RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 XGP55808 180 aa10.79□□□□□ -0.68
TTC39A-208ENST00000413473 ATXN8Q156A1 80 aa10.79□□□□□ -0.68
TTC39A-208ENST00000413473 MIAQ16674 131 aa10.79□□□□□ -0.68
TTC39A-208ENST00000413473 C11orf44Q8N8P7 122 aa10.79□□□□□ -0.68
TTC39A-208ENST00000413473 ITPR3Q14573 2671 aa10.79□□□□□ -0.68
TTC39A-208ENST00000413473 ZFAND6Q6FIF0 208 aa10.78□□□□□ -0.68
TTC39A-208ENST00000413473 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.78□□□□□ -0.68
TTC39A-208ENST00000413473 APCP25054 2843 aa10.78□□□□□ -0.68
TTC39A-208ENST00000413473 LINC01620Q4KN68 170 aa10.78□□□□□ -0.68
TTC39A-208ENST00000413473 Q6ZSV7 163 aa10.78□□□□□ -0.68
TTC39A-208ENST00000413473 C1orf158Q8N1D5 194 aa10.78□□□□□ -0.68
TTC39A-208ENST00000413473 TRGV1A0A0A0MS02 117 aa10.77□□□□□ -0.69
TTC39A-208ENST00000413473 STHQ8IWL8 128 aa10.77□□□□□ -0.69
TTC39A-208ENST00000413473 M0QXV9 152 aa10.77□□□□□ -0.69
TTC39A-208ENST00000413473 TIRAPP58753 221 aa10.77□□□□□ -0.69
TTC39A-208ENST00000413473 COX6A2Q02221 97 aa10.77□□□□□ -0.69
TTC39A-208ENST00000413473 DAND5Q8N907 189 aa10.77□□□□□ -0.69
TTC39A-208ENST00000413473 TMEM101Q96IK0 257 aa10.77□□□□□ -0.69
TTC39A-208ENST00000413473 A0A1W2PRX2 142 aa10.76□□□□□ -0.69
TTC39A-208ENST00000413473 ICOSQ9Y6W8 199 aa10.76□□□□□ -0.69
TTC39A-208ENST00000413473 NIPBLQ6KC79 2804 aaeCLIP10.75□□□□□ -0.69
TTC39A-208ENST00000413473 A0A1B0GV72 72 aa10.75□□□□□ -0.69
TTC39A-208ENST00000413473 IGLV5-45A0A087WSX0 123 aa10.75□□□□□ -0.69
TTC39A-208ENST00000413473 LINC00694P0DN24 101 aa10.75□□□□□ -0.69
TTC39A-208ENST00000413473 NTN5Q8WTR8 489 aaPredicted RBP10.75□□□□□ -0.69
TTC39A-208ENST00000413473 CLUHP3Q96NS8 147 aa10.75□□□□□ -0.69
TTC39A-208ENST00000413473 NBPF19A0A087WUL8 3843 aa10.74□□□□□ -0.69
TTC39A-208ENST00000413473 CKS1BP61024 79 aa10.74□□□□□ -0.69
TTC39A-208ENST00000413473 LRRC75A-AS1Q8N1F1 130 aa10.74□□□□□ -0.69
TTC39A-208ENST00000413473 YAE1D1Q9NRH1 226 aa10.74□□□□□ -0.69
TTC39A-208ENST00000413473 CIDEAO60543 219 aa10.74□□□□□ -0.69
TTC39A-208ENST00000413473 FLNAP21333 2647 aaKnown RBP10.74□□□□□ -0.69
TTC39A-208ENST00000413473 NDUFA7O95182 113 aa10.73□□□□□ -0.69
TTC39A-208ENST00000413473 LINC00242Q5T6M2 205 aa10.73□□□□□ -0.69
TTC39A-208ENST00000413473 Q6ZTI0 123 aa10.73□□□□□ -0.69
TTC39A-208ENST00000413473 TRBV10-2A0A0K0K1G8 114 aa10.73□□□□□ -0.69
TTC39A-208ENST00000413473 TMEM262E9PQX1 116 aa10.73□□□□□ -0.69
TTC39A-208ENST00000413473 NDUFA1O15239 70 aa10.73□□□□□ -0.69
TTC39A-208ENST00000413473 TIMM17BO60830 172 aa10.73□□□□□ -0.69
TTC39A-208ENST00000413473 TRAV25A0A0B4J276 109 aa10.72□□□□□ -0.69
TTC39A-208ENST00000413473 COX6CP09669 75 aa10.72□□□□□ -0.69
TTC39A-208ENST00000413473 KRTAP1-3Q8IUG1 177 aa10.72□□□□□ -0.69
TTC39A-208ENST00000413473 HERVK_113P63121 156 aa10.72□□□□□ -0.69
TTC39A-208ENST00000413473 RPL36AP83881 106 aaKnown RBP10.72□□□□□ -0.69
TTC39A-208ENST00000413473 IL17DQ8TAD2 202 aa10.72□□□□□ -0.69
TTC39A-208ENST00000413473 RPL36ALQ969Q0 106 aaKnown RBP10.72□□□□□ -0.69
TTC39A-208ENST00000413473 RNF183Q96D59 192 aa10.72□□□□□ -0.69
TTC39A-208ENST00000413473 ZNF625Q96I27 306 aaPredicted RBP10.72□□□□□ -0.69
TTC39A-208ENST00000413473 SETXQ7Z333 2677 aaKnown RBP10.72□□□□□ -0.69
TTC39A-208ENST00000413473 TEX49A0A1B0GTD5 131 aa10.71□□□□□ -0.69
TTC39A-208ENST00000413473 CCL24O00175 119 aa10.71□□□□□ -0.69
TTC39A-208ENST00000413473 IFITM1P13164 125 aa10.71□□□□□ -0.69
TTC39A-208ENST00000413473 NTM-AS1Q6ZSK4 140 aa10.71□□□□□ -0.69
TTC39A-208ENST00000413473 ZNF843Q8N446 348 aa10.71□□□□□ -0.69
TTC39A-208ENST00000413473 TMEM86BQ8N661 226 aa10.71□□□□□ -0.69
TTC39A-208ENST00000413473 Q9H8V8 135 aa10.71□□□□□ -0.69
TTC39A-208ENST00000413473 ACANP16112 2415 aa10.71□□□□□ -0.69
TTC39A-208ENST00000413473 TRAV13-1A0A0B4J241 112 aa10.71□□□□□ -0.69
TTC39A-208ENST00000413473 MTORP42345 2549 aa10.71□□□□□ -0.7
TTC39A-208ENST00000413473 A0A0U1RRA0 63 aa10.71□□□□□ -0.7
TTC39A-208ENST00000413473 DNAJC9-AS1A6NH13 148 aa10.71□□□□□ -0.7
TTC39A-208ENST00000413473 RPL13AP40429 203 aaKnown RBP10.71□□□□□ -0.7
TTC39A-208ENST00000413473 CIRBPQ14011 172 aaKnown RBP10.71□□□□□ -0.7
TTC39A-208ENST00000413473 CLEC2BQ92478 149 aa10.71□□□□□ -0.7
TTC39A-208ENST00000413473 IGLV5-39A0A0G2JS06 123 aa10.7□□□□□ -0.7
TTC39A-208ENST00000413473 K7EQD1 137 aa10.7□□□□□ -0.7
TTC39A-208ENST00000413473 H7C423 109 aa10.7□□□□□ -0.7
TTC39A-208ENST00000413473 C2orf82Q6UX34 121 aa10.7□□□□□ -0.7
TTC39A-208ENST00000413473 LINC01600Q96MT4 127 aa10.7□□□□□ -0.7
TTC39A-208ENST00000413473 TRBV10-1A0A0K0K1A3 114 aa10.69□□□□□ -0.7
TTC39A-208ENST00000413473 GAGE12JA6NER3 117 aa10.69□□□□□ -0.7
TTC39A-208ENST00000413473 GAGE4Q13068 117 aa10.69□□□□□ -0.7
TTC39A-208ENST00000413473 GAGE5Q13069 117 aa10.69□□□□□ -0.7
TTC39A-208ENST00000413473 DAZ2Q13117 558 aaKnown RBP10.69□□□□□ -0.7
TTC39A-208ENST00000413473 DAZ4Q86SG3 579 aaKnown RBP10.69□□□□□ -0.7
TTC39A-208ENST00000413473 DAZ3Q9NR90 486 aaKnown RBP10.69□□□□□ -0.7
TTC39A-208ENST00000413473 LINC00308Q8TCZ7 52 aa10.68□□□□□ -0.7
TTC39A-208ENST00000413473 NOP10Q9NPE3 64 aaKnown RBP10.68□□□□□ -0.7
TTC39A-208ENST00000413473 SMIM1B2RUZ4 78 aa10.68□□□□□ -0.7
TTC39A-208ENST00000413473 CITED2Q99967 270 aaPredicted RBP10.68□□□□□ -0.7
TTC39A-208ENST00000413473 ESM1Q9NQ30 184 aa10.68□□□□□ -0.7
TTC39A-208ENST00000413473 CSDC2Q9Y534 153 aaKnown RBP10.68□□□□□ -0.7
TTC39A-208ENST00000413473 TRAV4A0A0B4J268 109 aa10.67□□□□□ -0.7
TTC39A-208ENST00000413473 WFDC11Q8NEX6 87 aa10.67□□□□□ -0.7
TTC39A-208ENST00000413473 CDC42SE2Q9NRR3 84 aa10.67□□□□□ -0.7
TTC39A-208ENST00000413473 LST1O00453 97 aa10.67□□□□□ -0.7
TTC39A-208ENST00000413473 FAM19A3Q7Z5A8 133 aa10.66□□□□□ -0.7
TTC39A-208ENST00000413473 UBE2WQ96B02 151 aa10.66□□□□□ -0.7
TTC39A-208ENST00000413473 GIG44P09565 113 aaPredicted RBP10.65□□□□□ -0.7
TTC39A-208ENST00000413473 PRIMA1Q86XR5 153 aa10.65□□□□□ -0.7
TTC39A-208ENST00000413473 WFDC10AQ9H1F0 79 aa10.64□□□□□ -0.71
TTC39A-208ENST00000413473 H3BT86 120 aa10.64□□□□□ -0.71
TTC39A-208ENST00000413473 SOSTDC1Q6X4U4 206 aa10.64□□□□□ -0.71
TTC39A-208ENST00000413473 TRAV8-4A0A0B4J246 113 aa10.64□□□□□ -0.71
TTC39A-208ENST00000413473 F5H768 121 aa10.64□□□□□ -0.71
TTC39A-208ENST00000413473 MEIG1Q5JSS6 88 aa10.64□□□□□ -0.71
TTC39A-208ENST00000413473 GAGE7O76087 117 aa10.63□□□□□ -0.71
TTC39A-208ENST00000413473 GAGE12FP0CL80 117 aa10.63□□□□□ -0.71
TTC39A-208ENST00000413473 GAGE12GP0CL81 117 aa10.63□□□□□ -0.71
TTC39A-208ENST00000413473 GAGE12IP0CL82 117 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms