RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 PMVKQ15126 192 aa13.33□□□□□ -0.28
AC008060.1-201ENST00000401499 AMMECR1LQ6DCA0 310 aa13.33□□□□□ -0.28
AC008060.1-201ENST00000401499 AMELXQ99217 191 aa13.33□□□□□ -0.28
AC008060.1-201ENST00000401499 CST9LQ9H4G1 147 aa13.33□□□□□ -0.28
AC008060.1-201ENST00000401499 IGLV4-60A0A075B6I1 120 aa13.32□□□□□ -0.28
AC008060.1-201ENST00000401499 C20orf202A1L168 122 aa13.32□□□□□ -0.28
AC008060.1-201ENST00000401499 MPV17L2Q567V2 206 aa13.32□□□□□ -0.28
AC008060.1-201ENST00000401499 DGAT2L7PQ6IED9 249 aa13.32□□□□□ -0.28
AC008060.1-201ENST00000401499 ATOH7Q8N100 152 aa13.32□□□□□ -0.28
AC008060.1-201ENST00000401499 MRPL35Q9NZE8 188 aaKnown RBP13.32□□□□□ -0.28
AC008060.1-201ENST00000401499 TGP01266 2768 aa13.32□□□□□ -0.28
AC008060.1-201ENST00000401499 ZNF25P17030 456 aaPredicted RBP13.32□□□□□ -0.28
AC008060.1-201ENST00000401499 LINC00518Q8N0U6 118 aa13.32□□□□□ -0.28
AC008060.1-201ENST00000401499 Q8N3U1 123 aa13.32□□□□□ -0.28
AC008060.1-201ENST00000401499 OR5A1Q8NGJ0 315 aa13.32□□□□□ -0.28
AC008060.1-201ENST00000401499 VCX2Q9H322 139 aa13.32□□□□□ -0.28
AC008060.1-201ENST00000401499 CDC42SE2Q9NRR3 84 aa13.32□□□□□ -0.28
AC008060.1-201ENST00000401499 SMAGPQ0VAQ4 97 aa13.31□□□□□ -0.28
AC008060.1-201ENST00000401499 CHTOPQ9Y3Y2 248 aaKnown RBP13.31□□□□□ -0.28
AC008060.1-201ENST00000401499 TMEM262E9PQX1 116 aa13.3□□□□□ -0.28
AC008060.1-201ENST00000401499 RBX1P62877 108 aa13.3□□□□□ -0.28
AC008060.1-201ENST00000401499 PAPPA-AS1Q5QFB9 102 aa13.3□□□□□ -0.28
AC008060.1-201ENST00000401499 TEX43Q6ZNM6 134 aa13.3□□□□□ -0.28
AC008060.1-201ENST00000401499 ZNF664Q8N3J9 261 aa13.3□□□□□ -0.28
AC008060.1-201ENST00000401499 TMEM101Q96IK0 257 aa13.3□□□□□ -0.28
AC008060.1-201ENST00000401499 C12orf57Q99622 126 aa13.3□□□□□ -0.28
AC008060.1-201ENST00000401499 STARD9Q9P2P6 4700 aa13.29□□□□□ -0.28
AC008060.1-201ENST00000401499 F8VRH5 84 aa13.29□□□□□ -0.28
AC008060.1-201ENST00000401499 IGLV4-69A0A075B6H9 119 aa13.28□□□□□ -0.28
AC008060.1-201ENST00000401499 A0A1B0GUV1 79 aa13.28□□□□□ -0.28
AC008060.1-201ENST00000401499 WFDC10BQ8IUB3 73 aa13.28□□□□□ -0.28
AC008060.1-201ENST00000401499 APLNQ9ULZ1 77 aa13.28□□□□□ -0.28
AC008060.1-201ENST00000401499 TRAV8-6A0A0B4J262 113 aa13.27□□□□□ -0.29
AC008060.1-201ENST00000401499 PLECQ15149 4684 aaKnown RBP13.27□□□□□ -0.29
AC008060.1-201ENST00000401499 NUPR2A6NF83 97 aa13.26□□□□□ -0.29
AC008060.1-201ENST00000401499 DPM2O94777 84 aa13.26□□□□□ -0.29
AC008060.1-201ENST00000401499 MAJINQ3KP22 176 aa13.26□□□□□ -0.29
AC008060.1-201ENST00000401499 LINC00588Q9Y4M8 146 aa13.26□□□□□ -0.29
AC008060.1-201ENST00000401499 IGKCP01834 107 aa13.25□□□□□ -0.29
AC008060.1-201ENST00000401499 A0A0J9YXV3 536 aa13.24□□□□□ -0.29
AC008060.1-201ENST00000401499 UBE2D1P51668 147 aa13.24□□□□□ -0.29
AC008060.1-201ENST00000401499 C2orf88Q9BSF0 95 aa13.24□□□□□ -0.29
AC008060.1-201ENST00000401499 LYSTQ99698 3801 aa13.24□□□□□ -0.29
AC008060.1-201ENST00000401499 hDV102S1A0JD36 115 aa13.24□□□□□ -0.29
AC008060.1-201ENST00000401499 C11orf86A6NJI1 115 aa13.24□□□□□ -0.29
AC008060.1-201ENST00000401499 PKIAP61925 76 aa13.24□□□□□ -0.29
AC008060.1-201ENST00000401499 IGLC3P0DOY3 106 aa13.23□□□□□ -0.29
AC008060.1-201ENST00000401499 PLNP26678 52 aa13.23□□□□□ -0.29
AC008060.1-201ENST00000401499 MRPS16Q9Y3D3 137 aaKnown RBP13.23□□□□□ -0.29
AC008060.1-201ENST00000401499 NFE4Q86UQ8 179 aa13.22□□□□□ -0.29
AC008060.1-201ENST00000401499 KLK5Q9Y337 293 aaPredicted RBP13.22□□□□□ -0.29
AC008060.1-201ENST00000401499 TRAV9-2A0A087WT02 112 aa13.21□□□□□ -0.29
AC008060.1-201ENST00000401499 TRAV13-1A0A0B4J241 112 aa13.21□□□□□ -0.29
AC008060.1-201ENST00000401499 CCL18P55774 89 aa13.21□□□□□ -0.29
AC008060.1-201ENST00000401499 CHAC1Q9BUX1 264 aa13.21□□□□□ -0.29
AC008060.1-201ENST00000401499 VAMP8Q9BV40 100 aa13.21□□□□□ -0.29
AC008060.1-201ENST00000401499 IGKV3OR2-268A0A0C4DH90 116 aa13.2□□□□□ -0.3
AC008060.1-201ENST00000401499 IGHV3-30P01768 117 aa13.2□□□□□ -0.3
AC008060.1-201ENST00000401499 IGHV3-33P01772 117 aa13.2□□□□□ -0.3
AC008060.1-201ENST00000401499 ANGP03950 147 aaKnown RBP13.2□□□□□ -0.3
AC008060.1-201ENST00000401499 IGHV3-30-3P0DP02 117 aa13.2□□□□□ -0.3
AC008060.1-201ENST00000401499 IGHV3-30-5P0DP03 117 aa13.2□□□□□ -0.3
AC008060.1-201ENST00000401499 ZFAND6Q6FIF0 208 aa13.2□□□□□ -0.3
AC008060.1-201ENST00000401499 CLPSL2Q6UWE3 100 aa13.2□□□□□ -0.3
AC008060.1-201ENST00000401499 FAM19A3Q7Z5A8 133 aa13.2□□□□□ -0.3
AC008060.1-201ENST00000401499 PAM16Q9Y3D7 125 aa13.2□□□□□ -0.3
AC008060.1-201ENST00000401499 TENM2Q9NT68 2774 aa13.2□□□□□ -0.3
AC008060.1-201ENST00000401499 LINC00242Q5T6M2 205 aa13.2□□□□□ -0.3
AC008060.1-201ENST00000401499 LINC00269Q8N2A0 174 aa13.2□□□□□ -0.3
AC008060.1-201ENST00000401499 STPG4Q8N801 248 aa13.2□□□□□ -0.3
AC008060.1-201ENST00000401499 TINCRA0A1B0GVN0 87 aa13.19□□□□□ -0.3
AC008060.1-201ENST00000401499 S100A12P80511 92 aa13.19□□□□□ -0.3
AC008060.1-201ENST00000401499 COX6A2Q02221 97 aa13.18□□□□□ -0.3
AC008060.1-201ENST00000401499 LINC01556Q5JQF7 62 aa13.18□□□□□ -0.3
AC008060.1-201ENST00000401499 UPK3BQ9BT76 320 aa13.18□□□□□ -0.3
AC008060.1-201ENST00000401499 LINC00959A0A1B0GUT2 108 aa13.17□□□□□ -0.3
AC008060.1-201ENST00000401499 ZNF22P17026 224 aaPredicted RBP13.17□□□□□ -0.3
AC008060.1-201ENST00000401499 SPATA45Q537H7 98 aa13.17□□□□□ -0.3
AC008060.1-201ENST00000401499 ANKRD39Q53RE8 183 aa13.17□□□□□ -0.3
AC008060.1-201ENST00000401499 MUC7Q8TAX7 377 aa13.17□□□□□ -0.3
AC008060.1-201ENST00000401499 KLK12Q9UKR0 248 aa13.17□□□□□ -0.3
AC008060.1-201ENST00000401499 DNAH10OSP0CZ25 163 aa13.16□□□□□ -0.3
AC008060.1-201ENST00000401499 TCTAP57738 103 aa13.16□□□□□ -0.3
AC008060.1-201ENST00000401499 REG3AQ06141 175 aa13.16□□□□□ -0.3
AC008060.1-201ENST00000401499 TMEM170BQ5T4T1 132 aa13.15□□□□□ -0.3
AC008060.1-201ENST00000401499 PRR34Q9NV39 138 aa13.15□□□□□ -0.3
AC008060.1-201ENST00000401499 IGLV5-45A0A087WSX0 123 aa13.15□□□□□ -0.3
AC008060.1-201ENST00000401499 SIVA1O15304 175 aa13.15□□□□□ -0.3
AC008060.1-201ENST00000401499 WWC2-AS2Q96NR7 200 aa13.15□□□□□ -0.3
AC008060.1-201ENST00000401499 HSBP1L1C9JCN9 74 aa13.14□□□□□ -0.31
AC008060.1-201ENST00000401499 ENHOQ6UWT2 76 aa13.14□□□□□ -0.31
AC008060.1-201ENST00000401499 GEMIN7Q9H840 131 aaKnown RBP13.14□□□□□ -0.31
AC008060.1-201ENST00000401499 DNAH1Q9P2D7 4330 aa13.14□□□□□ -0.31
AC008060.1-201ENST00000401499 HERVK_113P63121 156 aa13.13□□□□□ -0.31
AC008060.1-201ENST00000401499 CDKN2A-AS1Q9UH64 79 aa13.13□□□□□ -0.31
AC008060.1-201ENST00000401499 IGKV2D-26A0A0A0MRZ7 120 aa13.12□□□□□ -0.31
AC008060.1-201ENST00000401499 SEC11AP67812 179 aa13.12□□□□□ -0.31
AC008060.1-201ENST00000401499 LINC00469Q8N7U9 141 aa13.12□□□□□ -0.31
AC008060.1-201ENST00000401499 TMEM223A0PJW6 202 aa13.11□□□□□ -0.31
AC008060.1-201ENST00000401499 PRO1933Q9H354 126 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms