RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 OXLD1Q5BKU9 147 aa11.5□□□□□ -0.57
CHRFAM7A-203ENST00000401522 TMEM238C9JI98 176 aa11.5□□□□□ -0.57
CHRFAM7A-203ENST00000401522 MRPS36P82909 103 aaKnown RBP11.5□□□□□ -0.57
CHRFAM7A-203ENST00000401522 C1QTNF4Q9BXJ3 329 aa11.5□□□□□ -0.57
CHRFAM7A-203ENST00000401522 MAP6D1Q9H9H5 199 aa11.5□□□□□ -0.57
CHRFAM7A-203ENST00000401522 GAGE12HA6NDE8 117 aa11.49□□□□□ -0.57
CHRFAM7A-203ENST00000401522 SIGMAR1Q99720 223 aa11.49□□□□□ -0.57
CHRFAM7A-203ENST00000401522 SPXQ9BT56 116 aa11.49□□□□□ -0.57
CHRFAM7A-203ENST00000401522 SPANXA1Q9NS26 97 aa11.49□□□□□ -0.57
CHRFAM7A-203ENST00000401522 DNAJC30Q96LL9 226 aa11.48□□□□□ -0.57
CHRFAM7A-203ENST00000401522 SPATA25Q9BR10 227 aa11.48□□□□□ -0.57
CHRFAM7A-203ENST00000401522 INSP01308 110 aa11.48□□□□□ -0.57
CHRFAM7A-203ENST00000401522 SMCPP49901 116 aaPredicted RBP11.48□□□□□ -0.57
CHRFAM7A-203ENST00000401522 BEAN1Q3B7T3 259 aa11.48□□□□□ -0.57
CHRFAM7A-203ENST00000401522 FAM104AQ969W3 186 aa11.48□□□□□ -0.57
CHRFAM7A-203ENST00000401522 TIMM21Q9BVV7 248 aa11.48□□□□□ -0.57
CHRFAM7A-203ENST00000401522 IGHV3-64A0A075B6Q5 118 aa11.47□□□□□ -0.57
CHRFAM7A-203ENST00000401522 A0A0B4J2C4 111 aa11.47□□□□□ -0.57
CHRFAM7A-203ENST00000401522 A4D1N5 150 aa11.47□□□□□ -0.57
CHRFAM7A-203ENST00000401522 SCGB1A1P11684 91 aa11.47□□□□□ -0.57
CHRFAM7A-203ENST00000401522 EGFEM1PQ0D2K5 195 aa11.47□□□□□ -0.57
CHRFAM7A-203ENST00000401522 SFTA2Q6UW10 78 aa11.47□□□□□ -0.57
CHRFAM7A-203ENST00000401522 C11orf72Q8NBR9 251 aa11.47□□□□□ -0.57
CHRFAM7A-203ENST00000401522 CLUHP3Q96NS8 147 aa11.47□□□□□ -0.57
CHRFAM7A-203ENST00000401522 LINC01587Q99440 93 aa11.47□□□□□ -0.57
CHRFAM7A-203ENST00000401522 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.47□□□□□ -0.57
CHRFAM7A-203ENST00000401522 CHCHD7Q9BUK0 85 aa11.47□□□□□ -0.57
CHRFAM7A-203ENST00000401522 CMYA5Q8N3K9 4069 aa11.46□□□□□ -0.57
CHRFAM7A-203ENST00000401522 A0A0J9YXY3 114 aa11.46□□□□□ -0.58
CHRFAM7A-203ENST00000401522 TINCRA0A1B0GVN0 87 aa11.46□□□□□ -0.58
CHRFAM7A-203ENST00000401522 TCL1BO95988 128 aa11.46□□□□□ -0.58
CHRFAM7A-203ENST00000401522 IGHV3-53P01767 116 aa11.46□□□□□ -0.58
CHRFAM7A-203ENST00000401522 IGHV3-30-3P0DP02 117 aa11.46□□□□□ -0.58
CHRFAM7A-203ENST00000401522 Q6ZSN1 163 aa11.46□□□□□ -0.58
CHRFAM7A-203ENST00000401522 FOXI1Q12951 378 aa11.45□□□□□ -0.58
CHRFAM7A-203ENST00000401522 MUSTN1Q8IVN3 82 aa11.45□□□□□ -0.58
CHRFAM7A-203ENST00000401522 TMEM263Q8WUH6 116 aaKnown RBP11.45□□□□□ -0.58
CHRFAM7A-203ENST00000401522 UBE2D4Q9Y2X8 147 aa11.45□□□□□ -0.58
CHRFAM7A-203ENST00000401522 IGHV1-58A0A0C4DH39 117 aa11.45□□□□□ -0.58
CHRFAM7A-203ENST00000401522 RS1O15537 224 aa11.45□□□□□ -0.58
CHRFAM7A-203ENST00000401522 IGHV3-33P01772 117 aa11.45□□□□□ -0.58
CHRFAM7A-203ENST00000401522 PRM2P04554 102 aa11.45□□□□□ -0.58
CHRFAM7A-203ENST00000401522 SCGB1C2P0DMR2 95 aa11.45□□□□□ -0.58
CHRFAM7A-203ENST00000401522 AZU1P20160 251 aa11.45□□□□□ -0.58
CHRFAM7A-203ENST00000401522 CMC4P56277 68 aaPredicted RBP11.45□□□□□ -0.58
CHRFAM7A-203ENST00000401522 SBSPONQ8IVN8 264 aa11.45□□□□□ -0.58
CHRFAM7A-203ENST00000401522 FAM110AQ9BQ89 295 aa11.45□□□□□ -0.58
CHRFAM7A-203ENST00000401522 GTSF1LQ9H1H1 148 aa11.44□□□□□ -0.58
CHRFAM7A-203ENST00000401522 ERG28Q9UKR5 140 aa11.44□□□□□ -0.58
CHRFAM7A-203ENST00000401522 SORL1Q92673 2214 aa11.44□□□□□ -0.58
CHRFAM7A-203ENST00000401522 DNHD1Q96M86 4753 aa11.43□□□□□ -0.58
CHRFAM7A-203ENST00000401522 CEMP1Q6PRD7 247 aaPredicted RBP11.43□□□□□ -0.58
CHRFAM7A-203ENST00000401522 KRTAP10-11P60412 298 aa11.43□□□□□ -0.58
CHRFAM7A-203ENST00000401522 ODF3L2Q3SX64 289 aa11.43□□□□□ -0.58
CHRFAM7A-203ENST00000401522 EIF4EBP3O60516 100 aaPredicted RBP11.42□□□□□ -0.58
CHRFAM7A-203ENST00000401522 TEN1Q86WV5 123 aa11.42□□□□□ -0.58
CHRFAM7A-203ENST00000401522 PPDPFLQ8WWR9 84 aa11.42□□□□□ -0.58
CHRFAM7A-203ENST00000401522 VSIG2Q96IQ7 327 aa11.42□□□□□ -0.58
CHRFAM7A-203ENST00000401522 C19orf73Q9NVV2 129 aa11.42□□□□□ -0.58
CHRFAM7A-203ENST00000401522 Q9UF83 564 aa11.42□□□□□ -0.58
CHRFAM7A-203ENST00000401522 MGAM2Q2M2H8 2515 aa11.42□□□□□ -0.58
CHRFAM7A-203ENST00000401522 LITAFQ99732 161 aa11.41□□□□□ -0.58
CHRFAM7A-203ENST00000401522 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.41□□□□□ -0.58
CHRFAM7A-203ENST00000401522 IGKV2-29A2NJV5 120 aaPredicted RBP11.41□□□□□ -0.58
CHRFAM7A-203ENST00000401522 M0QXV9 152 aa11.41□□□□□ -0.58
CHRFAM7A-203ENST00000401522 KPRPQ5T749 579 aaPredicted RBP11.41□□□□□ -0.58
CHRFAM7A-203ENST00000401522 SPANXDQ9BXN6 97 aa11.41□□□□□ -0.58
CHRFAM7A-203ENST00000401522 SPANXCQ9NY87 97 aa11.41□□□□□ -0.58
CHRFAM7A-203ENST00000401522 NDUFA12Q9UI09 145 aa11.41□□□□□ -0.58
CHRFAM7A-203ENST00000401522 TRAV8-3A0A0A6YYJ7 113 aa11.4□□□□□ -0.58
CHRFAM7A-203ENST00000401522 RNASE13Q5GAN3 156 aaKnown RBP11.4□□□□□ -0.58
CHRFAM7A-203ENST00000401522 Q6ZUT4 128 aa11.4□□□□□ -0.58
CHRFAM7A-203ENST00000401522 GEMIN7Q9H840 131 aaKnown RBP11.39□□□□□ -0.59
CHRFAM7A-203ENST00000401522 SMAGPQ0VAQ4 97 aa11.39□□□□□ -0.59
CHRFAM7A-203ENST00000401522 TIRAPP58753 221 aa11.38□□□□□ -0.59
CHRFAM7A-203ENST00000401522 STHQ8IWL8 128 aa11.38□□□□□ -0.59
CHRFAM7A-203ENST00000401522 NACAE9PAV3 2078 aa11.38□□□□□ -0.59
CHRFAM7A-203ENST00000401522 IGHV3-38A0A0C4DH36 116 aa11.37□□□□□ -0.59
CHRFAM7A-203ENST00000401522 SPINK8P0C7L1 97 aa11.37□□□□□ -0.59
CHRFAM7A-203ENST00000401522 MIAQ16674 131 aa11.37□□□□□ -0.59
CHRFAM7A-203ENST00000401522 ZFAND6Q6FIF0 208 aa11.37□□□□□ -0.59
CHRFAM7A-203ENST00000401522 IL17DQ8TAD2 202 aa11.37□□□□□ -0.59
CHRFAM7A-203ENST00000401522 XCL2Q9UBD3 114 aa11.37□□□□□ -0.59
CHRFAM7A-203ENST00000401522 NBEAL1Q6ZS30 2694 aa11.37□□□□□ -0.59
CHRFAM7A-203ENST00000401522 IGLV5-45A0A087WSX0 123 aa11.37□□□□□ -0.59
CHRFAM7A-203ENST00000401522 TIMM17BO60830 172 aa11.37□□□□□ -0.59
CHRFAM7A-203ENST00000401522 Q1RN00 199 aa11.37□□□□□ -0.59
CHRFAM7A-203ENST00000401522 RNF183Q96D59 192 aa11.37□□□□□ -0.59
CHRFAM7A-203ENST00000401522 H7C2G1 150 aa11.36□□□□□ -0.59
CHRFAM7A-203ENST00000401522 CARD19Q96LW7 228 aa11.36□□□□□ -0.59
CHRFAM7A-203ENST00000401522 WFDC10AQ9H1F0 79 aa11.36□□□□□ -0.59
CHRFAM7A-203ENST00000401522 TRBV30A0A0K0K1B3 111 aa11.35□□□□□ -0.59
CHRFAM7A-203ENST00000401522 PRSS2P07478 247 aa11.35□□□□□ -0.59
CHRFAM7A-203ENST00000401522 ATXN8Q156A1 80 aa11.35□□□□□ -0.59
CHRFAM7A-203ENST00000401522 DGAT2L7PQ6IED9 249 aa11.35□□□□□ -0.59
CHRFAM7A-203ENST00000401522 C1orf158Q8N1D5 194 aa11.35□□□□□ -0.59
CHRFAM7A-203ENST00000401522 NOTCH1P46531 2555 aa11.35□□□□□ -0.59
CHRFAM7A-203ENST00000401522 SLC25A20O43772 301 aa11.35□□□□□ -0.59
CHRFAM7A-203ENST00000401522 ADAMTSL4-AS1Q5T5F5 129 aa11.35□□□□□ -0.59
CHRFAM7A-203ENST00000401522 ANKRD29Q8N6D5 301 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms