RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 UBE2D4Q9Y2X8 147 aa11.21□□□□□ -0.61
TSPAN4-208ENST00000409531 ANGP03950 147 aaKnown RBP11.2□□□□□ -0.62
TSPAN4-208ENST00000409531 NPSP0C0P6 89 aa11.2□□□□□ -0.62
TSPAN4-208ENST00000409531 COA6Q5JTJ3 125 aaKnown RBP11.2□□□□□ -0.62
TSPAN4-208ENST00000409531 PYGO1Q9Y3Y4 419 aa11.2□□□□□ -0.62
TSPAN4-208ENST00000409531 DNAH6Q9C0G6 4158 aa11.2□□□□□ -0.62
TSPAN4-208ENST00000409531 NDUFA6P56556 154 aa11.19□□□□□ -0.62
TSPAN4-208ENST00000409531 Q8N976 141 aa11.19□□□□□ -0.62
TSPAN4-208ENST00000409531 S100A6P06703 90 aa11.18□□□□□ -0.62
TSPAN4-208ENST00000409531 LINC00310P59036 64 aa11.18□□□□□ -0.62
TSPAN4-208ENST00000409531 PAPPA-AS1Q5QFB9 102 aa11.18□□□□□ -0.62
TSPAN4-208ENST00000409531 ERASQ7Z444 233 aa11.18□□□□□ -0.62
TSPAN4-208ENST00000409531 TIMM17AQ99595 171 aa11.18□□□□□ -0.62
TSPAN4-208ENST00000409531 IGLV4-60A0A075B6I1 120 aa11.17□□□□□ -0.62
TSPAN4-208ENST00000409531 A0A096LNJ9 63 aa11.17□□□□□ -0.62
TSPAN4-208ENST00000409531 NBDYA0A0U1RRE5 68 aa11.17□□□□□ -0.62
TSPAN4-208ENST00000409531 MRPS36P82909 103 aaKnown RBP11.17□□□□□ -0.62
TSPAN4-208ENST00000409531 PMCHL1Q16048 86 aa11.17□□□□□ -0.62
TSPAN4-208ENST00000409531 LINC00336Q6ZUF6 198 aa11.17□□□□□ -0.62
TSPAN4-208ENST00000409531 Q8N3U1 123 aa11.17□□□□□ -0.62
TSPAN4-208ENST00000409531 SCGB3A1Q96QR1 104 aa11.17□□□□□ -0.62
TSPAN4-208ENST00000409531 KLK12Q9UKR0 248 aa11.17□□□□□ -0.62
TSPAN4-208ENST00000409531 FRAS1Q86XX4 4008 aa11.16□□□□□ -0.62
TSPAN4-208ENST00000409531 IGIPA6NJ69 53 aa11.16□□□□□ -0.62
TSPAN4-208ENST00000409531 ZNF664Q8N3J9 261 aa11.16□□□□□ -0.62
TSPAN4-208ENST00000409531 TMEM141Q96I45 108 aa11.16□□□□□ -0.62
TSPAN4-208ENST00000409531 CDC42SE2Q9NRR3 84 aa11.16□□□□□ -0.62
TSPAN4-208ENST00000409531 IBA57-AS1B1ANH7 110 aa11.15□□□□□ -0.62
TSPAN4-208ENST00000409531 NUPR1O60356 82 aa11.15□□□□□ -0.62
TSPAN4-208ENST00000409531 CRPP02741 224 aa11.15□□□□□ -0.62
TSPAN4-208ENST00000409531 Q6ZN92 141 aa11.15□□□□□ -0.62
TSPAN4-208ENST00000409531 FAM19A2Q8N3H0 131 aa11.15□□□□□ -0.62
TSPAN4-208ENST00000409531 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.14□□□□□ -0.63
TSPAN4-208ENST00000409531 RTL8CO15255 209 aa11.14□□□□□ -0.63
TSPAN4-208ENST00000409531 ATP5LO75964 103 aa11.14□□□□□ -0.63
TSPAN4-208ENST00000409531 PDZD11Q5EBL8 140 aa11.14□□□□□ -0.63
TSPAN4-208ENST00000409531 C1orf134Q5TEV5 83 aa11.14□□□□□ -0.63
TSPAN4-208ENST00000409531 LINC00269Q8N2A0 174 aa11.14□□□□□ -0.63
TSPAN4-208ENST00000409531 IGLV4-3A0A075B6K6 122 aa11.13□□□□□ -0.63
TSPAN4-208ENST00000409531 TRAV8-3A0A0A6YYJ7 113 aa11.13□□□□□ -0.63
TSPAN4-208ENST00000409531 REG3AQ06141 175 aa11.13□□□□□ -0.63
TSPAN4-208ENST00000409531 Q6ZUT4 128 aa11.13□□□□□ -0.63
TSPAN4-208ENST00000409531 UBE2WQ96B02 151 aa11.13□□□□□ -0.63
TSPAN4-208ENST00000409531 PRR34Q9NV39 138 aa11.13□□□□□ -0.63
TSPAN4-208ENST00000409531 LEPROTL1O95214 131 aa11.12□□□□□ -0.63
TSPAN4-208ENST00000409531 TEX43Q6ZNM6 134 aa11.12□□□□□ -0.63
TSPAN4-208ENST00000409531 VCX2Q9H322 139 aa11.12□□□□□ -0.63
TSPAN4-208ENST00000409531 DNAH10Q8IVF4 4471 aa11.12□□□□□ -0.63
TSPAN4-208ENST00000409531 MIAQ16674 131 aa11.11□□□□□ -0.63
TSPAN4-208ENST00000409531 C2orf88Q9BSF0 95 aa11.11□□□□□ -0.63
TSPAN4-208ENST00000409531 HSPB8Q9UJY1 196 aa11.11□□□□□ -0.63
TSPAN4-208ENST00000409531 TRAV8-4A0A0B4J246 113 aa11.1□□□□□ -0.63
TSPAN4-208ENST00000409531 PRSS29PA6NIE9 313 aa11.1□□□□□ -0.63
TSPAN4-208ENST00000409531 CCL25O15444 150 aa11.1□□□□□ -0.63
TSPAN4-208ENST00000409531 CLPSL2Q6UWE3 100 aa11.1□□□□□ -0.63
TSPAN4-208ENST00000409531 ENHOQ6UWT2 76 aa11.1□□□□□ -0.63
TSPAN4-208ENST00000409531 IFI27L1Q96BM0 104 aa11.1□□□□□ -0.63
TSPAN4-208ENST00000409531 RMI2Q96E14 147 aa11.1□□□□□ -0.63
TSPAN4-208ENST00000409531 PACRGQ96M98 296 aaPredicted RBP11.1□□□□□ -0.63
TSPAN4-208ENST00000409531 OPRPNQ99935 248 aaPredicted RBP11.1□□□□□ -0.63
TSPAN4-208ENST00000409531 KRTAP1-5Q9BYS1 174 aa11.1□□□□□ -0.63
TSPAN4-208ENST00000409531 IGKV3OR2-268A0A0C4DH90 116 aa11.09□□□□□ -0.63
TSPAN4-208ENST00000409531 RNASE13Q5GAN3 156 aaKnown RBP11.09□□□□□ -0.63
TSPAN4-208ENST00000409531 NFE4Q86UQ8 179 aa11.09□□□□□ -0.63
TSPAN4-208ENST00000409531 C6orf223Q8N319 242 aa11.09□□□□□ -0.63
TSPAN4-208ENST00000409531 FAM104AQ969W3 186 aa11.09□□□□□ -0.63
TSPAN4-208ENST00000409531 AMELXQ99217 191 aa11.09□□□□□ -0.63
TSPAN4-208ENST00000409531 RYR1P21817 5038 aa11.09□□□□□ -0.63
TSPAN4-208ENST00000409531 IFITM10A6NMD0 228 aa11.09□□□□□ -0.63
TSPAN4-208ENST00000409531 FABP4P15090 132 aa11.09□□□□□ -0.63
TSPAN4-208ENST00000409531 S100A2P29034 98 aa11.09□□□□□ -0.63
TSPAN4-208ENST00000409531 SS18Q15532 418 aa11.09□□□□□ -0.63
TSPAN4-208ENST00000409531 C1orf43Q9BWL3 253 aa11.09□□□□□ -0.63
TSPAN4-208ENST00000409531 Q9HAA7 133 aa11.09□□□□□ -0.63
TSPAN4-208ENST00000409531 COX11Q9Y6N1 276 aa11.09□□□□□ -0.63
TSPAN4-208ENST00000409531 BAALCQ8WXS3 180 aa11.08□□□□□ -0.64
TSPAN4-208ENST00000409531 TRAV13-1A0A0B4J241 112 aa11.07□□□□□ -0.64
TSPAN4-208ENST00000409531 LINC00959A0A1B0GUT2 108 aa11.07□□□□□ -0.64
TSPAN4-208ENST00000409531 PRSS1P07477 247 aa11.07□□□□□ -0.64
TSPAN4-208ENST00000409531 SNRPEP62304 92 aaKnown RBP11.07□□□□□ -0.64
TSPAN4-208ENST00000409531 PMVKQ15126 192 aa11.07□□□□□ -0.64
TSPAN4-208ENST00000409531 HIST3H2BBQ8N257 126 aa11.07□□□□□ -0.64
TSPAN4-208ENST00000409531 TM2D2Q9BX73 214 aa11.07□□□□□ -0.64
TSPAN4-208ENST00000409531 DNAH2Q9P225 4427 aa11.06□□□□□ -0.64
TSPAN4-208ENST00000409531 C5orf52A6NGY3 159 aa11.06□□□□□ -0.64
TSPAN4-208ENST00000409531 LINC00173Q6ZV60 143 aa11.06□□□□□ -0.64
TSPAN4-208ENST00000409531 TMA7Q9Y2S6 64 aaKnown RBP11.06□□□□□ -0.64
TSPAN4-208ENST00000409531 IGKV2D-24A0A075B6R9 120 aa11.05□□□□□ -0.64
TSPAN4-208ENST00000409531 SEC11AP67812 179 aa11.05□□□□□ -0.64
TSPAN4-208ENST00000409531 MAP1LC3CQ9BXW4 147 aa11.05□□□□□ -0.64
TSPAN4-208ENST00000409531 CST9LQ9H4G1 147 aa11.05□□□□□ -0.64
TSPAN4-208ENST00000409531 IGLV10-54A0A075B6I4 117 aa11.04□□□□□ -0.64
TSPAN4-208ENST00000409531 A0A1B0GVY2 172 aa11.04□□□□□ -0.64
TSPAN4-208ENST00000409531 CHCHD10Q8WYQ3 142 aaPredicted RBP11.04□□□□□ -0.64
TSPAN4-208ENST00000409531 KIAA1109Q2LD37 5005 aa11.03□□□□□ -0.64
TSPAN4-208ENST00000409531 TRAV12-1A0A0B4J245 112 aa11.03□□□□□ -0.64
TSPAN4-208ENST00000409531 UBE2D1P51668 147 aa11.03□□□□□ -0.64
TSPAN4-208ENST00000409531 ZC2HC1BQ5TFG8 222 aa11.03□□□□□ -0.64
TSPAN4-208ENST00000409531 PSCAO43653 123 aa11.02□□□□□ -0.65
TSPAN4-208ENST00000409531 FAM19A3Q7Z5A8 133 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms