RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 GYPEP15421 78 aa11.64□□□□□ -0.55
SCAMP4-204ENST00000414057 SMAGPQ0VAQ4 97 aa11.64□□□□□ -0.55
SCAMP4-204ENST00000414057 C12orf57Q99622 126 aa11.64□□□□□ -0.55
SCAMP4-204ENST00000414057 SH2D6Q7Z4S9 175 aa11.63□□□□□ -0.55
SCAMP4-204ENST00000414057 UPK3BQ9BT76 320 aa11.63□□□□□ -0.55
SCAMP4-204ENST00000414057 IGHV3-38A0A0C4DH36 116 aa11.63□□□□□ -0.55
SCAMP4-204ENST00000414057 LOC100131303A0A0U1RQF7 123 aa11.63□□□□□ -0.55
SCAMP4-204ENST00000414057 Q6ZN92 141 aa11.63□□□□□ -0.55
SCAMP4-204ENST00000414057 CHCHD7Q9BUK0 85 aa11.63□□□□□ -0.55
SCAMP4-204ENST00000414057 PYGO1Q9Y3Y4 419 aa11.63□□□□□ -0.55
SCAMP4-204ENST00000414057 IGIPA6NJ69 53 aa11.62□□□□□ -0.55
SCAMP4-204ENST00000414057 LINC01545Q5VT33 79 aa11.62□□□□□ -0.55
SCAMP4-204ENST00000414057 VSIG2Q96IQ7 327 aa11.62□□□□□ -0.55
SCAMP4-204ENST00000414057 MRPS16Q9Y3D3 137 aaKnown RBP11.62□□□□□ -0.55
SCAMP4-204ENST00000414057 PKHD1P08F94 4074 aa11.62□□□□□ -0.55
SCAMP4-204ENST00000414057 H7C423 109 aa11.61□□□□□ -0.55
SCAMP4-204ENST00000414057 PRSS1P07477 247 aa11.61□□□□□ -0.55
SCAMP4-204ENST00000414057 RPL39P62891 51 aaKnown RBP11.61□□□□□ -0.55
SCAMP4-204ENST00000414057 ESRGQ1W209 222 aa11.61□□□□□ -0.55
SCAMP4-204ENST00000414057 PAPPA-AS1Q5QFB9 102 aa11.61□□□□□ -0.55
SCAMP4-204ENST00000414057 Q8N976 141 aa11.61□□□□□ -0.55
SCAMP4-204ENST00000414057 ATP6V0E2Q8NHE4 81 aa11.61□□□□□ -0.55
SCAMP4-204ENST00000414057 SPANXA1Q9NS26 97 aa11.61□□□□□ -0.55
SCAMP4-204ENST00000414057 TRBV25-1A0A075B6N4 114 aa11.6□□□□□ -0.55
SCAMP4-204ENST00000414057 TRAV12-1A0A0B4J245 112 aa11.6□□□□□ -0.55
SCAMP4-204ENST00000414057 S100A12P80511 92 aa11.6□□□□□ -0.55
SCAMP4-204ENST00000414057 MRPL23Q16540 153 aaKnown RBP11.6□□□□□ -0.55
SCAMP4-204ENST00000414057 TIMM21Q9BVV7 248 aa11.6□□□□□ -0.55
SCAMP4-204ENST00000414057 TNP2Q05952 138 aa11.59□□□□□ -0.55
SCAMP4-204ENST00000414057 TEX43Q6ZNM6 134 aa11.59□□□□□ -0.55
SCAMP4-204ENST00000414057 DEFB104AQ8WTQ1 72 aa11.59□□□□□ -0.55
SCAMP4-204ENST00000414057 ICOSQ9Y6W8 199 aa11.59□□□□□ -0.55
SCAMP4-204ENST00000414057 PKD1P98161 4303 aa11.59□□□□□ -0.55
SCAMP4-204ENST00000414057 A0A096LPF7 62 aa11.58□□□□□ -0.56
SCAMP4-204ENST00000414057 H0Y8G0 127 aa11.58□□□□□ -0.56
SCAMP4-204ENST00000414057 NTM-AS1Q6ZSK4 140 aa11.58□□□□□ -0.56
SCAMP4-204ENST00000414057 TMEM243Q9BU79 118 aa11.58□□□□□ -0.56
SCAMP4-204ENST00000414057 KIAA1109Q2LD37 5005 aa11.58□□□□□ -0.56
SCAMP4-204ENST00000414057 DYNC1H1Q14204 4646 aaKnown RBP11.58□□□□□ -0.56
SCAMP4-204ENST00000414057 DNAH11Q96DT5 4516 aa11.58□□□□□ -0.56
SCAMP4-204ENST00000414057 TRBV6-8A0A0A6YYG3 113 aa11.57□□□□□ -0.56
SCAMP4-204ENST00000414057 BAALCQ8WXS3 180 aa11.57□□□□□ -0.56
SCAMP4-204ENST00000414057 A0A087WX48 190 aa11.57□□□□□ -0.56
SCAMP4-204ENST00000414057 MRPL52Q86TS9 123 aaKnown RBP11.57□□□□□ -0.56
SCAMP4-204ENST00000414057 UBE2D4Q9Y2X8 147 aa11.57□□□□□ -0.56
SCAMP4-204ENST00000414057 CSDC2Q9Y534 153 aaKnown RBP11.57□□□□□ -0.56
SCAMP4-204ENST00000414057 C16orf90A8MZG2 172 aa11.56□□□□□ -0.56
SCAMP4-204ENST00000414057 UBE2L6O14933 153 aa11.56□□□□□ -0.56
SCAMP4-204ENST00000414057 ODF1Q14990 250 aa11.56□□□□□ -0.56
SCAMP4-204ENST00000414057 PMVKQ15126 192 aa11.56□□□□□ -0.56
SCAMP4-204ENST00000414057 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.55□□□□□ -0.56
SCAMP4-204ENST00000414057 IGKV2-29A2NJV5 120 aaPredicted RBP11.55□□□□□ -0.56
SCAMP4-204ENST00000414057 ZNF25P17030 456 aaPredicted RBP11.55□□□□□ -0.56
SCAMP4-204ENST00000414057 MRPS36P82909 103 aaKnown RBP11.55□□□□□ -0.56
SCAMP4-204ENST00000414057 KRTAP17-1Q9BYP8 105 aa11.55□□□□□ -0.56
SCAMP4-204ENST00000414057 IGLV4-3A0A075B6K6 122 aa11.54□□□□□ -0.56
SCAMP4-204ENST00000414057 SIVA1O15304 175 aa11.54□□□□□ -0.56
SCAMP4-204ENST00000414057 VAMP8Q9BV40 100 aa11.54□□□□□ -0.56
SCAMP4-204ENST00000414057 F8VRH5 84 aa11.53□□□□□ -0.56
SCAMP4-204ENST00000414057 PLNP26678 52 aa11.53□□□□□ -0.56
SCAMP4-204ENST00000414057 TIRAPP58753 221 aa11.53□□□□□ -0.56
SCAMP4-204ENST00000414057 DGAT2L7PQ6IED9 249 aa11.53□□□□□ -0.56
SCAMP4-204ENST00000414057 CDPF1Q6NVV7 123 aa11.53□□□□□ -0.56
SCAMP4-204ENST00000414057 FGF6P10767 208 aa11.52□□□□□ -0.56
SCAMP4-204ENST00000414057 PKIAP61925 76 aa11.52□□□□□ -0.56
SCAMP4-204ENST00000414057 KRTAP1-5Q9BYS1 174 aa11.52□□□□□ -0.56
SCAMP4-204ENST00000414057 VCX2Q9H322 139 aa11.52□□□□□ -0.56
SCAMP4-204ENST00000414057 CST9LQ9H4G1 147 aa11.52□□□□□ -0.56
SCAMP4-204ENST00000414057 CHTOPQ9Y3Y2 248 aaKnown RBP11.52□□□□□ -0.56
SCAMP4-204ENST00000414057 TRAV9-2A0A087WT02 112 aa11.51□□□□□ -0.57
SCAMP4-204ENST00000414057 HSBP1L1C9JCN9 74 aa11.51□□□□□ -0.57
SCAMP4-204ENST00000414057 DPM2O94777 84 aa11.51□□□□□ -0.57
SCAMP4-204ENST00000414057 AMMECR1LQ6DCA0 310 aa11.51□□□□□ -0.57
SCAMP4-204ENST00000414057 TMEM101Q96IK0 257 aa11.51□□□□□ -0.57
SCAMP4-204ENST00000414057 AMELXQ99217 191 aa11.51□□□□□ -0.57
SCAMP4-204ENST00000414057 IGKCP01834 107 aa11.51□□□□□ -0.57
SCAMP4-204ENST00000414057 CHCHD5Q9BSY4 110 aa11.51□□□□□ -0.57
SCAMP4-204ENST00000414057 MRPL35Q9NZE8 188 aaKnown RBP11.51□□□□□ -0.57
SCAMP4-204ENST00000414057 LYPD5Q6UWN5 251 aa11.5□□□□□ -0.57
SCAMP4-204ENST00000414057 OR5A1Q8NGJ0 315 aa11.5□□□□□ -0.57
SCAMP4-204ENST00000414057 PMCHL2Q9BQD1 86 aa11.5□□□□□ -0.57
SCAMP4-204ENST00000414057 C2orf88Q9BSF0 95 aa11.5□□□□□ -0.57
SCAMP4-204ENST00000414057 LELP1Q5T871 98 aa11.49□□□□□ -0.57
SCAMP4-204ENST00000414057 ATOH7Q8N100 152 aa11.49□□□□□ -0.57
SCAMP4-204ENST00000414057 FAM104AQ969W3 186 aa11.49□□□□□ -0.57
SCAMP4-204ENST00000414057 A0A1B0GUV1 79 aa11.48□□□□□ -0.57
SCAMP4-204ENST00000414057 K7EP13 123 aa11.48□□□□□ -0.57
SCAMP4-204ENST00000414057 CDK2AP2O75956 126 aa11.48□□□□□ -0.57
SCAMP4-204ENST00000414057 OPRPNQ99935 248 aaPredicted RBP11.48□□□□□ -0.57
SCAMP4-204ENST00000414057 Q6ZUT4 128 aa11.47□□□□□ -0.57
SCAMP4-204ENST00000414057 NFE4Q86UQ8 179 aa11.47□□□□□ -0.57
SCAMP4-204ENST00000414057 ZNF664Q8N3J9 261 aa11.47□□□□□ -0.57
SCAMP4-204ENST00000414057 PAM16Q9Y3D7 125 aa11.47□□□□□ -0.57
SCAMP4-204ENST00000414057 GAGE6Q13070 117 aa11.46□□□□□ -0.57
SCAMP4-204ENST00000414057 SPATA45Q537H7 98 aa11.46□□□□□ -0.57
SCAMP4-204ENST00000414057 CDC42SE2Q9NRR3 84 aa11.46□□□□□ -0.57
SCAMP4-204ENST00000414057 TSTD3H0UI37 97 aa11.45□□□□□ -0.58
SCAMP4-204ENST00000414057 EREGO14944 169 aa11.45□□□□□ -0.58
SCAMP4-204ENST00000414057 IGLV4-69A0A075B6H9 119 aa11.44□□□□□ -0.58
SCAMP4-204ENST00000414057 IGLC3P0DOY3 106 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 215.4 ms