RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 NTM-AS1Q6ZSK4 140 aa9.92□□□□□ -0.82
LIMS2-206ENST00000409754 C2orf91Q6ZV80 131 aa9.92□□□□□ -0.82
LIMS2-206ENST00000409754 MRPS36P82909 103 aaKnown RBP9.91□□□□□ -0.82
LIMS2-206ENST00000409754 CEMP1Q6PRD7 247 aaPredicted RBP9.91□□□□□ -0.82
LIMS2-206ENST00000409754 SBSPONQ8IVN8 264 aa9.91□□□□□ -0.82
LIMS2-206ENST00000409754 STAB2Q8WWQ8 2551 aa9.9□□□□□ -0.82
LIMS2-206ENST00000409754 E9PLD3 99 aa9.9□□□□□ -0.82
LIMS2-206ENST00000409754 DEFB4AO15263 64 aa9.9□□□□□ -0.82
LIMS2-206ENST00000409754 SMAGPQ0VAQ4 97 aa9.9□□□□□ -0.82
LIMS2-206ENST00000409754 PRO0255Q9UI72 69 aa9.9□□□□□ -0.82
LIMS2-206ENST00000409754 HERVK_113P61574 105 aa9.89□□□□□ -0.83
LIMS2-206ENST00000409754 DAD1P61803 113 aa9.89□□□□□ -0.83
LIMS2-206ENST00000409754 TMEM97Q5BJF2 176 aa9.89□□□□□ -0.83
LIMS2-206ENST00000409754 CSDC2Q9Y534 153 aaKnown RBP9.89□□□□□ -0.83
LIMS2-206ENST00000409754 SPART-AS1P0CW21 52 aa9.89□□□□□ -0.83
LIMS2-206ENST00000409754 BATFQ16520 125 aa9.89□□□□□ -0.83
LIMS2-206ENST00000409754 Q6ZUT4 128 aa9.89□□□□□ -0.83
LIMS2-206ENST00000409754 TMEM243Q9BU79 118 aa9.89□□□□□ -0.83
LIMS2-206ENST00000409754 CHAC1Q9BUX1 264 aa9.89□□□□□ -0.83
LIMS2-206ENST00000409754 H7C423 109 aa9.88□□□□□ -0.83
LIMS2-206ENST00000409754 HINT1P49773 126 aaPredicted RBP9.88□□□□□ -0.83
LIMS2-206ENST00000409754 DGAT2L7PQ6IED9 249 aa9.88□□□□□ -0.83
LIMS2-206ENST00000409754 CELA1Q9UNI1 258 aa9.88□□□□□ -0.83
LIMS2-206ENST00000409754 TRBV25-1A0A075B6N4 114 aa9.87□□□□□ -0.83
LIMS2-206ENST00000409754 TRAV8-6A0A0B4J262 113 aa9.87□□□□□ -0.83
LIMS2-206ENST00000409754 A0A0J9YXV3 536 aa9.87□□□□□ -0.83
LIMS2-206ENST00000409754 TEX48A0A1B0GUV7 120 aa9.87□□□□□ -0.83
LIMS2-206ENST00000409754 GYPEP15421 78 aa9.87□□□□□ -0.83
LIMS2-206ENST00000409754 TMEM170BQ5T4T1 132 aa9.87□□□□□ -0.83
LIMS2-206ENST00000409754 TTTY13Q9BZ97 58 aa9.87□□□□□ -0.83
LIMS2-206ENST00000409754 HIGD1BQ9P298 99 aa9.87□□□□□ -0.83
LIMS2-206ENST00000409754 ATP5G1P05496 136 aa9.86□□□□□ -0.83
LIMS2-206ENST00000409754 ZNF22P17026 224 aaPredicted RBP9.86□□□□□ -0.83
LIMS2-206ENST00000409754 MPV17L2Q567V2 206 aa9.86□□□□□ -0.83
LIMS2-206ENST00000409754 DEFB121Q5J5C9 76 aa9.86□□□□□ -0.83
LIMS2-206ENST00000409754 TRBV6-8A0A0A6YYG3 113 aa9.85□□□□□ -0.83
LIMS2-206ENST00000409754 UBE2L6O14933 153 aa9.85□□□□□ -0.83
LIMS2-206ENST00000409754 PAX4O43316 350 aa9.85□□□□□ -0.83
LIMS2-206ENST00000409754 RNASE13Q5GAN3 156 aaKnown RBP9.85□□□□□ -0.83
LIMS2-206ENST00000409754 COL5A1-AS1Q5SY13 56 aa9.85□□□□□ -0.83
LIMS2-206ENST00000409754 MAPKAPK5-AS1Q8N8E1 139 aa9.85□□□□□ -0.83
LIMS2-206ENST00000409754 ATP6V0E2Q8NHE4 81 aa9.85□□□□□ -0.83
LIMS2-206ENST00000409754 TINCRA0A1B0GVN0 87 aa9.85□□□□□ -0.83
LIMS2-206ENST00000409754 BVES-AS1Q5T3Y7 98 aa9.85□□□□□ -0.83
LIMS2-206ENST00000409754 B9D2Q9BPU9 175 aa9.85□□□□□ -0.83
LIMS2-206ENST00000409754 MYMXA0A1B0GTQ4 84 aa9.84□□□□□ -0.83
LIMS2-206ENST00000409754 TMEM223A0PJW6 202 aa9.84□□□□□ -0.83
LIMS2-206ENST00000409754 UBE2D1P51668 147 aa9.84□□□□□ -0.83
LIMS2-206ENST00000409754 HSD52Q0P140 79 aa9.84□□□□□ -0.83
LIMS2-206ENST00000409754 OR5A1Q8NGJ0 315 aa9.84□□□□□ -0.83
LIMS2-206ENST00000409754 ZNF25P17030 456 aaPredicted RBP9.83□□□□□ -0.84
LIMS2-206ENST00000409754 AMMECR1LQ6DCA0 310 aa9.83□□□□□ -0.84
LIMS2-206ENST00000409754 TMEM101Q96IK0 257 aa9.83□□□□□ -0.84
LIMS2-206ENST00000409754 VSIG2Q96IQ7 327 aa9.83□□□□□ -0.84
LIMS2-206ENST00000409754 RETNQ9HD89 108 aa9.83□□□□□ -0.84
LIMS2-206ENST00000409754 CDC42SE2Q9NRR3 84 aa9.83□□□□□ -0.84
LIMS2-206ENST00000409754 TIRAPP58753 221 aa9.82□□□□□ -0.84
LIMS2-206ENST00000409754 FAM19A3Q7Z5A8 133 aa9.82□□□□□ -0.84
LIMS2-206ENST00000409754 A0A1B0GV90 55 aa9.82□□□□□ -0.84
LIMS2-206ENST00000409754 C11orf68Q9H3H3 251 aaKnown RBP9.82□□□□□ -0.84
LIMS2-206ENST00000409754 ZNF815PA8K554 130 aa9.81□□□□□ -0.84
LIMS2-206ENST00000409754 F5H768 121 aa9.81□□□□□ -0.84
LIMS2-206ENST00000409754 LEPROTO15243 131 aa9.81□□□□□ -0.84
LIMS2-206ENST00000409754 IGLV5-45A0A087WSX0 123 aa9.8□□□□□ -0.84
LIMS2-206ENST00000409754 TRAV26-1A0A087WT03 109 aa9.8□□□□□ -0.84
LIMS2-206ENST00000409754 A0A0J9YY99 117 aa9.8□□□□□ -0.84
LIMS2-206ENST00000409754 SEC11AP67812 179 aa9.8□□□□□ -0.84
LIMS2-206ENST00000409754 GAGE6Q13070 117 aa9.8□□□□□ -0.84
LIMS2-206ENST00000409754 PLEKHB2Q96CS7 222 aa9.8□□□□□ -0.84
LIMS2-206ENST00000409754 CHCHD5Q9BSY4 110 aa9.8□□□□□ -0.84
LIMS2-206ENST00000409754 GEMIN7Q9H840 131 aaKnown RBP9.8□□□□□ -0.84
LIMS2-206ENST00000409754 J3QQQ9 107 aa9.79□□□□□ -0.84
LIMS2-206ENST00000409754 TSPEAR-AS2P59090 65 aa9.79□□□□□ -0.84
LIMS2-206ENST00000409754 C12orf74Q32Q52 190 aa9.79□□□□□ -0.84
LIMS2-206ENST00000409754 TM2D3Q9BRN9 247 aa9.79□□□□□ -0.84
LIMS2-206ENST00000409754 LGALS3P17931 250 aaKnown RBP9.78□□□□□ -0.84
LIMS2-206ENST00000409754 HERVK_113P63121 156 aa9.78□□□□□ -0.84
LIMS2-206ENST00000409754 TAL2Q16559 108 aa9.78□□□□□ -0.84
LIMS2-206ENST00000409754 LINC00469Q8N7U9 141 aa9.78□□□□□ -0.84
LIMS2-206ENST00000409754 ORAOV1Q8WV07 137 aa9.78□□□□□ -0.84
LIMS2-206ENST00000409754 LINC00242Q5T6M2 205 aa9.78□□□□□ -0.84
LIMS2-206ENST00000409754 SH2D6Q7Z4S9 175 aa9.78□□□□□ -0.84
LIMS2-206ENST00000409754 DNAH7Q8WXX0 4024 aa9.78□□□□□ -0.84
LIMS2-206ENST00000409754 IGHV1-58A0A0C4DH39 117 aa9.77□□□□□ -0.85
LIMS2-206ENST00000409754 H3BRM9 83 aa9.77□□□□□ -0.85
LIMS2-206ENST00000409754 HTN3P15516 51 aa9.77□□□□□ -0.85
LIMS2-206ENST00000409754 MRPL23Q16540 153 aaKnown RBP9.77□□□□□ -0.85
LIMS2-206ENST00000409754 A0A096LPF7 62 aa9.76□□□□□ -0.85
LIMS2-206ENST00000409754 TRAV13-1A0A0B4J241 112 aa9.76□□□□□ -0.85
LIMS2-206ENST00000409754 IGHV3-30-3P0DP02 117 aa9.76□□□□□ -0.85
LIMS2-206ENST00000409754 CDKN2A-AS1Q9UH64 79 aa9.76□□□□□ -0.85
LIMS2-206ENST00000409754 ICOSQ9Y6W8 199 aa9.76□□□□□ -0.85
LIMS2-206ENST00000409754 IGLV4-60A0A075B6I1 120 aa9.75□□□□□ -0.85
LIMS2-206ENST00000409754 IGHV3-64A0A075B6Q5 118 aa9.75□□□□□ -0.85
LIMS2-206ENST00000409754 A0A1B0GUV1 79 aa9.75□□□□□ -0.85
LIMS2-206ENST00000409754 COX6A2Q02221 97 aa9.75□□□□□ -0.85
LIMS2-206ENST00000409754 SCGB1D4Q6XE38 83 aa9.75□□□□□ -0.85
LIMS2-206ENST00000409754 A6NDN8 102 aa9.74□□□□□ -0.85
LIMS2-206ENST00000409754 CEND1Q8N111 149 aa9.74□□□□□ -0.85
LIMS2-206ENST00000409754 TM2D2Q9BX73 214 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms