RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 LGALS3P17931 250 aaKnown RBP4.84□□□□□ -1.63
CSNK2A1-204ENST00000400227 CRYBA4P53673 196 aa4.84□□□□□ -1.63
CSNK2A1-204ENST00000400227 RPL24P83731 157 aaKnown RBP4.84□□□□□ -1.63
CSNK2A1-204ENST00000400227 ZNF415Q09FC8 603 aa4.84□□□□□ -1.63
CSNK2A1-204ENST00000400227 DEFB114Q30KQ6 69 aa4.84□□□□□ -1.63
CSNK2A1-204ENST00000400227 TMEM61Q8N0U2 210 aa4.84□□□□□ -1.63
CSNK2A1-204ENST00000400227 ZNF843Q8N446 348 aa4.84□□□□□ -1.63
CSNK2A1-204ENST00000400227 DUX3Q96PT4 197 aa4.84□□□□□ -1.63
CSNK2A1-204ENST00000400227 UBR5O95071 2799 aaPredicted RBP4.84□□□□□ -1.64
CSNK2A1-204ENST00000400227 IGHV3-73A0A0B4J1V6 119 aa4.83□□□□□ -1.64
CSNK2A1-204ENST00000400227 CFC1BP0CG36 223 aa4.83□□□□□ -1.64
CSNK2A1-204ENST00000400227 CFC1P0CG37 223 aa4.83□□□□□ -1.64
CSNK2A1-204ENST00000400227 UBE2D3P61077 147 aa4.83□□□□□ -1.64
CSNK2A1-204ENST00000400227 UBE2D2P62837 147 aa4.83□□□□□ -1.64
CSNK2A1-204ENST00000400227 COTL1Q14019 142 aa4.83□□□□□ -1.64
CSNK2A1-204ENST00000400227 SMIM29Q86T20 159 aa4.83□□□□□ -1.64
CSNK2A1-204ENST00000400227 NDUFA11Q86Y39 141 aa4.83□□□□□ -1.64
CSNK2A1-204ENST00000400227 TMEM86BQ8N661 226 aa4.83□□□□□ -1.64
CSNK2A1-204ENST00000400227 C11orf72Q8NBR9 251 aa4.83□□□□□ -1.64
CSNK2A1-204ENST00000400227 CHCHD7Q9BUK0 85 aa4.83□□□□□ -1.64
CSNK2A1-204ENST00000400227 VCX2Q9H322 139 aa4.83□□□□□ -1.64
CSNK2A1-204ENST00000400227 MRPL16Q9NX20 251 aaKnown RBP4.83□□□□□ -1.64
CSNK2A1-204ENST00000400227 MYO18BQ8IUG5 2567 aa4.83□□□□□ -1.64
CSNK2A1-204ENST00000400227 A8MZ25 164 aa4.82□□□□□ -1.64
CSNK2A1-204ENST00000400227 RS1O15537 224 aa4.82□□□□□ -1.64
CSNK2A1-204ENST00000400227 APOMO95445 188 aa4.82□□□□□ -1.64
CSNK2A1-204ENST00000400227 CD28P10747 220 aa4.82□□□□□ -1.64
CSNK2A1-204ENST00000400227 CFAP126Q5VTH2 177 aa4.82□□□□□ -1.64
CSNK2A1-204ENST00000400227 SH2D6Q7Z4S9 175 aa4.82□□□□□ -1.64
CSNK2A1-204ENST00000400227 SPXQ9BT56 116 aa4.82□□□□□ -1.64
CSNK2A1-204ENST00000400227 Q9UF83 564 aa4.82□□□□□ -1.64
CSNK2A1-204ENST00000400227 TEX15Q9BXT5 2789 aa4.82□□□□□ -1.64
CSNK2A1-204ENST00000400227 POLQO75417 2590 aa4.82□□□□□ -1.64
CSNK2A1-204ENST00000400227 INSP01308 110 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 IGHV3-53P01767 116 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 HTN1P15515 57 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 MRPS36P82909 103 aaKnown RBP4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 ETDBQ3ZM63 59 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 Q6ZTC4 211 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 C10orf126Q8N4M7 172 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 DYNLRB2Q8TF09 96 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 DNAJC30Q96LL9 226 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 LINC01587Q99440 93 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 GCN1Q92616 2671 aaKnown RBP4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 A0A087WYN8 130 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 TRAV25A0A0B4J276 109 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 A0A0J9YXY3 114 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 PSMB2P49721 201 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 CEMP1Q6PRD7 247 aaPredicted RBP4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 SBSPONQ8IVN8 264 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 MTURNQ8N3F0 131 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 ATP6V0E2Q8NHE4 81 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 TMEM263Q8WUH6 116 aaKnown RBP4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 SPANXA1Q9NS26 97 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 UBE2D4Q9Y2X8 147 aa4.81□□□□□ -1.64
CSNK2A1-204ENST00000400227 ANK3Q12955 4377 aaKnown RBP4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 ZNF462Q96JM2 2506 aa4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 SETXQ7Z333 2677 aaKnown RBP4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 IGHV3-64A0A075B6Q5 118 aa4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 A0A0B4J2C4 111 aa4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 LOC107984156A0A0G2JMH3 177 aa4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 TINCRA0A1B0GVN0 87 aa4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 A4D1N5 150 aa4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 IGHV3-33P01772 117 aa4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 IGHV3-30-3P0DP02 117 aa4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 LYRM7Q5U5X0 104 aa4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 MUSTN1Q8IVN3 82 aa4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 ARL17AQ8IVW1 177 aa4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 C1orf158Q8N1D5 194 aa4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 LITAFQ99732 161 aa4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 PRO1854Q9UHT4 67 aa4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 TSSC4Q9Y5U2 329 aaPredicted RBP4.8□□□□□ -1.64
CSNK2A1-204ENST00000400227 FASNP49327 2511 aaKnown RBP4.79□□□□□ -1.64
CSNK2A1-204ENST00000400227 HELZ2Q9BYK8 2649 aaKnown RBP4.79□□□□□ -1.64
CSNK2A1-204ENST00000400227 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.79□□□□□ -1.64
CSNK2A1-204ENST00000400227 IGHV1-58A0A0C4DH39 117 aa4.79□□□□□ -1.64
CSNK2A1-204ENST00000400227 IGKV2-29A2NJV5 120 aaPredicted RBP4.79□□□□□ -1.64
CSNK2A1-204ENST00000400227 TMEM238C9JI98 176 aa4.79□□□□□ -1.64
CSNK2A1-204ENST00000400227 J3QR89 54 aa4.79□□□□□ -1.64
CSNK2A1-204ENST00000400227 TCL1BO95988 128 aa4.79□□□□□ -1.64
CSNK2A1-204ENST00000400227 AZU1P20160 251 aa4.79□□□□□ -1.64
CSNK2A1-204ENST00000400227 MT3P25713 68 aa4.79□□□□□ -1.64
CSNK2A1-204ENST00000400227 INSL3P51460 131 aa4.79□□□□□ -1.64
CSNK2A1-204ENST00000400227 SFTA2Q6UW10 78 aa4.79□□□□□ -1.64
CSNK2A1-204ENST00000400227 Q6ZUT4 128 aa4.79□□□□□ -1.64
CSNK2A1-204ENST00000400227 VSIG2Q96IQ7 327 aa4.79□□□□□ -1.64
CSNK2A1-204ENST00000400227 TIMM21Q9BVV7 248 aa4.79□□□□□ -1.64
CSNK2A1-204ENST00000400227 PTPN13Q12923 2485 aa4.79□□□□□ -1.64
CSNK2A1-204ENST00000400227 TRBV20-1A0A075B6N2 111 aa4.78□□□□□ -1.64
CSNK2A1-204ENST00000400227 TRAV8-3A0A0A6YYJ7 113 aa4.78□□□□□ -1.64
CSNK2A1-204ENST00000400227 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.78□□□□□ -1.64
CSNK2A1-204ENST00000400227 IGHV3-38A0A0C4DH36 116 aa4.78□□□□□ -1.64
CSNK2A1-204ENST00000400227 RNASE13Q5GAN3 156 aaKnown RBP4.78□□□□□ -1.64
CSNK2A1-204ENST00000400227 Q75L30 129 aa4.78□□□□□ -1.64
CSNK2A1-204ENST00000400227 TEX29Q8N6K0 151 aa4.78□□□□□ -1.64
CSNK2A1-204ENST00000400227 SPANXDQ9BXN6 97 aa4.78□□□□□ -1.64
CSNK2A1-204ENST00000400227 ESM1Q9NQ30 184 aa4.78□□□□□ -1.64
CSNK2A1-204ENST00000400227 SPANXCQ9NY87 97 aa4.78□□□□□ -1.64
CSNK2A1-204ENST00000400227 XCL2Q9UBD3 114 aa4.78□□□□□ -1.64
CSNK2A1-204ENST00000400227 CSMD2Q7Z408 3487 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms