-203ENST00000415600 A0A087WX48 190 aa13.75□□□□□ -0.21
PTPRU-203ENST00000415600 IGLC3P0DOY3 106 aa13.75□□□□□ -0.21
PTPRU-203ENST00000415600 NTN5Q8WTR8 489 aaPredicted RBP13.75□□□□□ -0.21
PTPRU-203ENST00000415600 TIMM17AQ99595 171 aa13.75□□□□□ -0.21
PTPRU-203ENST00000415600 IGIPA6NJ69 53 aa13.75□□□□□ -0.21
PTPRU-203ENST00000415600 RPL39P62891 51 aaKnown RBP13.75□□□□□ -0.21
PTPRU-203ENST00000415600 C20orf203Q8NBC4 194 aa13.75□□□□□ -0.21
PTPRU-203ENST00000415600 TMEM141Q96I45 108 aa13.75□□□□□ -0.21
PTPRU-203ENST00000415600 Q9HAA7 133 aa13.75□□□□□ -0.21
PTPRU-203ENST00000415600 IGHV3-30P01768 117 aa13.74□□□□□ -0.21
PTPRU-203ENST00000415600 IGHV3-33P01772 117 aa13.74□□□□□ -0.21
PTPRU-203ENST00000415600 IGHV3-30-3P0DP02 117 aa13.74□□□□□ -0.21
PTPRU-203ENST00000415600 IGHV3-30-5P0DP03 117 aa13.74□□□□□ -0.21
PTPRU-203ENST00000415600 GCSHP23434 173 aa13.74□□□□□ -0.21
PTPRU-203ENST00000415600 BAALCQ8WXS3 180 aa13.74□□□□□ -0.21
PTPRU-203ENST00000415600 GAGE12JA6NER3 117 aa13.73□□□□□ -0.21
PTPRU-203ENST00000415600 EPM2AB3EWF7 344 aa13.73□□□□□ -0.21
PTPRU-203ENST00000415600 RPL36AP83881 106 aaKnown RBP13.73□□□□□ -0.21
PTPRU-203ENST00000415600 GAGE1Q13065 139 aa13.73□□□□□ -0.21
PTPRU-203ENST00000415600 GAGE4Q13068 117 aa13.73□□□□□ -0.21
PTPRU-203ENST00000415600 GAGE5Q13069 117 aa13.73□□□□□ -0.21
PTPRU-203ENST00000415600 GAGE13Q4V321 117 aa13.73□□□□□ -0.21
PTPRU-203ENST00000415600 RPL36ALQ969Q0 106 aaKnown RBP13.73□□□□□ -0.21
PTPRU-203ENST00000415600 UQCR10Q9UDW1 63 aa13.73□□□□□ -0.21
PTPRU-203ENST00000415600 TRBV7-3A0A075B6L6 115 aa13.72□□□□□ -0.21
PTPRU-203ENST00000415600 TRAV8-3A0A0A6YYJ7 113 aa13.72□□□□□ -0.21
PTPRU-203ENST00000415600 IGLV5-52A0A0A0MRZ9 124 aa13.71□□□□□ -0.21
PTPRU-203ENST00000415600 DPM2O94777 84 aa13.71□□□□□ -0.21
PTPRU-203ENST00000415600 IGKCP01834 107 aa13.71□□□□□ -0.21
PTPRU-203ENST00000415600 ABCA13Q86UQ4 5058 aa13.71□□□□□ -0.22
PTPRU-203ENST00000415600 APOBP04114 4563 aaKnown RBP13.71□□□□□ -0.22
PTPRU-203ENST00000415600 F8VRH5 84 aa13.71□□□□□ -0.22
PTPRU-203ENST00000415600 FUSP35637 526 aaKnown RBP eCLIP13.71□□□□□ -0.22
PTPRU-203ENST00000415600 MRPL35Q9NZE8 188 aaKnown RBP13.71□□□□□ -0.22
PTPRU-203ENST00000415600 COTL1Q14019 142 aa13.7□□□□□ -0.22
PTPRU-203ENST00000415600 LINC00694P0DN24 101 aa13.69□□□□□ -0.22
PTPRU-203ENST00000415600 UBE2D3P61077 147 aa13.69□□□□□ -0.22
PTPRU-203ENST00000415600 UBE2D2P62837 147 aa13.69□□□□□ -0.22
PTPRU-203ENST00000415600 C14orf144Q96I85 54 aa13.69□□□□□ -0.22
PTPRU-203ENST00000415600 CHCHD7Q9BUK0 85 aa13.69□□□□□ -0.22
PTPRU-203ENST00000415600 CHTOPQ9Y3Y2 248 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms