RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TMEM241Q24JQ0 296 aa3.26□□□□□ -1.89
VPS41-205ENST00000414632 Q6ZRN7 208 aaPredicted RBP3.26□□□□□ -1.89
VPS41-205ENST00000414632 SPATA12Q7Z6I5 190 aa3.26□□□□□ -1.89
VPS41-205ENST00000414632 RPL39LQ96EH5 51 aaKnown RBP3.26□□□□□ -1.89
VPS41-205ENST00000414632 DPH3P1Q9H4G8 78 aa3.26□□□□□ -1.89
VPS41-205ENST00000414632 NAT8Q9UHE5 227 aa3.26□□□□□ -1.89
VPS41-205ENST00000414632 V9GYV3 84 aa3.26□□□□□ -1.89
VPS41-205ENST00000414632 KIAA1109Q2LD37 5005 aa3.26□□□□□ -1.89
VPS41-205ENST00000414632 UBR4Q5T4S7 5183 aa3.26□□□□□ -1.89
VPS41-205ENST00000414632 HIGD1CA8MV81 97 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 A8MWL6 223 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 TMEM262E9PQX1 116 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 SMKR1H3BMG3 65 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 GAS8-AS1O95177 125 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 CFC1BP0CG36 223 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 CFC1P0CG37 223 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 LINC01556Q5JQF7 62 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 RASL11AQ6T310 242 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 CLPSL2Q6UWE3 100 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 NTM-AS1Q6ZSK4 140 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 C15orf54Q8N8G6 183 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 GATD1Q8NB37 220 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 NUP35Q8NFH5 326 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 TSKUQ8WUA8 353 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 CHCHD5Q9BSY4 110 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 OSTCQ9NRP0 149 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 KLK12Q9UKR0 248 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 DNAH8Q96JB1 4490 aa3.25□□□□□ -1.89
VPS41-205ENST00000414632 HSPG2P98160 4391 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 IGLV7-46A0A075B6I9 117 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 A0A087WWC5 75 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 A0A087WX48 190 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 TRBV6-8A0A0A6YYG3 113 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 A0A1B0GUT8 65 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 C16orf90A8MZG2 172 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 IBA57-AS1B1ANH7 110 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 H7C1H1 209 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 LECT2O14960 151 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 PSCAO43653 123 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 NCR2O95944 276 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 S100A12P80511 92 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 MPV17L2Q567V2 206 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 CLLU1Q5K131 121 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 LINC00242Q5T6M2 205 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 SMIM15Q7Z3B0 74 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 NIT1Q86X76 327 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 C10orf126Q8N4M7 172 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 Q8N976 141 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 UBE2WQ96B02 151 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 BORCS7Q96B45 105 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 CNFNQ9BYD5 112 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 NIT2Q9NQR4 276 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 URGCP-MRPS24S4R325 110 aa3.24□□□□□ -1.89
VPS41-205ENST00000414632 IGLV4-3A0A075B6K6 122 aa3.23□□□□□ -1.89
VPS41-205ENST00000414632 IGKV2D-24A0A075B6R9 120 aa3.23□□□□□ -1.89
VPS41-205ENST00000414632 A0A087WTM6 91 aa3.23□□□□□ -1.89
VPS41-205ENST00000414632 LINC00862A6NCI5 91 aa3.23□□□□□ -1.89
VPS41-205ENST00000414632 RPS10P46783 165 aaKnown RBP3.23□□□□□ -1.89
VPS41-205ENST00000414632 WFDC2Q14508 124 aa3.23□□□□□ -1.89
VPS41-205ENST00000414632 MRPL54Q6P161 138 aaKnown RBP3.23□□□□□ -1.89
VPS41-205ENST00000414632 KCNIP4Q6PIL6 250 aa3.23□□□□□ -1.89
VPS41-205ENST00000414632 AMN1Q8IY45 258 aa3.23□□□□□ -1.89
VPS41-205ENST00000414632 RNF185Q96GF1 192 aa3.23□□□□□ -1.89
VPS41-205ENST00000414632 GFRA4Q9GZZ7 299 aa3.23□□□□□ -1.89
VPS41-205ENST00000414632 SMDT1Q9H4I9 107 aa3.23□□□□□ -1.89
VPS41-205ENST00000414632 NAT8BQ9UHF3 227 aa3.23□□□□□ -1.89
VPS41-205ENST00000414632 IGLV10-54A0A075B6I4 117 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 TRBV25-1A0A075B6N4 114 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.22□□□□□ -1.89
VPS41-205ENST00000414632 IGHV1-24A0A0C4DH33 117 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 SMIM27A0A1W2PRY6 76 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 IGKV2-29A2NJV5 120 aaPredicted RBP3.22□□□□□ -1.89
VPS41-205ENST00000414632 SDHAF1A6NFY7 115 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 RPL37AP8A6NKH3 93 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 KRTAP29-1A8MX34 341 aaPredicted RBP3.22□□□□□ -1.89
VPS41-205ENST00000414632 H0Y8G0 127 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 CRPP02741 224 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 ANGP03950 147 aaKnown RBP3.22□□□□□ -1.89
VPS41-205ENST00000414632 ADCYAP1P18509 176 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 RAB4AP20338 218 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 RBX1P62877 108 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 COMMD7Q86VX2 200 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 Q8NBF4 154 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 BAALCQ8WXS3 180 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 C12orf57Q99622 126 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 OCR1Q9BZK8 76 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 TMEM191AQ9H0A3 160 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 TMEM242Q9NWH2 141 aa3.22□□□□□ -1.89
VPS41-205ENST00000414632 IGLV4-60A0A075B6I1 120 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.21□□□□□ -1.9
VPS41-205ENST00000414632 TRAV8-3A0A0A6YYJ7 113 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 IGKV3OR2-268A0A0C4DH90 116 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 LRCOL1A6NCL2 159 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 FAM231BA6NCW3 169 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 F8W036 122 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 K7EP13 123 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 UBE2L6O14933 153 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 HLA-DQA1P01909 254 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 APCSP02743 223 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 PMCHP20382 165 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms