RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 TTTY13Q9BZ97 58 aa8.27□□□□□ -1.09
SKA3-203ENST00000400018 PRSS29PA6NIE9 313 aa8.26□□□□□ -1.09
SKA3-203ENST00000400018 DKK2Q9UBU2 259 aa8.26□□□□□ -1.09
SKA3-203ENST00000400018 FOXI1Q12951 378 aa8.26□□□□□ -1.09
SKA3-203ENST00000400018 TRGV4A0A0C4DH28 118 aa8.25□□□□□ -1.09
SKA3-203ENST00000400018 NHLRC4P0CG21 123 aaPredicted RBP8.25□□□□□ -1.09
SKA3-203ENST00000400018 MED14OSP0DP75 135 aa8.25□□□□□ -1.09
SKA3-203ENST00000400018 Q6ZTC4 211 aa8.25□□□□□ -1.09
SKA3-203ENST00000400018 ZNRF2Q8NHG8 242 aa8.25□□□□□ -1.09
SKA3-203ENST00000400018 PRO0461Q9UI25 63 aa8.25□□□□□ -1.09
SKA3-203ENST00000400018 E9PLD3 99 aa8.25□□□□□ -1.09
SKA3-203ENST00000400018 RPL39P62891 51 aaKnown RBP8.25□□□□□ -1.09
SKA3-203ENST00000400018 CEMP1Q6PRD7 247 aaPredicted RBP8.25□□□□□ -1.09
SKA3-203ENST00000400018 U3KQK5 164 aa8.25□□□□□ -1.09
SKA3-203ENST00000400018 SDHAF1A6NFY7 115 aa8.24□□□□□ -1.09
SKA3-203ENST00000400018 IGLL5B9A064 214 aa8.24□□□□□ -1.09
SKA3-203ENST00000400018 CCDC179H3BU77 68 aa8.24□□□□□ -1.09
SKA3-203ENST00000400018 AP5S1Q9NUS5 200 aa8.24□□□□□ -1.09
SKA3-203ENST00000400018 A0A096LNJ9 63 aa8.24□□□□□ -1.09
SKA3-203ENST00000400018 RS1O15537 224 aa8.24□□□□□ -1.09
SKA3-203ENST00000400018 DAZ2Q13117 558 aaKnown RBP8.24□□□□□ -1.09
SKA3-203ENST00000400018 RNASE13Q5GAN3 156 aaKnown RBP8.24□□□□□ -1.09
SKA3-203ENST00000400018 NFE4Q86UQ8 179 aa8.24□□□□□ -1.09
SKA3-203ENST00000400018 NEXN-AS1Q8NBZ9 246 aa8.24□□□□□ -1.09
SKA3-203ENST00000400018 OPRPNQ99935 248 aaPredicted RBP8.24□□□□□ -1.09
SKA3-203ENST00000400018 SPXQ9BT56 116 aa8.24□□□□□ -1.09
SKA3-203ENST00000400018 F5H768 121 aa8.23□□□□□ -1.09
SKA3-203ENST00000400018 DAD1P61803 113 aa8.23□□□□□ -1.09
SKA3-203ENST00000400018 FHL2Q14192 279 aa8.23□□□□□ -1.09
SKA3-203ENST00000400018 TRBV20-1A0A075B6N2 111 aa8.23□□□□□ -1.09
SKA3-203ENST00000400018 SUMO2P61956 95 aaKnown RBP8.23□□□□□ -1.09
SKA3-203ENST00000400018 C12orf74Q32Q52 190 aa8.23□□□□□ -1.09
SKA3-203ENST00000400018 LINC00467Q9BRT7 94 aa8.23□□□□□ -1.09
SKA3-203ENST00000400018 A8MWV9 139 aa8.23□□□□□ -1.09
SKA3-203ENST00000400018 KPRPQ5T749 579 aaPredicted RBP8.23□□□□□ -1.09
SKA3-203ENST00000400018 STARD9Q9P2P6 4700 aa8.22□□□□□ -1.09
SKA3-203ENST00000400018 IGLV2-18A0A075B6J9 118 aa8.22□□□□□ -1.09
SKA3-203ENST00000400018 ZFAND6Q6FIF0 208 aa8.22□□□□□ -1.09
SKA3-203ENST00000400018 Q8N3U1 123 aa8.22□□□□□ -1.09
SKA3-203ENST00000400018 MAP1LC3AQ9H492 121 aa8.22□□□□□ -1.09
SKA3-203ENST00000400018 KIR2DL4Q99706 377 aa8.22□□□□□ -1.09
SKA3-203ENST00000400018 PPDPFQ9H3Y8 114 aa8.22□□□□□ -1.09
SKA3-203ENST00000400018 CHAC1Q9BUX1 264 aa8.21□□□□□ -1.09
SKA3-203ENST00000400018 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.21□□□□□ -1.1
SKA3-203ENST00000400018 IGKV2D-26A0A0A0MRZ7 120 aa8.21□□□□□ -1.1
SKA3-203ENST00000400018 IGKV2-29A2NJV5 120 aaPredicted RBP8.21□□□□□ -1.1
SKA3-203ENST00000400018 M0QXV9 152 aa8.21□□□□□ -1.1
SKA3-203ENST00000400018 PTH2Q96A98 100 aa8.21□□□□□ -1.1
SKA3-203ENST00000400018 HHLA3Q9XRX5 114 aa8.21□□□□□ -1.1
SKA3-203ENST00000400018 TRAV4A0A0B4J268 109 aa8.2□□□□□ -1.1
SKA3-203ENST00000400018 MIFP14174 115 aa8.2□□□□□ -1.1
SKA3-203ENST00000400018 SMIM2Q9BVW6 85 aa8.2□□□□□ -1.1
SKA3-203ENST00000400018 A0A087WX48 190 aa8.2□□□□□ -1.1
SKA3-203ENST00000400018 PLECQ15149 4684 aaKnown RBP8.19□□□□□ -1.1
SKA3-203ENST00000400018 A8MZ25 164 aa8.19□□□□□ -1.1
SKA3-203ENST00000400018 GYPEP15421 78 aa8.19□□□□□ -1.1
SKA3-203ENST00000400018 SMCPP49901 116 aaPredicted RBP8.19□□□□□ -1.1
SKA3-203ENST00000400018 LGALS9BQ3B8N2 356 aa8.19□□□□□ -1.1
SKA3-203ENST00000400018 LGALS9CQ6DKI2 356 aa8.19□□□□□ -1.1
SKA3-203ENST00000400018 VSIG2Q96IQ7 327 aa8.19□□□□□ -1.1
SKA3-203ENST00000400018 CEND1Q8N111 149 aa8.19□□□□□ -1.1
SKA3-203ENST00000400018 K7EQD1 137 aa8.18□□□□□ -1.1
SKA3-203ENST00000400018 SPART-AS1P0CW21 52 aa8.18□□□□□ -1.1
SKA3-203ENST00000400018 TM2D3Q9BRN9 247 aa8.18□□□□□ -1.1
SKA3-203ENST00000400018 POLR2KP53803 58 aaKnown RBP8.18□□□□□ -1.1
SKA3-203ENST00000400018 NTM-AS1Q6ZSK4 140 aa8.18□□□□□ -1.1
SKA3-203ENST00000400018 TRBV25-1A0A075B6N4 114 aa8.17□□□□□ -1.1
SKA3-203ENST00000400018 SMIM9A6NGZ8 99 aa8.17□□□□□ -1.1
SKA3-203ENST00000400018 TSHBP01222 138 aa8.17□□□□□ -1.1
SKA3-203ENST00000400018 LINC00694P0DN24 101 aa8.17□□□□□ -1.1
SKA3-203ENST00000400018 CARD19Q96LW7 228 aa8.17□□□□□ -1.1
SKA3-203ENST00000400018 NDUFV3P56181 108 aaKnown RBP8.16□□□□□ -1.1
SKA3-203ENST00000400018 SFTA2Q6UW10 78 aa8.16□□□□□ -1.1
SKA3-203ENST00000400018 Q8N8P6 123 aa8.16□□□□□ -1.1
SKA3-203ENST00000400018 C11orf45Q8TAV5 145 aa8.16□□□□□ -1.1
SKA3-203ENST00000400018 ZFP2Q6ZN57 461 aa8.16□□□□□ -1.1
SKA3-203ENST00000400018 PAX4O43316 350 aa8.16□□□□□ -1.1
SKA3-203ENST00000400018 FCER1GP30273 86 aa8.16□□□□□ -1.1
SKA3-203ENST00000400018 DNAJC30Q96LL9 226 aa8.16□□□□□ -1.1
SKA3-203ENST00000400018 TP53TG1Q9Y2A0 90 aa8.16□□□□□ -1.1
SKA3-203ENST00000400018 LINC00612Q8N6U2 182 aa8.15□□□□□ -1.1
SKA3-203ENST00000400018 HIGD1BQ9P298 99 aa8.15□□□□□ -1.1
SKA3-203ENST00000400018 TRBV7-3A0A075B6L6 115 aa8.15□□□□□ -1.11
SKA3-203ENST00000400018 IGKV3OR2-268A0A0C4DH90 116 aa8.15□□□□□ -1.11
SKA3-203ENST00000400018 LAGE3Q14657 143 aa8.15□□□□□ -1.11
SKA3-203ENST00000400018 ATP6V0E2Q8NHE4 81 aa8.15□□□□□ -1.11
SKA3-203ENST00000400018 LYRM9A8MSI8 78 aa8.14□□□□□ -1.11
SKA3-203ENST00000400018 RHODO00212 210 aa8.14□□□□□ -1.11
SKA3-203ENST00000400018 ATP5G1P05496 136 aa8.14□□□□□ -1.11
SKA3-203ENST00000400018 C2orf66Q6UXQ4 117 aa8.14□□□□□ -1.11
SKA3-203ENST00000400018 IFI27L1Q96BM0 104 aa8.14□□□□□ -1.11
SKA3-203ENST00000400018 CLPSL2Q6UWE3 100 aa8.14□□□□□ -1.11
SKA3-203ENST00000400018 GAGE2BQ13066 116 aa8.13□□□□□ -1.11
SKA3-203ENST00000400018 GAGE2EQ4V326 116 aa8.13□□□□□ -1.11
SKA3-203ENST00000400018 ZMAT4Q9H898 229 aa8.13□□□□□ -1.11
SKA3-203ENST00000400018 GAGE2DQ9UEU5 116 aa8.13□□□□□ -1.11
SKA3-203ENST00000400018 DEFB131BA0A096LNP1 70 aa8.13□□□□□ -1.11
SKA3-203ENST00000400018 NXT2Q9NPJ8 142 aaKnown RBP8.13□□□□□ -1.11
SKA3-203ENST00000400018 TRBV27A0A0K0K1C4 114 aa8.12□□□□□ -1.11
SKA3-203ENST00000400018 I3L3M4 83 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms