RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 MAP6D1Q9H9H5 199 aa12.69□□□□□ -0.38
SDCBP-202ENST00000413219 PEMTQ9UBM1 199 aa12.69□□□□□ -0.38
SDCBP-202ENST00000413219 TRACP01848 142 aa12.68□□□□□ -0.38
SDCBP-202ENST00000413219 CELSR1Q9NYQ6 3014 aa12.67□□□□□ -0.38
SDCBP-202ENST00000413219 SMIM1B2RUZ4 78 aa12.67□□□□□ -0.38
SDCBP-202ENST00000413219 HERV-K104P63124 156 aa12.66□□□□□ -0.38
SDCBP-202ENST00000413219 Q6YL49 198 aa12.66□□□□□ -0.38
SDCBP-202ENST00000413219 ZNF625Q96I27 306 aaPredicted RBP12.66□□□□□ -0.38
SDCBP-202ENST00000413219 SOSTDC1Q6X4U4 206 aa12.65□□□□□ -0.38
SDCBP-202ENST00000413219 TRBV10-1A0A0K0K1A3 114 aa12.64□□□□□ -0.39
SDCBP-202ENST00000413219 FSHBP01225 129 aa12.64□□□□□ -0.39
SDCBP-202ENST00000413219 DEFB136Q30KP8 78 aa12.64□□□□□ -0.39
SDCBP-202ENST00000413219 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.64□□□□□ -0.39
SDCBP-202ENST00000413219 SORL1Q92673 2214 aa12.63□□□□□ -0.39
SDCBP-202ENST00000413219 A0A096LNT2 108 aa12.63□□□□□ -0.39
SDCBP-202ENST00000413219 PRIMA1Q86XR5 153 aa12.63□□□□□ -0.39
SDCBP-202ENST00000413219 IL17DQ8TAD2 202 aa12.63□□□□□ -0.39
SDCBP-202ENST00000413219 FAM222AQ5U5X8 452 aa12.63□□□□□ -0.39
SDCBP-202ENST00000413219 C18orf65Q6ZTR6 163 aa12.63□□□□□ -0.39
SDCBP-202ENST00000413219 RPL36AP83881 106 aaKnown RBP12.62□□□□□ -0.39
SDCBP-202ENST00000413219 DAZ2Q13117 558 aaKnown RBP12.62□□□□□ -0.39
SDCBP-202ENST00000413219 MEIG1Q5JSS6 88 aa12.62□□□□□ -0.39
SDCBP-202ENST00000413219 DAZ4Q86SG3 579 aaKnown RBP12.62□□□□□ -0.39
SDCBP-202ENST00000413219 LINC00643Q86TS7 51 aa12.62□□□□□ -0.39
SDCBP-202ENST00000413219 DYNLRB2Q8TF09 96 aa12.62□□□□□ -0.39
SDCBP-202ENST00000413219 RPL36ALQ969Q0 106 aaKnown RBP12.62□□□□□ -0.39
SDCBP-202ENST00000413219 DAZ3Q9NR90 486 aaKnown RBP12.62□□□□□ -0.39
SDCBP-202ENST00000413219 F5H768 121 aa12.61□□□□□ -0.39
SDCBP-202ENST00000413219 LINC00694P0DN24 101 aa12.61□□□□□ -0.39
SDCBP-202ENST00000413219 Q8N2B8 174 aa12.61□□□□□ -0.39
SDCBP-202ENST00000413219 C4orf3Q8WVX3 66 aa12.61□□□□□ -0.39
SDCBP-202ENST00000413219 PF4P02776 101 aa12.61□□□□□ -0.39
SDCBP-202ENST00000413219 SDIM1Q6ZPB5 146 aa12.61□□□□□ -0.39
SDCBP-202ENST00000413219 DEFB114Q30KQ6 69 aa12.6□□□□□ -0.39
SDCBP-202ENST00000413219 A0A0U1RRA0 63 aa12.6□□□□□ -0.39
SDCBP-202ENST00000413219 K7EQD1 137 aa12.6□□□□□ -0.39
SDCBP-202ENST00000413219 CDC42SE2Q9NRR3 84 aa12.6□□□□□ -0.39
SDCBP-202ENST00000413219 TRAV13-1A0A0B4J241 112 aa12.59□□□□□ -0.39
SDCBP-202ENST00000413219 BAALC-AS2P0C853 105 aa12.59□□□□□ -0.39
SDCBP-202ENST00000413219 CHCHD5Q9BSY4 110 aa12.59□□□□□ -0.39
SDCBP-202ENST00000413219 NTM-AS1Q6ZSK4 140 aa12.58□□□□□ -0.39
SDCBP-202ENST00000413219 CSPG4Q6UVK1 2322 aa12.58□□□□□ -0.4
SDCBP-202ENST00000413219 TRGV1A0A0A0MS02 117 aa12.57□□□□□ -0.4
SDCBP-202ENST00000413219 TRAV13-2A0A0B4J235 113 aa12.57□□□□□ -0.4
SDCBP-202ENST00000413219 NDUFA7O95182 113 aa12.57□□□□□ -0.4
SDCBP-202ENST00000413219 HIST2H2BCQ6DN03 193 aa12.57□□□□□ -0.4
SDCBP-202ENST00000413219 HIST2H2BDQ6DRA6 164 aa12.57□□□□□ -0.4
SDCBP-202ENST00000413219 XCL2Q9UBD3 114 aa12.57□□□□□ -0.4
SDCBP-202ENST00000413219 INAFM2P0DMQ5 153 aa12.57□□□□□ -0.4
SDCBP-202ENST00000413219 C1orf158Q8N1D5 194 aa12.57□□□□□ -0.4
SDCBP-202ENST00000413219 SMCR5Q8TEV8 140 aa12.57□□□□□ -0.4
SDCBP-202ENST00000413219 FAM110AQ9BQ89 295 aa12.57□□□□□ -0.4
SDCBP-202ENST00000413219 TMEM126AQ9H061 195 aa12.57□□□□□ -0.4
SDCBP-202ENST00000413219 RPL28P46779 137 aaKnown RBP12.56□□□□□ -0.4
SDCBP-202ENST00000413219 C22orf24Q9Y442 160 aa12.56□□□□□ -0.4
SDCBP-202ENST00000413219 FAM236AA0A1B0GUQ0 79 aa12.55□□□□□ -0.4
SDCBP-202ENST00000413219 FAM236BA0A1B0GV22 79 aa12.55□□□□□ -0.4
SDCBP-202ENST00000413219 ATP5G1P05496 136 aa12.55□□□□□ -0.4
SDCBP-202ENST00000413219 OVOL2Q9BRP0 275 aa12.55□□□□□ -0.4
SDCBP-202ENST00000413219 TRAV25A0A0B4J276 109 aa12.55□□□□□ -0.4
SDCBP-202ENST00000413219 VPS13CQ709C8 3753 aa12.55□□□□□ -0.4
SDCBP-202ENST00000413219 CXCL5P42830 114 aa12.54□□□□□ -0.4
SDCBP-202ENST00000413219 ODF3L2Q3SX64 289 aa12.54□□□□□ -0.4
SDCBP-202ENST00000413219 STHQ8IWL8 128 aa12.54□□□□□ -0.4
SDCBP-202ENST00000413219 NRGNQ92686 78 aa12.54□□□□□ -0.4
SDCBP-202ENST00000413219 FAM218AQ96MZ4 157 aa12.54□□□□□ -0.4
SDCBP-202ENST00000413219 CRPP02741 224 aa12.53□□□□□ -0.4
SDCBP-202ENST00000413219 Q96MF0 132 aa12.53□□□□□ -0.4
SDCBP-202ENST00000413219 TMEM243Q9BU79 118 aa12.53□□□□□ -0.4
SDCBP-202ENST00000413219 UBE2L6O14933 153 aa12.52□□□□□ -0.41
SDCBP-202ENST00000413219 Q6ZTI0 123 aa12.52□□□□□ -0.41
SDCBP-202ENST00000413219 CREBBPQ92793 2442 aa12.51□□□□□ -0.41
SDCBP-202ENST00000413219 MALP21145 153 aa12.51□□□□□ -0.41
SDCBP-202ENST00000413219 MAPK1IP1LQ8NDC0 245 aa12.51□□□□□ -0.41
SDCBP-202ENST00000413219 IGHV4-31P0DP07 118 aa12.5□□□□□ -0.41
SDCBP-202ENST00000413219 C5orf38Q86SI9 138 aa12.5□□□□□ -0.41
SDCBP-202ENST00000413219 SMIM20Q8N5G0 67 aa12.5□□□□□ -0.41
SDCBP-202ENST00000413219 COX7B2Q8TF08 81 aa12.5□□□□□ -0.41
SDCBP-202ENST00000413219 COL12A1Q99715 3063 aa12.5□□□□□ -0.41
SDCBP-202ENST00000413219 KHDC1LQ5JSQ8 128 aa12.5□□□□□ -0.41
SDCBP-202ENST00000413219 SPG11Q96JI7 2443 aa12.48□□□□□ -0.41
SDCBP-202ENST00000413219 MIR7-3HGQ8N6C7 128 aa12.48□□□□□ -0.41
SDCBP-202ENST00000413219 LINC00337Q8N6G1 96 aa12.48□□□□□ -0.41
SDCBP-202ENST00000413219 ITPR1Q14643 2758 aa12.48□□□□□ -0.41
SDCBP-202ENST00000413219 C3orf22Q8N5N4 141 aa12.47□□□□□ -0.41
SDCBP-202ENST00000413219 SND1-IT1Q9HBX3 110 aa12.47□□□□□ -0.41
SDCBP-202ENST00000413219 IGKV2-28A0A075B6P5 120 aa12.47□□□□□ -0.41
SDCBP-202ENST00000413219 IGKV2D-28P01615 120 aa12.47□□□□□ -0.41
SDCBP-202ENST00000413219 H0YGX0 51 aa12.46□□□□□ -0.41
SDCBP-202ENST00000413219 UQCRQO14949 82 aa12.46□□□□□ -0.41
SDCBP-202ENST00000413219 GAGE2AQ6NT46 116 aa12.46□□□□□ -0.42
SDCBP-202ENST00000413219 Q9HAA7 133 aa12.46□□□□□ -0.42
SDCBP-202ENST00000413219 DOPEY1Q5JWR5 2465 aa12.44□□□□□ -0.42
SDCBP-202ENST00000413219 DNAL4O96015 105 aa12.44□□□□□ -0.42
SDCBP-202ENST00000413219 NCOR2Q9Y618 2525 aa12.44□□□□□ -0.42
SDCBP-202ENST00000413219 TRBV6-4A0A1B0GX49 114 aa12.44□□□□□ -0.42
SDCBP-202ENST00000413219 SMIM11BQ8TCY0 68 aa12.44□□□□□ -0.42
SDCBP-202ENST00000413219 LINC00526Q96FQ7 95 aa12.44□□□□□ -0.42
SDCBP-202ENST00000413219 NOP10Q9NPE3 64 aaKnown RBP12.44□□□□□ -0.42
SDCBP-202ENST00000413219 CRYBG3Q68DQ2 2970 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms