RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 WFDC11Q8NEX6 87 aa9.22□□□□□ -0.93
PPP4R1-202ENST00000400555 APCP25054 2843 aa9.21□□□□□ -0.93
PPP4R1-202ENST00000400555 TEX49A0A1B0GTD5 131 aa9.21□□□□□ -0.93
PPP4R1-202ENST00000400555 J3QLI3 93 aa9.21□□□□□ -0.93
PPP4R1-202ENST00000400555 CIRBPQ14011 172 aaKnown RBP9.21□□□□□ -0.93
PPP4R1-202ENST00000400555 CARD19Q96LW7 228 aa9.21□□□□□ -0.93
PPP4R1-202ENST00000400555 DEFB114Q30KQ6 69 aa9.21□□□□□ -0.94
PPP4R1-202ENST00000400555 YAE1D1Q9NRH1 226 aa9.21□□□□□ -0.94
PPP4R1-202ENST00000400555 DEFB130BP0DP73 79 aa9.21□□□□□ -0.94
PPP4R1-202ENST00000400555 DEFB130AP0DP74 79 aa9.21□□□□□ -0.94
PPP4R1-202ENST00000400555 XGP55808 180 aa9.21□□□□□ -0.94
PPP4R1-202ENST00000400555 TRIAP1O43715 76 aa9.2□□□□□ -0.94
PPP4R1-202ENST00000400555 RPL32P62910 135 aaKnown RBP9.2□□□□□ -0.94
PPP4R1-202ENST00000400555 RPL36AP83881 106 aaKnown RBP9.2□□□□□ -0.94
PPP4R1-202ENST00000400555 ATXN8Q156A1 80 aa9.2□□□□□ -0.94
PPP4R1-202ENST00000400555 POM121L12Q8N7R1 296 aa9.2□□□□□ -0.94
PPP4R1-202ENST00000400555 RPL36ALQ969Q0 106 aaKnown RBP9.2□□□□□ -0.94
PPP4R1-202ENST00000400555 A0A096LPF7 62 aa9.2□□□□□ -0.94
PPP4R1-202ENST00000400555 IGHV1-58A0A0C4DH39 117 aa9.2□□□□□ -0.94
PPP4R1-202ENST00000400555 UBE2D3P61077 147 aa9.2□□□□□ -0.94
PPP4R1-202ENST00000400555 UBE2D2P62837 147 aa9.2□□□□□ -0.94
PPP4R1-202ENST00000400555 ODF3Q96PU9 254 aa9.2□□□□□ -0.94
PPP4R1-202ENST00000400555 GAGE6Q13070 117 aa9.2□□□□□ -0.94
PPP4R1-202ENST00000400555 DEFB113Q30KQ7 82 aa9.2□□□□□ -0.94
PPP4R1-202ENST00000400555 LINC00694P0DN24 101 aa9.19□□□□□ -0.94
PPP4R1-202ENST00000400555 LINC01620Q4KN68 170 aa9.19□□□□□ -0.94
PPP4R1-202ENST00000400555 AMELXQ99217 191 aa9.19□□□□□ -0.94
PPP4R1-202ENST00000400555 CITED2Q99967 270 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-202ENST00000400555 TRGV4A0A0C4DH28 118 aa9.19□□□□□ -0.94
PPP4R1-202ENST00000400555 CCL24O00175 119 aa9.19□□□□□ -0.94
PPP4R1-202ENST00000400555 EIF4EBP3O60516 100 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-202ENST00000400555 SETXQ7Z333 2677 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-202ENST00000400555 TMEM262E9PQX1 116 aa9.19□□□□□ -0.94
PPP4R1-202ENST00000400555 COX6A2Q02221 97 aa9.19□□□□□ -0.94
PPP4R1-202ENST00000400555 TMEM263Q8WUH6 116 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-202ENST00000400555 LOC100131303A0A0U1RQF7 123 aa9.18□□□□□ -0.94
PPP4R1-202ENST00000400555 TMEM89A2RUT3 159 aa9.18□□□□□ -0.94
PPP4R1-202ENST00000400555 BRI3O95415 125 aa9.18□□□□□ -0.94
PPP4R1-202ENST00000400555 CHCHD5Q9BSY4 110 aa9.18□□□□□ -0.94
PPP4R1-202ENST00000400555 VSIG2Q96IQ7 327 aa9.18□□□□□ -0.94
PPP4R1-202ENST00000400555 UBE2D4Q9Y2X8 147 aa9.18□□□□□ -0.94
PPP4R1-202ENST00000400555 SNCGO76070 127 aa9.18□□□□□ -0.94
PPP4R1-202ENST00000400555 CHCHD7Q9BUK0 85 aa9.17□□□□□ -0.94
PPP4R1-202ENST00000400555 FHL3Q13643 280 aa9.17□□□□□ -0.94
PPP4R1-202ENST00000400555 CLPSL2Q6UWE3 100 aa9.17□□□□□ -0.94
PPP4R1-202ENST00000400555 ICOSQ9Y6W8 199 aa9.17□□□□□ -0.94
PPP4R1-202ENST00000400555 ODF3L2Q3SX64 289 aa9.17□□□□□ -0.94
PPP4R1-202ENST00000400555 TEX29Q8N6K0 151 aa9.16□□□□□ -0.94
PPP4R1-202ENST00000400555 ATRQ13535 2644 aa9.16□□□□□ -0.94
PPP4R1-202ENST00000400555 TRAV8-4A0A0B4J246 113 aa9.16□□□□□ -0.94
PPP4R1-202ENST00000400555 TMEM101Q96IK0 257 aa9.16□□□□□ -0.94
PPP4R1-202ENST00000400555 SPATA25Q9BR10 227 aa9.16□□□□□ -0.94
PPP4R1-202ENST00000400555 ANAPC13Q9BS18 74 aa9.16□□□□□ -0.94
PPP4R1-202ENST00000400555 CDIP1Q9H305 208 aa9.16□□□□□ -0.94
PPP4R1-202ENST00000400555 SPANXA1Q9NS26 97 aa9.16□□□□□ -0.94
PPP4R1-202ENST00000400555 PFN2P35080 140 aa9.15□□□□□ -0.94
PPP4R1-202ENST00000400555 TTC32Q5I0X7 151 aa9.15□□□□□ -0.94
PPP4R1-202ENST00000400555 OR13C6PQ8NH95 151 aa9.15□□□□□ -0.94
PPP4R1-202ENST00000400555 ESM1Q9NQ30 184 aa9.15□□□□□ -0.94
PPP4R1-202ENST00000400555 DNAJC9-AS1A6NH13 148 aa9.15□□□□□ -0.95
PPP4R1-202ENST00000400555 MRPS36P82909 103 aaKnown RBP9.15□□□□□ -0.95
PPP4R1-202ENST00000400555 LINC00158P58513 81 aa9.14□□□□□ -0.95
PPP4R1-202ENST00000400555 PIK3CD-AS1Q5SR53 167 aa9.14□□□□□ -0.95
PPP4R1-202ENST00000400555 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.14□□□□□ -0.95
PPP4R1-202ENST00000400555 C4orf3Q8WVX3 66 aa9.14□□□□□ -0.95
PPP4R1-202ENST00000400555 CRYBA4P53673 196 aa9.14□□□□□ -0.95
PPP4R1-202ENST00000400555 TRAV26-1A0A087WT03 109 aa9.14□□□□□ -0.95
PPP4R1-202ENST00000400555 ZFAND6Q6FIF0 208 aa9.14□□□□□ -0.95
PPP4R1-202ENST00000400555 C5orf38Q86SI9 138 aa9.14□□□□□ -0.95
PPP4R1-202ENST00000400555 GAGE2BQ13066 116 aa9.13□□□□□ -0.95
PPP4R1-202ENST00000400555 GAGE2EQ4V326 116 aa9.13□□□□□ -0.95
PPP4R1-202ENST00000400555 C1orf158Q8N1D5 194 aa9.13□□□□□ -0.95
PPP4R1-202ENST00000400555 UBE2WQ96B02 151 aa9.13□□□□□ -0.95
PPP4R1-202ENST00000400555 GAGE2DQ9UEU5 116 aa9.13□□□□□ -0.95
PPP4R1-202ENST00000400555 CRLF1O75462 422 aa9.13□□□□□ -0.95
PPP4R1-202ENST00000400555 MIAQ16674 131 aa9.13□□□□□ -0.95
PPP4R1-202ENST00000400555 TINCRA0A1B0GVN0 87 aa9.13□□□□□ -0.95
PPP4R1-202ENST00000400555 A0A0B4J2C4 111 aa9.12□□□□□ -0.95
PPP4R1-202ENST00000400555 DEFB4AO15263 64 aa9.12□□□□□ -0.95
PPP4R1-202ENST00000400555 UBR5O95071 2799 aaPredicted RBP9.12□□□□□ -0.95
PPP4R1-202ENST00000400555 PYGO1Q9Y3Y4 419 aa9.12□□□□□ -0.95
PPP4R1-202ENST00000400555 ZNF843Q8N446 348 aa9.11□□□□□ -0.95
PPP4R1-202ENST00000400555 C11orf72Q8NBR9 251 aa9.11□□□□□ -0.95
PPP4R1-202ENST00000400555 K7EQD1 137 aa9.11□□□□□ -0.95
PPP4R1-202ENST00000400555 C15orf53Q8NAA6 179 aa9.11□□□□□ -0.95
PPP4R1-202ENST00000400555 FLNBO75369 2602 aaKnown RBP9.11□□□□□ -0.95
PPP4R1-202ENST00000400555 RNF183Q96D59 192 aa9.11□□□□□ -0.95
PPP4R1-202ENST00000400555 A0A096LNT2 108 aa9.1□□□□□ -0.95
PPP4R1-202ENST00000400555 LINC00242Q5T6M2 205 aa9.1□□□□□ -0.95
PPP4R1-202ENST00000400555 TMEM243Q9BU79 118 aa9.1□□□□□ -0.95
PPP4R1-202ENST00000400555 RS1O15537 224 aa9.1□□□□□ -0.95
PPP4R1-202ENST00000400555 ATP6V0E2Q8NHE4 81 aa9.1□□□□□ -0.95
PPP4R1-202ENST00000400555 RNASE1P07998 156 aaKnown RBP9.1□□□□□ -0.95
PPP4R1-202ENST00000400555 HTN3P15516 51 aa9.1□□□□□ -0.95
PPP4R1-202ENST00000400555 HERVK_113P63121 156 aa9.1□□□□□ -0.95
PPP4R1-202ENST00000400555 TRAV4A0A0B4J268 109 aa9.09□□□□□ -0.95
PPP4R1-202ENST00000400555 FAM104AQ969W3 186 aa9.09□□□□□ -0.95
PPP4R1-202ENST00000400555 PF4P02776 101 aa9.09□□□□□ -0.95
PPP4R1-202ENST00000400555 C3orf56Q8N813 242 aa9.09□□□□□ -0.95
PPP4R1-202ENST00000400555 Q9HAA7 133 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms