RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 CHCHD10Q8WYQ3 142 aaPredicted RBP5.52□□□□□ -1.53
NUP43-204ENST00000403890 NUDT11Q96G61 164 aa5.52□□□□□ -1.53
NUP43-204ENST00000403890 BATF3Q9NR55 127 aa5.52□□□□□ -1.53
NUP43-204ENST00000403890 CYTL1Q9NRR1 136 aa5.52□□□□□ -1.53
NUP43-204ENST00000403890 LOC107984640A0A0U1RRK4 108 aa5.51□□□□□ -1.53
NUP43-204ENST00000403890 IFNA1P01562 189 aa5.51□□□□□ -1.53
NUP43-204ENST00000403890 RPL35P42766 123 aaKnown RBP5.51□□□□□ -1.53
NUP43-204ENST00000403890 C9orf116Q5BN46 136 aaPredicted RBP5.51□□□□□ -1.53
NUP43-204ENST00000403890 SUMO4Q6EEV6 95 aa5.51□□□□□ -1.53
NUP43-204ENST00000403890 SMIM15Q7Z3B0 74 aa5.51□□□□□ -1.53
NUP43-204ENST00000403890 LINC00526Q96FQ7 95 aa5.51□□□□□ -1.53
NUP43-204ENST00000403890 PGLYRP4Q96LB8 373 aa5.51□□□□□ -1.53
NUP43-204ENST00000403890 CDIP1Q9H305 208 aa5.51□□□□□ -1.53
NUP43-204ENST00000403890 NTF3P20783 257 aa5.5□□□□□ -1.53
NUP43-204ENST00000403890 SYCNQ0VAF6 134 aa5.5□□□□□ -1.53
NUP43-204ENST00000403890 RNASEKQ6P5S7 137 aaKnown RBP5.5□□□□□ -1.53
NUP43-204ENST00000403890 PHF5AQ7RTV0 110 aaKnown RBP5.5□□□□□ -1.53
NUP43-204ENST00000403890 MANBALQ9NQG1 85 aa5.5□□□□□ -1.53
NUP43-204ENST00000403890 CARHSP1Q9Y2V2 147 aaKnown RBP5.5□□□□□ -1.53
NUP43-204ENST00000403890 A0A087WZ39 114 aa5.49□□□□□ -1.53
NUP43-204ENST00000403890 IGHV1-58A0A0C4DH39 117 aa5.49□□□□□ -1.53
NUP43-204ENST00000403890 GNG4P50150 75 aa5.49□□□□□ -1.53
NUP43-204ENST00000403890 FOXI1Q12951 378 aa5.49□□□□□ -1.53
NUP43-204ENST00000403890 TWIST1Q15672 202 aa5.49□□□□□ -1.53
NUP43-204ENST00000403890 EIF5AL1Q6IS14 154 aaKnown RBP5.49□□□□□ -1.53
NUP43-204ENST00000403890 SMIM12Q96EX1 92 aa5.49□□□□□ -1.53
NUP43-204ENST00000403890 TMEM101Q96IK0 257 aa5.49□□□□□ -1.53
NUP43-204ENST00000403890 BTF3L4Q96K17 158 aa5.49□□□□□ -1.53
NUP43-204ENST00000403890 H7C423 109 aa5.48□□□□□ -1.53
NUP43-204ENST00000403890 ZNF561-AS1K7EIQ3 104 aa5.48□□□□□ -1.53
NUP43-204ENST00000403890 IGLC6P0CF74 106 aa5.48□□□□□ -1.53
NUP43-204ENST00000403890 FGF6P10767 208 aa5.48□□□□□ -1.53
NUP43-204ENST00000403890 CCL20P78556 96 aa5.48□□□□□ -1.53
NUP43-204ENST00000403890 ZNF345Q14585 488 aa5.48□□□□□ -1.53
NUP43-204ENST00000403890 TEX261Q6UWH6 196 aa5.48□□□□□ -1.53
NUP43-204ENST00000403890 LYZL1Q6UWQ5 148 aa5.48□□□□□ -1.53
NUP43-204ENST00000403890 MED9Q9NWA0 146 aa5.48□□□□□ -1.53
NUP43-204ENST00000403890 GNG13Q9P2W3 67 aa5.48□□□□□ -1.53
NUP43-204ENST00000403890 HMSDA8MTL9 139 aa5.47□□□□□ -1.53
NUP43-204ENST00000403890 PDE6DO43924 150 aa5.47□□□□□ -1.53
NUP43-204ENST00000403890 NCR2O95944 276 aa5.47□□□□□ -1.53
NUP43-204ENST00000403890 PMCHP20382 165 aa5.47□□□□□ -1.53
NUP43-204ENST00000403890 CENPWQ5EE01 88 aa5.47□□□□□ -1.53
NUP43-204ENST00000403890 C9orf62Q8N4C0 152 aa5.47□□□□□ -1.53
NUP43-204ENST00000403890 RAB19A4D1S5 217 aa5.46□□□□□ -1.54
NUP43-204ENST00000403890 APCSP02743 223 aa5.46□□□□□ -1.54
NUP43-204ENST00000403890 BCL2P10415 239 aa5.46□□□□□ -1.54
NUP43-204ENST00000403890 CAMPP49913 170 aa5.46□□□□□ -1.54
NUP43-204ENST00000403890 SS18Q15532 418 aa5.46□□□□□ -1.54
NUP43-204ENST00000403890 TPRXLQ17RH7 258 aa5.46□□□□□ -1.54
NUP43-204ENST00000403890 RGS21Q2M5E4 152 aa5.46□□□□□ -1.54
NUP43-204ENST00000403890 ISOC2Q96AB3 205 aa5.46□□□□□ -1.54
NUP43-204ENST00000403890 C19orf71A6NCJ1 209 aa5.45□□□□□ -1.54
NUP43-204ENST00000403890 BCL2L11O43521 198 aa5.45□□□□□ -1.54
NUP43-204ENST00000403890 APOMO95445 188 aa5.45□□□□□ -1.54
NUP43-204ENST00000403890 XCL1P47992 114 aa5.45□□□□□ -1.54
NUP43-204ENST00000403890 KRTAP11-1Q8IUC1 163 aa5.45□□□□□ -1.54
NUP43-204ENST00000403890 OR5A1Q8NGJ0 315 aa5.45□□□□□ -1.54
NUP43-204ENST00000403890 TSKUQ8WUA8 353 aa5.45□□□□□ -1.54
NUP43-204ENST00000403890 C11orf52Q96A22 123 aa5.45□□□□□ -1.54
NUP43-204ENST00000403890 FAM210AQ96ND0 272 aa5.45□□□□□ -1.54
NUP43-204ENST00000403890 IGLV4-69A0A075B6H9 119 aa5.44□□□□□ -1.54
NUP43-204ENST00000403890 SMLR1H3BR10 107 aa5.44□□□□□ -1.54
NUP43-204ENST00000403890 I3L3M4 83 aa5.44□□□□□ -1.54
NUP43-204ENST00000403890 CRYGAP11844 174 aa5.44□□□□□ -1.54
NUP43-204ENST00000403890 ZNF25P17030 456 aaPredicted RBP5.44□□□□□ -1.54
NUP43-204ENST00000403890 TAGLN2P37802 199 aaKnown RBP5.44□□□□□ -1.54
NUP43-204ENST00000403890 MEF2BQ02080 365 aaPredicted RBP5.44□□□□□ -1.54
NUP43-204ENST00000403890 SMAGPQ0VAQ4 97 aa5.44□□□□□ -1.54
NUP43-204ENST00000403890 GATD1Q8NB37 220 aa5.44□□□□□ -1.54
NUP43-204ENST00000403890 NUP35Q8NFH5 326 aa5.44□□□□□ -1.54
NUP43-204ENST00000403890 BORCS7Q96B45 105 aa5.44□□□□□ -1.54
NUP43-204ENST00000403890 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.43□□□□□ -1.54
NUP43-204ENST00000403890 IGKV2-29A2NJV5 120 aaPredicted RBP5.43□□□□□ -1.54
NUP43-204ENST00000403890 G3V3Q6 166 aa5.43□□□□□ -1.54
NUP43-204ENST00000403890 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.43□□□□□ -1.54
NUP43-204ENST00000403890 CCL25O15444 150 aa5.43□□□□□ -1.54
NUP43-204ENST00000403890 MALP21145 153 aa5.43□□□□□ -1.54
NUP43-204ENST00000403890 RPL18AQ02543 176 aaKnown RBP5.43□□□□□ -1.54
NUP43-204ENST00000403890 RPP21Q9H633 154 aaKnown RBP5.43□□□□□ -1.54
NUP43-204ENST00000403890 IGLV7-46A0A075B6I9 117 aa5.42□□□□□ -1.54
NUP43-204ENST00000403890 LINC00959A0A1B0GUT2 108 aa5.42□□□□□ -1.54
NUP43-204ENST00000403890 SDHAF1A6NFY7 115 aa5.42□□□□□ -1.54
NUP43-204ENST00000403890 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
NUP43-204ENST00000403890 RETNLBQ9BQ08 111 aa5.42□□□□□ -1.54
NUP43-204ENST00000403890 ST20Q9HBF5 79 aa5.42□□□□□ -1.54
NUP43-204ENST00000403890 A8MWL6 223 aa5.41□□□□□ -1.54
NUP43-204ENST00000403890 GATCO43716 136 aaKnown RBP5.41□□□□□ -1.54
NUP43-204ENST00000403890 CD164L2Q6UWJ8 174 aa5.41□□□□□ -1.54
NUP43-204ENST00000403890 Q6ZNX1 250 aa5.41□□□□□ -1.54
NUP43-204ENST00000403890 MRAP2Q96G30 205 aa5.41□□□□□ -1.54
NUP43-204ENST00000403890 CAMK2N2Q96S95 79 aa5.41□□□□□ -1.54
NUP43-204ENST00000403890 MUC17Q685J3 4493 aa5.41□□□□□ -1.54
NUP43-204ENST00000403890 CTRLP40313 264 aa5.4□□□□□ -1.54
NUP43-204ENST00000403890 OCC1Q8TAD7 63 aa5.4□□□□□ -1.54
NUP43-204ENST00000403890 TYMSOSQ8TAI1 123 aa5.4□□□□□ -1.54
NUP43-204ENST00000403890 RPL39LQ96EH5 51 aaKnown RBP5.4□□□□□ -1.54
NUP43-204ENST00000403890 OPRPNQ99935 248 aaPredicted RBP5.4□□□□□ -1.54
NUP43-204ENST00000403890 CNFNQ9BYD5 112 aa5.4□□□□□ -1.54
NUP43-204ENST00000403890 RNASE7Q9H1E1 156 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms