RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 SDIM1Q6ZPB5 146 aa4.03□□□□□ -1.76
CLK1-202ENST00000409403 SERP2Q8N6R1 65 aa4.03□□□□□ -1.76
CLK1-202ENST00000409403 MRPL53Q96EL3 112 aaKnown RBP4.03□□□□□ -1.76
CLK1-202ENST00000409403 C2orf48Q96LS8 159 aa4.03□□□□□ -1.76
CLK1-202ENST00000409403 DPH3P1Q9H4G8 78 aa4.03□□□□□ -1.76
CLK1-202ENST00000409403 DOCK10Q96BY6 2186 aa4.03□□□□□ -1.76
CLK1-202ENST00000409403 MED12Q93074 2177 aa4.03□□□□□ -1.76
CLK1-202ENST00000409403 TMEM223A0PJW6 202 aa4.03□□□□□ -1.76
CLK1-202ENST00000409403 E7EUB6 86 aa4.03□□□□□ -1.76
CLK1-202ENST00000409403 H7C2G1 150 aa4.03□□□□□ -1.76
CLK1-202ENST00000409403 IGKV1-17P01599 117 aa4.03□□□□□ -1.76
CLK1-202ENST00000409403 DUX4L9Q6RFH8 374 aaPredicted RBP4.03□□□□□ -1.76
CLK1-202ENST00000409403 Q6ZT83 130 aa4.03□□□□□ -1.76
CLK1-202ENST00000409403 SMIM29Q86T20 159 aa4.03□□□□□ -1.76
CLK1-202ENST00000409403 ZNF491Q8N8L2 437 aa4.03□□□□□ -1.76
CLK1-202ENST00000409403 KLHL30-AS1Q8NEE0 82 aa4.03□□□□□ -1.76
CLK1-202ENST00000409403 RNF5Q99942 180 aa4.03□□□□□ -1.76
CLK1-202ENST00000409403 JPT2Q9H910 190 aa4.03□□□□□ -1.76
CLK1-202ENST00000409403 TENM3Q9P273 2699 aa4.02□□□□□ -1.77
CLK1-202ENST00000409403 IGLV4-69A0A075B6H9 119 aa4.02□□□□□ -1.77
CLK1-202ENST00000409403 hADV29S1A0JD25 119 aa4.02□□□□□ -1.77
CLK1-202ENST00000409403 IGHV1-69P01742 117 aa4.02□□□□□ -1.77
CLK1-202ENST00000409403 IGHV1-2P23083 117 aa4.02□□□□□ -1.77
CLK1-202ENST00000409403 FAM222AQ5U5X8 452 aa4.02□□□□□ -1.77
CLK1-202ENST00000409403 MUSTN1Q8IVN3 82 aa4.02□□□□□ -1.77
CLK1-202ENST00000409403 GAFA1Q96PS6 74 aa4.02□□□□□ -1.77
CLK1-202ENST00000409403 TTTY12Q9BZ98 90 aa4.02□□□□□ -1.77
CLK1-202ENST00000409403 LENEPQ9Y5L5 61 aa4.02□□□□□ -1.77
CLK1-202ENST00000409403 PINLYPA6NC86 204 aa4.01□□□□□ -1.77
CLK1-202ENST00000409403 GAS8-AS1O95177 125 aa4.01□□□□□ -1.77
CLK1-202ENST00000409403 IGLV1-44P01699 117 aa4.01□□□□□ -1.77
CLK1-202ENST00000409403 TRGV3P03979 118 aa4.01□□□□□ -1.77
CLK1-202ENST00000409403 PSMB8P28062 276 aa4.01□□□□□ -1.77
CLK1-202ENST00000409403 ZNF80P51504 273 aaPredicted RBP4.01□□□□□ -1.77
CLK1-202ENST00000409403 NPC2P61916 151 aa4.01□□□□□ -1.77
CLK1-202ENST00000409403 ZNF876PQ49A33 203 aa4.01□□□□□ -1.77
CLK1-202ENST00000409403 MAPK1IP1LQ8NDC0 245 aa4.01□□□□□ -1.77
CLK1-202ENST00000409403 AMELXQ99217 191 aa4.01□□□□□ -1.77
CLK1-202ENST00000409403 OVOL2Q9BRP0 275 aa4.01□□□□□ -1.77
CLK1-202ENST00000409403 KLK5Q9Y337 293 aaPredicted RBP4.01□□□□□ -1.77
CLK1-202ENST00000409403 IGHV4-61A0A0C4DH41 118 aa4□□□□□ -1.77
CLK1-202ENST00000409403 IGHV7-4-1A0A0J9YVY3 117 aa4□□□□□ -1.77
CLK1-202ENST00000409403 A0A0J9YXY3 114 aa4□□□□□ -1.77
CLK1-202ENST00000409403 TINCRA0A1B0GVN0 87 aa4□□□□□ -1.77
CLK1-202ENST00000409403 J3QLI3 93 aa4□□□□□ -1.77
CLK1-202ENST00000409403 ENSAO43768 121 aaKnown RBP4□□□□□ -1.77
CLK1-202ENST00000409403 TIMM17BO60830 172 aa4□□□□□ -1.77
CLK1-202ENST00000409403 IGHV4-59P01825 116 aa4□□□□□ -1.77
CLK1-202ENST00000409403 SYNJ2BPP57105 145 aa4□□□□□ -1.77
CLK1-202ENST00000409403 MRPS36P82909 103 aaKnown RBP4□□□□□ -1.77
CLK1-202ENST00000409403 Q5XG85 94 aa4□□□□□ -1.77
CLK1-202ENST00000409403 Q6JHZ5 121 aa4□□□□□ -1.77
CLK1-202ENST00000409403 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
CLK1-202ENST00000409403 CEMP1Q6PRD7 247 aaPredicted RBP4□□□□□ -1.77
CLK1-202ENST00000409403 HRCT1Q6UXD1 115 aa4□□□□□ -1.77
CLK1-202ENST00000409403 Q8TAT8 98 aa4□□□□□ -1.77
CLK1-202ENST00000409403 DCANP1Q8TF63 244 aa4□□□□□ -1.77
CLK1-202ENST00000409403 TIMM21Q9BVV7 248 aa4□□□□□ -1.77
CLK1-202ENST00000409403 TP53TG1Q9Y2A0 90 aa4□□□□□ -1.77
CLK1-202ENST00000409403 PYGO1Q9Y3Y4 419 aa4□□□□□ -1.77
CLK1-202ENST00000409403 RAI1Q7Z5J4 1906 aaPredicted RBP4□□□□□ -1.77
CLK1-202ENST00000409403 IGHV3-21A0A0B4J1V1 117 aa4□□□□□ -1.77
CLK1-202ENST00000409403 TRAV26-2A0A0B4J265 109 aa4□□□□□ -1.77
CLK1-202ENST00000409403 IGIPA6NJ69 53 aa4□□□□□ -1.77
CLK1-202ENST00000409403 SMIM1B2RUZ4 78 aa4□□□□□ -1.77
CLK1-202ENST00000409403 K7EIM0 57 aa4□□□□□ -1.77
CLK1-202ENST00000409403 RS1O15537 224 aa4□□□□□ -1.77
CLK1-202ENST00000409403 LYZL6O75951 148 aa4□□□□□ -1.77
CLK1-202ENST00000409403 ZNF22P17026 224 aaPredicted RBP4□□□□□ -1.77
CLK1-202ENST00000409403 TSPEAR-AS2P59090 65 aa4□□□□□ -1.77
CLK1-202ENST00000409403 KRTAP10-11P60412 298 aa4□□□□□ -1.77
CLK1-202ENST00000409403 RHOHQ15669 191 aa4□□□□□ -1.77
CLK1-202ENST00000409403 MIAQ16674 131 aa4□□□□□ -1.77
CLK1-202ENST00000409403 S100A7L2Q5SY68 101 aa4□□□□□ -1.77
CLK1-202ENST00000409403 ATP5EP2Q5VTU8 51 aa4□□□□□ -1.77
CLK1-202ENST00000409403 IGFL3Q6UXB1 125 aa4□□□□□ -1.77
CLK1-202ENST00000409403 RNF182Q8N6D2 247 aa4□□□□□ -1.77
CLK1-202ENST00000409403 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4□□□□□ -1.77
CLK1-202ENST00000409403 SERP1Q9Y6X1 66 aa4□□□□□ -1.77
CLK1-202ENST00000409403 V9GYY9 64 aa4□□□□□ -1.77
CLK1-202ENST00000409403 CMYA5Q8N3K9 4069 aa3.99□□□□□ -1.77
CLK1-202ENST00000409403 TRAV12-2A0A075B6T6 113 aa3.99□□□□□ -1.77
CLK1-202ENST00000409403 A0A087WW49 117 aa3.99□□□□□ -1.77
CLK1-202ENST00000409403 TRAV8-3A0A0A6YYJ7 113 aa3.99□□□□□ -1.77
CLK1-202ENST00000409403 TRBV7-1A0A0A6YYK4 115 aa3.99□□□□□ -1.77
CLK1-202ENST00000409403 IGKV3D-20A0A0C4DH25 116 aa3.99□□□□□ -1.77
CLK1-202ENST00000409403 BCE1O60756 84 aa3.99□□□□□ -1.77
CLK1-202ENST00000409403 DNAL4O96015 105 aa3.99□□□□□ -1.77
CLK1-202ENST00000409403 PFN2P35080 140 aa3.99□□□□□ -1.77
CLK1-202ENST00000409403 UBE2E1P51965 193 aa3.99□□□□□ -1.77
CLK1-202ENST00000409403 C4orf26Q17RF5 130 aa3.99□□□□□ -1.77
CLK1-202ENST00000409403 MRGPRG-AS1Q2M3A8 158 aa3.99□□□□□ -1.77
CLK1-202ENST00000409403 TMEM61Q8N0U2 210 aa3.99□□□□□ -1.77
CLK1-202ENST00000409403 VSIG2Q96IQ7 327 aa3.99□□□□□ -1.77
CLK1-202ENST00000409403 C9orf85Q96MD7 179 aa3.99□□□□□ -1.77
CLK1-202ENST00000409403 CCL13Q99616 98 aa3.99□□□□□ -1.77
CLK1-202ENST00000409403 DSCAML1Q8TD84 2053 aa3.98□□□□□ -1.77
CLK1-202ENST00000409403 TNCP24821 2201 aa3.98□□□□□ -1.77
CLK1-202ENST00000409403 TRGV5A0A0B4J1U4 118 aa3.98□□□□□ -1.77
CLK1-202ENST00000409403 TRAV41A0A0B4J266 112 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms