RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 MRPL52Q86TS9 123 aaKnown RBP7.21□□□□□ -1.26
CHMP3-205ENST00000409810 MAPKAPK5-AS1Q8N8E1 139 aa7.21□□□□□ -1.26
CHMP3-205ENST00000409810 IGLV10-54A0A075B6I4 117 aa7.2□□□□□ -1.26
CHMP3-205ENST00000409810 IGKV3OR2-268A0A0C4DH90 116 aa7.2□□□□□ -1.26
CHMP3-205ENST00000409810 GCSHP23434 173 aa7.2□□□□□ -1.26
CHMP3-205ENST00000409810 WFDC2Q14508 124 aa7.2□□□□□ -1.26
CHMP3-205ENST00000409810 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.19□□□□□ -1.26
CHMP3-205ENST00000409810 PRSS47A8MTI9 375 aa7.19□□□□□ -1.26
CHMP3-205ENST00000409810 CDK2AP2O75956 126 aa7.19□□□□□ -1.26
CHMP3-205ENST00000409810 MT-ND6P03923 174 aa7.19□□□□□ -1.26
CHMP3-205ENST00000409810 GNB1LQ9BYB4 327 aa7.19□□□□□ -1.26
CHMP3-205ENST00000409810 UBE2D4Q9Y2X8 147 aa7.19□□□□□ -1.26
CHMP3-205ENST00000409810 CSDC2Q9Y534 153 aaKnown RBP7.19□□□□□ -1.26
CHMP3-205ENST00000409810 LOC389332A0A1B0GUA5 103 aa7.18□□□□□ -1.26
CHMP3-205ENST00000409810 USP17L23D6RBM5 183 aa7.18□□□□□ -1.26
CHMP3-205ENST00000409810 FUSP35637 526 aaKnown RBP eCLIP7.18□□□□□ -1.26
CHMP3-205ENST00000409810 ZNF664Q8N3J9 261 aa7.18□□□□□ -1.26
CHMP3-205ENST00000409810 Q8N8P6 123 aa7.18□□□□□ -1.26
CHMP3-205ENST00000409810 TIMM21Q9BVV7 248 aa7.18□□□□□ -1.26
CHMP3-205ENST00000409810 CDC42SE2Q9NRR3 84 aa7.18□□□□□ -1.26
CHMP3-205ENST00000409810 K7EMI3 77 aa7.17□□□□□ -1.26
CHMP3-205ENST00000409810 SS18Q15532 418 aa7.17□□□□□ -1.26
CHMP3-205ENST00000409810 CFAP161Q6P656 301 aa7.17□□□□□ -1.26
CHMP3-205ENST00000409810 KRTAP26-1Q6PEX3 210 aa7.17□□□□□ -1.26
CHMP3-205ENST00000409810 CHCHD10Q8WYQ3 142 aaPredicted RBP7.17□□□□□ -1.26
CHMP3-205ENST00000409810 NXT2Q9NPJ8 142 aaKnown RBP7.17□□□□□ -1.26
CHMP3-205ENST00000409810 SPANXA1Q9NS26 97 aa7.17□□□□□ -1.26
CHMP3-205ENST00000409810 GAGE12HA6NDE8 117 aa7.16□□□□□ -1.26
CHMP3-205ENST00000409810 CCL25O15444 150 aa7.16□□□□□ -1.26
CHMP3-205ENST00000409810 IFI27P40305 119 aaPredicted RBP7.16□□□□□ -1.26
CHMP3-205ENST00000409810 ORMDL2Q53FV1 153 aa7.16□□□□□ -1.26
CHMP3-205ENST00000409810 LINC00959A0A1B0GUT2 108 aa7.15□□□□□ -1.26
CHMP3-205ENST00000409810 G0S2P27469 103 aa7.15□□□□□ -1.26
CHMP3-205ENST00000409810 RPL39P62891 51 aaKnown RBP7.15□□□□□ -1.26
CHMP3-205ENST00000409810 KIAA1644Q3SXP7 199 aa7.15□□□□□ -1.26
CHMP3-205ENST00000409810 MRPL18Q9H0U6 180 aaKnown RBP7.15□□□□□ -1.26
CHMP3-205ENST00000409810 AP5S1Q9NUS5 200 aa7.15□□□□□ -1.26
CHMP3-205ENST00000409810 C1orf196B1AJZ1 125 aa7.14□□□□□ -1.27
CHMP3-205ENST00000409810 XCL1P47992 114 aa7.14□□□□□ -1.27
CHMP3-205ENST00000409810 KRTAP10-1P60331 282 aa7.14□□□□□ -1.27
CHMP3-205ENST00000409810 MRPS36P82909 103 aaKnown RBP7.14□□□□□ -1.27
CHMP3-205ENST00000409810 FABP9Q0Z7S8 132 aa7.14□□□□□ -1.27
CHMP3-205ENST00000409810 Q6ZUT4 128 aa7.14□□□□□ -1.27
CHMP3-205ENST00000409810 CYSLTR1Q9Y271 337 aa7.14□□□□□ -1.27
CHMP3-205ENST00000409810 APOBP04114 4563 aaKnown RBP7.14□□□□□ -1.27
CHMP3-205ENST00000409810 HSPG2P98160 4391 aa7.13□□□□□ -1.27
CHMP3-205ENST00000409810 TGIF2-C20orf24A0A0A6YYL0 155 aa7.13□□□□□ -1.27
CHMP3-205ENST00000409810 TRAV13-1A0A0B4J241 112 aa7.13□□□□□ -1.27
CHMP3-205ENST00000409810 hDV102S1A0JD36 115 aa7.13□□□□□ -1.27
CHMP3-205ENST00000409810 PRSS1P07477 247 aa7.13□□□□□ -1.27
CHMP3-205ENST00000409810 CD164L2Q6UWJ8 174 aa7.13□□□□□ -1.27
CHMP3-205ENST00000409810 PYGO1Q9Y3Y4 419 aa7.13□□□□□ -1.27
CHMP3-205ENST00000409810 TRAPPC1Q9Y5R8 145 aa7.13□□□□□ -1.27
CHMP3-205ENST00000409810 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.12□□□□□ -1.27
CHMP3-205ENST00000409810 FOXI1Q12951 378 aa7.12□□□□□ -1.27
CHMP3-205ENST00000409810 RNASE13Q5GAN3 156 aaKnown RBP7.12□□□□□ -1.27
CHMP3-205ENST00000409810 C2orf66Q6UXQ4 117 aa7.12□□□□□ -1.27
CHMP3-205ENST00000409810 Q6ZN92 141 aa7.12□□□□□ -1.27
CHMP3-205ENST00000409810 PRSS3P2Q8NHM4 247 aa7.12□□□□□ -1.27
CHMP3-205ENST00000409810 ALKBH7Q9BT30 221 aaPredicted RBP7.12□□□□□ -1.27
CHMP3-205ENST00000409810 KIAA1109Q2LD37 5005 aa7.11□□□□□ -1.27
CHMP3-205ENST00000409810 IGHV1-58A0A0C4DH39 117 aa7.11□□□□□ -1.27
CHMP3-205ENST00000409810 NPSP0C0P6 89 aa7.11□□□□□ -1.27
CHMP3-205ENST00000409810 SLC7A5P1Q8MH63 180 aa7.11□□□□□ -1.27
CHMP3-205ENST00000409810 TMEM141Q96I45 108 aa7.11□□□□□ -1.27
CHMP3-205ENST00000409810 SMCO4Q9NRQ5 59 aa7.11□□□□□ -1.27
CHMP3-205ENST00000409810 RYR1P21817 5038 aa7.11□□□□□ -1.27
CHMP3-205ENST00000409810 HERC2O95714 4834 aa7.1□□□□□ -1.27
CHMP3-205ENST00000409810 LINC01549A6NIU2 74 aa7.1□□□□□ -1.27
CHMP3-205ENST00000409810 IFITM10A6NMD0 228 aa7.1□□□□□ -1.27
CHMP3-205ENST00000409810 COX7A2LO14548 114 aa7.1□□□□□ -1.27
CHMP3-205ENST00000409810 MALP21145 153 aa7.1□□□□□ -1.27
CHMP3-205ENST00000409810 CNBPP62633 177 aaKnown RBP7.1□□□□□ -1.27
CHMP3-205ENST00000409810 TEX43Q6ZNM6 134 aa7.1□□□□□ -1.27
CHMP3-205ENST00000409810 FA2HQ7L5A8 372 aa7.1□□□□□ -1.27
CHMP3-205ENST00000409810 C15orf56Q8N910 161 aa7.1□□□□□ -1.27
CHMP3-205ENST00000409810 C2orf88Q9BSF0 95 aa7.1□□□□□ -1.27
CHMP3-205ENST00000409810 IGLV4-3A0A075B6K6 122 aa7.09□□□□□ -1.27
CHMP3-205ENST00000409810 GVQW2A0A096LPI5 108 aaPredicted RBP7.09□□□□□ -1.27
CHMP3-205ENST00000409810 APOMO95445 188 aa7.09□□□□□ -1.27
CHMP3-205ENST00000409810 PAPPA-AS1Q5QFB9 102 aa7.09□□□□□ -1.27
CHMP3-205ENST00000409810 OPRPNQ99935 248 aaPredicted RBP7.09□□□□□ -1.27
CHMP3-205ENST00000409810 DNAH8Q96JB1 4490 aa7.08□□□□□ -1.28
CHMP3-205ENST00000409810 HIGD2BQ4VC39 106 aa7.08□□□□□ -1.28
CHMP3-205ENST00000409810 C9orf163Q8N9P6 203 aa7.08□□□□□ -1.28
CHMP3-205ENST00000409810 FAM104AQ969W3 186 aa7.08□□□□□ -1.28
CHMP3-205ENST00000409810 TOMM6Q96B49 74 aa7.08□□□□□ -1.28
CHMP3-205ENST00000409810 TIMM17AQ99595 171 aa7.08□□□□□ -1.28
CHMP3-205ENST00000409810 VCX2Q9H322 139 aa7.08□□□□□ -1.28
CHMP3-205ENST00000409810 LINC01546A6NGU7 62 aa7.07□□□□□ -1.28
CHMP3-205ENST00000409810 ZNF561-AS1K7EIQ3 104 aa7.07□□□□□ -1.28
CHMP3-205ENST00000409810 XGP55808 180 aa7.07□□□□□ -1.28
CHMP3-205ENST00000409810 RAB5BP61020 215 aa7.07□□□□□ -1.28
CHMP3-205ENST00000409810 LINC01620Q4KN68 170 aa7.07□□□□□ -1.28
CHMP3-205ENST00000409810 Q6ZSA8 131 aa7.07□□□□□ -1.28
CHMP3-205ENST00000409810 CBLN2Q8IUK8 224 aa7.07□□□□□ -1.28
CHMP3-205ENST00000409810 YPEL4Q96NS1 127 aa7.07□□□□□ -1.28
CHMP3-205ENST00000409810 PKIGQ9Y2B9 76 aa7.07□□□□□ -1.28
CHMP3-205ENST00000409810 IGHV3-64A0A075B6Q5 118 aa7.06□□□□□ -1.28
CHMP3-205ENST00000409810 IGIPA6NJ69 53 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms