RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 TM2D2Q9BX73 214 aa13.92□□□□□ -0.18
C4orf48-201ENST00000409248 CYSLTR1Q9Y271 337 aa13.92□□□□□ -0.18
C4orf48-201ENST00000409248 UBE2D4Q9Y2X8 147 aa13.92□□□□□ -0.18
C4orf48-201ENST00000409248 Q0VG73 95 aa13.91□□□□□ -0.18
C4orf48-201ENST00000409248 C2orf66Q6UXQ4 117 aa13.91□□□□□ -0.18
C4orf48-201ENST00000409248 SPATA12Q7Z6I5 190 aa13.91□□□□□ -0.18
C4orf48-201ENST00000409248 BAGE3Q86Y29 109 aa13.91□□□□□ -0.18
C4orf48-201ENST00000409248 TIMM21Q9BVV7 248 aa13.91□□□□□ -0.18
C4orf48-201ENST00000409248 SPANXA1Q9NS26 97 aa13.91□□□□□ -0.18
C4orf48-201ENST00000409248 UBE2WQ96B02 151 aa13.9□□□□□ -0.18
C4orf48-201ENST00000409248 RMI2Q96E14 147 aa13.9□□□□□ -0.18
C4orf48-201ENST00000409248 CSDC2Q9Y534 153 aaKnown RBP13.9□□□□□ -0.18
C4orf48-201ENST00000409248 C16orf90A8MZG2 172 aa13.89□□□□□ -0.19
C4orf48-201ENST00000409248 LINC00269Q8N2A0 174 aa13.89□□□□□ -0.19
C4orf48-201ENST00000409248 URB1-AS1Q96HZ7 61 aa13.89□□□□□ -0.19
C4orf48-201ENST00000409248 PKD1P98161 4303 aa13.89□□□□□ -0.19
C4orf48-201ENST00000409248 A0A087WTM6 91 aa13.88□□□□□ -0.19
C4orf48-201ENST00000409248 CHCHD1Q96BP2 118 aaKnown RBP13.88□□□□□ -0.19
C4orf48-201ENST00000409248 COX11Q9Y6N1 276 aa13.88□□□□□ -0.19
C4orf48-201ENST00000409248 PKHD1P08F94 4074 aa13.87□□□□□ -0.19
C4orf48-201ENST00000409248 LINC01549A6NIU2 74 aa13.87□□□□□ -0.19
C4orf48-201ENST00000409248 C1orf196B1AJZ1 125 aa13.87□□□□□ -0.19
C4orf48-201ENST00000409248 REG3AQ06141 175 aa13.87□□□□□ -0.19
C4orf48-201ENST00000409248 CLPSL2Q6UWE3 100 aa13.87□□□□□ -0.19
C4orf48-201ENST00000409248 PRR34Q9NV39 138 aa13.87□□□□□ -0.19
C4orf48-201ENST00000409248 ZNF664Q8N3J9 261 aa13.86□□□□□ -0.19
C4orf48-201ENST00000409248 TOMM6Q96B49 74 aa13.86□□□□□ -0.19
C4orf48-201ENST00000409248 CDC42SE2Q9NRR3 84 aa13.86□□□□□ -0.19
C4orf48-201ENST00000409248 PYGO1Q9Y3Y4 419 aa13.86□□□□□ -0.19
C4orf48-201ENST00000409248 HIST1H2BKO60814 126 aa13.85□□□□□ -0.19
C4orf48-201ENST00000409248 HIST1H2BJP06899 126 aa13.85□□□□□ -0.19
C4orf48-201ENST00000409248 HIST1H2BOP23527 126 aa13.85□□□□□ -0.19
C4orf48-201ENST00000409248 HIST1H2BBP33778 126 aa13.85□□□□□ -0.19
C4orf48-201ENST00000409248 HIST1H2BDP58876 126 aa13.85□□□□□ -0.19
C4orf48-201ENST00000409248 HIST1H2BCP62807 126 aa13.85□□□□□ -0.19
C4orf48-201ENST00000409248 MIAQ16674 131 aa13.85□□□□□ -0.19
C4orf48-201ENST00000409248 HIST2H2BEQ16778 126 aa13.85□□□□□ -0.19
C4orf48-201ENST00000409248 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.85□□□□□ -0.19
C4orf48-201ENST00000409248 ENHOQ6UWT2 76 aa13.85□□□□□ -0.19
C4orf48-201ENST00000409248 HIST1H2BHQ93079 126 aa13.85□□□□□ -0.19
C4orf48-201ENST00000409248 HIST1H2BNQ99877 126 aa13.85□□□□□ -0.19
C4orf48-201ENST00000409248 HIST1H2BMQ99879 126 aa13.85□□□□□ -0.19
C4orf48-201ENST00000409248 KRTAP10-2P60368 255 aa13.84□□□□□ -0.19
C4orf48-201ENST00000409248 MRPS36P82909 103 aaKnown RBP13.84□□□□□ -0.19
C4orf48-201ENST00000409248 CDPF1Q6NVV7 123 aa13.84□□□□□ -0.19
C4orf48-201ENST00000409248 Q6ZUT4 128 aa13.84□□□□□ -0.19
C4orf48-201ENST00000409248 IGKV3OR2-268A0A0C4DH90 116 aa13.83□□□□□ -0.2
C4orf48-201ENST00000409248 HSBP1O75506 76 aa13.83□□□□□ -0.2
C4orf48-201ENST00000409248 HBDP02042 147 aa13.83□□□□□ -0.2
C4orf48-201ENST00000409248 IGKV2D-24A0A075B6R9 120 aa13.82□□□□□ -0.2
C4orf48-201ENST00000409248 SERF1AO75920 110 aa13.82□□□□□ -0.2
C4orf48-201ENST00000409248 NPSP0C0P6 89 aa13.82□□□□□ -0.2
C4orf48-201ENST00000409248 SCGB3A1Q96QR1 104 aa13.82□□□□□ -0.2
C4orf48-201ENST00000409248 TIMM17AQ99595 171 aa13.82□□□□□ -0.2
C4orf48-201ENST00000409248 C1orf43Q9BWL3 253 aa13.82□□□□□ -0.2
C4orf48-201ENST00000409248 PGPEP1Q9NXJ5 209 aa13.82□□□□□ -0.2
C4orf48-201ENST00000409248 IGLV4-3A0A075B6K6 122 aa13.81□□□□□ -0.2
C4orf48-201ENST00000409248 TRAV8-4A0A0B4J246 113 aa13.81□□□□□ -0.2
C4orf48-201ENST00000409248 LRCOL1A6NCL2 159 aa13.81□□□□□ -0.2
C4orf48-201ENST00000409248 IGIPA6NJ69 53 aa13.81□□□□□ -0.2
C4orf48-201ENST00000409248 PMCHL1Q16048 86 aa13.81□□□□□ -0.2
C4orf48-201ENST00000409248 RNASE13Q5GAN3 156 aaKnown RBP13.81□□□□□ -0.2
C4orf48-201ENST00000409248 Q6ZN92 141 aa13.81□□□□□ -0.2
C4orf48-201ENST00000409248 TMEM141Q96I45 108 aa13.81□□□□□ -0.2
C4orf48-201ENST00000409248 OPRPNQ99935 248 aaPredicted RBP13.81□□□□□ -0.2
C4orf48-201ENST00000409248 PAPPA-AS1Q5QFB9 102 aa13.8□□□□□ -0.2
C4orf48-201ENST00000409248 ERASQ7Z444 233 aa13.8□□□□□ -0.2
C4orf48-201ENST00000409248 DNAH11Q96DT5 4516 aa13.8□□□□□ -0.2
C4orf48-201ENST00000409248 A0A096LNJ9 63 aa13.79□□□□□ -0.2
C4orf48-201ENST00000409248 LINC00310P59036 64 aa13.78□□□□□ -0.2
C4orf48-201ENST00000409248 TEX43Q6ZNM6 134 aa13.78□□□□□ -0.2
C4orf48-201ENST00000409248 FAM104AQ969W3 186 aa13.78□□□□□ -0.2
C4orf48-201ENST00000409248 IGLV10-54A0A075B6I4 117 aa13.77□□□□□ -0.21
C4orf48-201ENST00000409248 LINC00959A0A1B0GUT2 108 aa13.77□□□□□ -0.21
C4orf48-201ENST00000409248 IFITM10A6NMD0 228 aa13.77□□□□□ -0.21
C4orf48-201ENST00000409248 SS18Q15532 418 aa13.77□□□□□ -0.21
C4orf48-201ENST00000409248 NTN5Q8WTR8 489 aaPredicted RBP13.77□□□□□ -0.21
C4orf48-201ENST00000409248 C2orf88Q9BSF0 95 aa13.77□□□□□ -0.21
C4orf48-201ENST00000409248 VCX2Q9H322 139 aa13.77□□□□□ -0.21
C4orf48-201ENST00000409248 TRAV13-1A0A0B4J241 112 aa13.76□□□□□ -0.21
C4orf48-201ENST00000409248 PDZD11Q5EBL8 140 aa13.76□□□□□ -0.21
C4orf48-201ENST00000409248 Q8N814 137 aa13.76□□□□□ -0.21
C4orf48-201ENST00000409248 DYNC1H1Q14204 4646 aaKnown RBP13.75□□□□□ -0.21
C4orf48-201ENST00000409248 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.75□□□□□ -0.21
C4orf48-201ENST00000409248 CCL25O15444 150 aa13.75□□□□□ -0.21
C4orf48-201ENST00000409248 ATP5LO75964 103 aa13.75□□□□□ -0.21
C4orf48-201ENST00000409248 FAM19A2Q8N3H0 131 aa13.75□□□□□ -0.21
C4orf48-201ENST00000409248 CHCHD10Q8WYQ3 142 aaPredicted RBP13.75□□□□□ -0.21
C4orf48-201ENST00000409248 AMELXQ99217 191 aa13.74□□□□□ -0.21
C4orf48-201ENST00000409248 NUPR1O60356 82 aa13.73□□□□□ -0.21
C4orf48-201ENST00000409248 NDUFA6P56556 154 aa13.73□□□□□ -0.21
C4orf48-201ENST00000409248 MAPKAPK5-AS1Q8N8E1 139 aa13.73□□□□□ -0.21
C4orf48-201ENST00000409248 IGLV5-52A0A0A0MRZ9 124 aa13.72□□□□□ -0.21
C4orf48-201ENST00000409248 LECT2O14960 151 aa13.72□□□□□ -0.21
C4orf48-201ENST00000409248 COA6Q5JTJ3 125 aaKnown RBP13.72□□□□□ -0.21
C4orf48-201ENST00000409248 BAALCQ8WXS3 180 aa13.72□□□□□ -0.21
C4orf48-201ENST00000409248 GAGE12HA6NDE8 117 aa13.71□□□□□ -0.21
C4orf48-201ENST00000409248 CDK2AP2O75956 126 aa13.71□□□□□ -0.21
C4orf48-201ENST00000409248 FUSP35637 526 aaKnown RBP eCLIP13.71□□□□□ -0.21
C4orf48-201ENST00000409248 XCL1P47992 114 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms