RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 LENEPQ9Y5L5 61 aa8.34□□□□□ -1.08
CACNA1C-217ENST00000399641 C1orf134Q5TEV5 83 aa8.33□□□□□ -1.08
CACNA1C-217ENST00000399641 MSMPQ1L6U9 139 aa8.33□□□□□ -1.08
CACNA1C-217ENST00000399641 TP73-AS1Q9UF72 201 aa8.33□□□□□ -1.08
CACNA1C-217ENST00000399641 SYCNQ0VAF6 134 aa8.32□□□□□ -1.08
CACNA1C-217ENST00000399641 LINC00308Q8TCZ7 52 aa8.32□□□□□ -1.08
CACNA1C-217ENST00000399641 PLXND1Q9Y4D7 1925 aa8.32□□□□□ -1.08
CACNA1C-217ENST00000399641 PROK1P58294 105 aa8.32□□□□□ -1.08
CACNA1C-217ENST00000399641 Q8N7P7 452 aa8.32□□□□□ -1.08
CACNA1C-217ENST00000399641 KIF26BQ2KJY2 2108 aa8.32□□□□□ -1.08
CACNA1C-217ENST00000399641 H0Y9P7 68 aa8.32□□□□□ -1.08
CACNA1C-217ENST00000399641 TSC2P49815 1807 aa8.32□□□□□ -1.08
CACNA1C-217ENST00000399641 LINC01556Q5JQF7 62 aa8.31□□□□□ -1.08
CACNA1C-217ENST00000399641 NDUFC1O43677 76 aa8.31□□□□□ -1.08
CACNA1C-217ENST00000399641 TRIAP1O43715 76 aa8.31□□□□□ -1.08
CACNA1C-217ENST00000399641 CLUHP3Q96NS8 147 aa8.31□□□□□ -1.08
CACNA1C-217ENST00000399641 C1orf137Q5JT78 98 aa8.31□□□□□ -1.08
CACNA1C-217ENST00000399641 LINC01006Q8NI28 216 aa8.31□□□□□ -1.08
CACNA1C-217ENST00000399641 TRBV30A0A0K0K1B3 111 aa8.3□□□□□ -1.08
CACNA1C-217ENST00000399641 A0A1W2PNU3 283 aaPredicted RBP8.3□□□□□ -1.08
CACNA1C-217ENST00000399641 FREM3P0C091 2139 aa8.3□□□□□ -1.08
CACNA1C-217ENST00000399641 IGLV11-55A0A075B6I3 123 aa8.3□□□□□ -1.08
CACNA1C-217ENST00000399641 KPRPQ5T749 579 aaPredicted RBP8.3□□□□□ -1.08
CACNA1C-217ENST00000399641 PKDREJQ9NTG1 2253 aa8.29□□□□□ -1.08
CACNA1C-217ENST00000399641 A0A1B0GU69 56 aa8.29□□□□□ -1.08
CACNA1C-217ENST00000399641 LST1O00453 97 aa8.29□□□□□ -1.08
CACNA1C-217ENST00000399641 LMO4P61968 165 aa8.29□□□□□ -1.08
CACNA1C-217ENST00000399641 FHL2Q14192 279 aa8.29□□□□□ -1.08
CACNA1C-217ENST00000399641 DEFB114Q30KQ6 69 aa8.29□□□□□ -1.08
CACNA1C-217ENST00000399641 LINC00474Q9P2X8 69 aa8.29□□□□□ -1.08
CACNA1C-217ENST00000399641 RBX1P62877 108 aa8.28□□□□□ -1.08
CACNA1C-217ENST00000399641 APLNQ9ULZ1 77 aa8.28□□□□□ -1.08
CACNA1C-217ENST00000399641 LOC107984640A0A0U1RRK4 108 aa8.28□□□□□ -1.08
CACNA1C-217ENST00000399641 HCG22E2RYF7 251 aa8.28□□□□□ -1.08
CACNA1C-217ENST00000399641 NHLRC4P0CG21 123 aaPredicted RBP8.28□□□□□ -1.08
CACNA1C-217ENST00000399641 TRBV7-7A0A0K0K1E9 115 aa8.28□□□□□ -1.08
CACNA1C-217ENST00000399641 BBC3Q96PG8 261 aaPredicted RBP8.28□□□□□ -1.08
CACNA1C-217ENST00000399641 DHRS4-AS1Q9P1J3 65 aa8.28□□□□□ -1.08
CACNA1C-217ENST00000399641 MED12Q93074 2177 aa8.28□□□□□ -1.08
CACNA1C-217ENST00000399641 A0A1B0GXF2 115 aa8.28□□□□□ -1.08
CACNA1C-217ENST00000399641 C10orf99Q6UWK7 81 aa8.28□□□□□ -1.08
CACNA1C-217ENST00000399641 DENND4AQ7Z401 1863 aa8.27□□□□□ -1.09
CACNA1C-217ENST00000399641 ADAMTS9Q9P2N4 1935 aa8.27□□□□□ -1.09
CACNA1C-217ENST00000399641 PYGO1Q9Y3Y4 419 aa8.27□□□□□ -1.09
CACNA1C-217ENST00000399641 XGP55808 180 aa8.27□□□□□ -1.09
CACNA1C-217ENST00000399641 ATP5EP2Q5VTU8 51 aa8.27□□□□□ -1.09
CACNA1C-217ENST00000399641 UNQ9165/PRO28630Q6UXU0 137 aa8.27□□□□□ -1.09
CACNA1C-217ENST00000399641 C1orf147Q96MC9 270 aaPredicted RBP8.27□□□□□ -1.09
CACNA1C-217ENST00000399641 FAM208BQ5VWN6 2430 aa8.27□□□□□ -1.09
CACNA1C-217ENST00000399641 PLXNA4Q9HCM2 1894 aa8.26□□□□□ -1.09
CACNA1C-217ENST00000399641 CDKN2A-AS1Q9UH64 79 aa8.26□□□□□ -1.09
CACNA1C-217ENST00000399641 PHF3Q92576 2039 aaKnown RBP8.26□□□□□ -1.09
CACNA1C-217ENST00000399641 NCKAP5O14513 1909 aa8.26□□□□□ -1.09
CACNA1C-217ENST00000399641 A0A087WVE0 104 aa8.26□□□□□ -1.09
CACNA1C-217ENST00000399641 OTOGLQ3ZCN5 2332 aa8.26□□□□□ -1.09
CACNA1C-217ENST00000399641 SMIM26A0A096LP01 95 aa8.26□□□□□ -1.09
CACNA1C-217ENST00000399641 FAM229AH3BQW9 127 aa8.26□□□□□ -1.09
CACNA1C-217ENST00000399641 TANC1Q9C0D5 1861 aa8.26□□□□□ -1.09
CACNA1C-217ENST00000399641 ZNF407Q9C0G0 2248 aa8.25□□□□□ -1.09
CACNA1C-217ENST00000399641 PLCE1Q9P212 2302 aa8.25□□□□□ -1.09
CACNA1C-217ENST00000399641 SMIM11BQ8TCY0 68 aa8.25□□□□□ -1.09
CACNA1C-217ENST00000399641 NBASA2RRP1 2371 aa8.25□□□□□ -1.09
CACNA1C-217ENST00000399641 TMEM254Q8TBM7 123 aa8.25□□□□□ -1.09
CACNA1C-217ENST00000399641 I3L2K1 104 aa8.25□□□□□ -1.09
CACNA1C-217ENST00000399641 M0R378 163 aa8.24□□□□□ -1.09
CACNA1C-217ENST00000399641 ZFHX2Q9C0A1 2572 aaPredicted RBP8.24□□□□□ -1.09
CACNA1C-217ENST00000399641 K7EIM0 57 aa8.24□□□□□ -1.09
CACNA1C-217ENST00000399641 FRMD6-AS1P0C7T7 363 aa8.24□□□□□ -1.09
CACNA1C-217ENST00000399641 GPR179Q6PRD1 2367 aa8.24□□□□□ -1.09
CACNA1C-217ENST00000399641 A0A0J9YX75 114 aa8.24□□□□□ -1.09
CACNA1C-217ENST00000399641 REG3GQ6UW15 175 aa8.24□□□□□ -1.09
CACNA1C-217ENST00000399641 ROS1P08922 2347 aa8.23□□□□□ -1.09
CACNA1C-217ENST00000399641 NEXN-AS1Q8NBZ9 246 aa8.23□□□□□ -1.09
CACNA1C-217ENST00000399641 C20orf203Q8NBC4 194 aa8.23□□□□□ -1.09
CACNA1C-217ENST00000399641 PRM2P04554 102 aa8.23□□□□□ -1.09
CACNA1C-217ENST00000399641 COX7CP15954 63 aa8.23□□□□□ -1.09
CACNA1C-217ENST00000399641 NLRC5Q86WI3 1866 aa8.23□□□□□ -1.09
CACNA1C-217ENST00000399641 SPTAN1Q13813 2472 aaKnown RBP8.22□□□□□ -1.09
CACNA1C-217ENST00000399641 Q6ZSR3 168 aa8.22□□□□□ -1.09
CACNA1C-217ENST00000399641 RPL28P46779 137 aaKnown RBP8.22□□□□□ -1.09
CACNA1C-217ENST00000399641 SPACA4Q8TDM5 124 aa8.22□□□□□ -1.09
CACNA1C-217ENST00000399641 Q9BRP9 147 aa8.21□□□□□ -1.09
CACNA1C-217ENST00000399641 TMEM131Q92545 1883 aa8.21□□□□□ -1.09
CACNA1C-217ENST00000399641 ODF3BA8MYP8 253 aa8.21□□□□□ -1.09
CACNA1C-217ENST00000399641 IGLV3-1P01715 115 aa8.21□□□□□ -1.1
CACNA1C-217ENST00000399641 HIGD1BQ9P298 99 aa8.21□□□□□ -1.1
CACNA1C-217ENST00000399641 VWA8A3KMH1 1905 aa8.21□□□□□ -1.1
CACNA1C-217ENST00000399641 hDV103S1A0JD37 113 aa8.21□□□□□ -1.1
CACNA1C-217ENST00000399641 C9orf116Q5BN46 136 aaPredicted RBP8.21□□□□□ -1.1
CACNA1C-217ENST00000399641 IGLV4-69A0A075B6H9 119 aa8.2□□□□□ -1.1
CACNA1C-217ENST00000399641 BRI3O95415 125 aa8.2□□□□□ -1.1
CACNA1C-217ENST00000399641 KRTAP10-9P60411 292 aa8.2□□□□□ -1.1
CACNA1C-217ENST00000399641 MBD6Q96DN6 1003 aa8.2□□□□□ -1.1
CACNA1C-217ENST00000399641 C2orf48Q96LS8 159 aa8.2□□□□□ -1.1
CACNA1C-217ENST00000399641 PRR3P79522 188 aaKnown RBP8.2□□□□□ -1.1
CACNA1C-217ENST00000399641 C6orf223Q8N319 242 aa8.2□□□□□ -1.1
CACNA1C-217ENST00000399641 SPRY4Q9C004 299 aa8.2□□□□□ -1.1
CACNA1C-217ENST00000399641 ZNF702PQ9H963 129 aa8.2□□□□□ -1.1
CACNA1C-217ENST00000399641 NOTCH3Q9UM47 2321 aa8.19□□□□□ -1.1
CACNA1C-217ENST00000399641 PCNX2A6NKB5 2137 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms