RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 ESDP10768 282 aa10.69□□□□□ -0.7
UFD1-202ENST00000399523 MBD3L1Q8WWY6 194 aa10.69□□□□□ -0.7
UFD1-202ENST00000399523 OPRPNQ99935 248 aaPredicted RBP10.69□□□□□ -0.7
UFD1-202ENST00000399523 ALG5Q9Y673 324 aa10.69□□□□□ -0.7
UFD1-202ENST00000399523 IFNA1P01562 189 aa10.68□□□□□ -0.7
UFD1-202ENST00000399523 SFT2D1Q8WV19 159 aa10.68□□□□□ -0.7
UFD1-202ENST00000399523 CNFNQ9BYD5 112 aa10.68□□□□□ -0.7
UFD1-202ENST00000399523 FAM168BA1KXE4 195 aa10.67□□□□□ -0.7
UFD1-202ENST00000399523 CTRLP40313 264 aa10.67□□□□□ -0.7
UFD1-202ENST00000399523 MRPL52Q86TS9 123 aaKnown RBP10.67□□□□□ -0.7
UFD1-202ENST00000399523 CYTL1Q9NRR1 136 aa10.67□□□□□ -0.7
UFD1-202ENST00000399523 C1orf196B1AJZ1 125 aa10.66□□□□□ -0.7
UFD1-202ENST00000399523 I3L3M4 83 aa10.66□□□□□ -0.7
UFD1-202ENST00000399523 DEFA1P59665 94 aa10.66□□□□□ -0.7
UFD1-202ENST00000399523 TWIST1Q15672 202 aa10.66□□□□□ -0.7
UFD1-202ENST00000399523 CENPWQ5EE01 88 aa10.66□□□□□ -0.7
UFD1-202ENST00000399523 FXYD6-FXYD2A0A087WZ82 144 aa10.65□□□□□ -0.7
UFD1-202ENST00000399523 TEX261Q6UWH6 196 aa10.65□□□□□ -0.7
UFD1-202ENST00000399523 C11orf52Q96A22 123 aa10.65□□□□□ -0.7
UFD1-202ENST00000399523 A0A1B0GV50 99 aa10.64□□□□□ -0.71
UFD1-202ENST00000399523 G3V3Q6 166 aa10.64□□□□□ -0.71
UFD1-202ENST00000399523 GIPP09681 153 aaPredicted RBP10.64□□□□□ -0.71
UFD1-202ENST00000399523 PMCHP20382 165 aa10.64□□□□□ -0.71
UFD1-202ENST00000399523 KCNRGQ8N5I3 272 aa10.64□□□□□ -0.71
UFD1-202ENST00000399523 MRAP2Q96G30 205 aa10.64□□□□□ -0.71
UFD1-202ENST00000399523 RPP21Q9H633 154 aaKnown RBP10.64□□□□□ -0.71
UFD1-202ENST00000399523 TSHBP01222 138 aa10.63□□□□□ -0.71
UFD1-202ENST00000399523 SMIM12Q96EX1 92 aa10.63□□□□□ -0.71
UFD1-202ENST00000399523 FAM210AQ96ND0 272 aa10.63□□□□□ -0.71
UFD1-202ENST00000399523 MRPL35Q9NZE8 188 aaKnown RBP10.63□□□□□ -0.71
UFD1-202ENST00000399523 TRBV6-5A0A0K0K1A5 114 aa10.62□□□□□ -0.71
UFD1-202ENST00000399523 KRTAP7-1Q8IUC3 87 aa10.62□□□□□ -0.71
UFD1-202ENST00000399523 FAM213BQ8TBF2 198 aa10.62□□□□□ -0.71
UFD1-202ENST00000399523 IMMP2LQ96T52 175 aa10.62□□□□□ -0.71
UFD1-202ENST00000399523 TLX1NBP0CAT3 122 aa10.61□□□□□ -0.71
UFD1-202ENST00000399523 SPAG11BQ08648 103 aa10.61□□□□□ -0.71
UFD1-202ENST00000399523 FAM19A5Q7Z5A7 132 aaPredicted RBP10.61□□□□□ -0.71
UFD1-202ENST00000399523 FOXA3P55318 350 aaPredicted RBP10.6□□□□□ -0.71
UFD1-202ENST00000399523 C5orf38Q86SI9 138 aa10.6□□□□□ -0.71
UFD1-202ENST00000399523 TMEM242Q9NWH2 141 aa10.6□□□□□ -0.71
UFD1-202ENST00000399523 RAB19A4D1S5 217 aa10.59□□□□□ -0.71
UFD1-202ENST00000399523 UMAD1C9J7I0 102 aa10.59□□□□□ -0.71
UFD1-202ENST00000399523 F8WDY8 70 aa10.59□□□□□ -0.71
UFD1-202ENST00000399523 CCL20P78556 96 aa10.59□□□□□ -0.71
UFD1-202ENST00000399523 ZNF861PO60384 105 aa10.58□□□□□ -0.72
UFD1-202ENST00000399523 GNG4P50150 75 aa10.58□□□□□ -0.72
UFD1-202ENST00000399523 UBE2BP63146 152 aa10.58□□□□□ -0.72
UFD1-202ENST00000399523 OR10D4PQ8NGN7 298 aa10.58□□□□□ -0.72
UFD1-202ENST00000399523 CSDC2Q9Y534 153 aaKnown RBP10.58□□□□□ -0.72
UFD1-202ENST00000399523 C7orf77A4D0Y5 90 aa10.57□□□□□ -0.72
UFD1-202ENST00000399523 M0QXV9 152 aa10.57□□□□□ -0.72
UFD1-202ENST00000399523 TPRXLQ17RH7 258 aa10.57□□□□□ -0.72
UFD1-202ENST00000399523 SMIM15Q7Z3B0 74 aa10.57□□□□□ -0.72
UFD1-202ENST00000399523 NUDT10Q8NFP7 164 aa10.57□□□□□ -0.72
UFD1-202ENST00000399523 NUDT11Q96G61 164 aa10.57□□□□□ -0.72
UFD1-202ENST00000399523 RNASE7Q9H1E1 156 aaKnown RBP10.57□□□□□ -0.72
UFD1-202ENST00000399523 CDIP1Q9H305 208 aa10.57□□□□□ -0.72
UFD1-202ENST00000399523 BIN3Q9NQY0 253 aa10.57□□□□□ -0.72
UFD1-202ENST00000399523 TRBV20OR9-2A0A075B6H5 130 aa10.56□□□□□ -0.72
UFD1-202ENST00000399523 TRAV13-1A0A0B4J241 112 aa10.56□□□□□ -0.72
UFD1-202ENST00000399523 H2AFB1P0C5Y9 115 aa10.56□□□□□ -0.72
UFD1-202ENST00000399523 C10orf25Q5T742 122 aa10.56□□□□□ -0.72
UFD1-202ENST00000399523 ST20Q9HBF5 79 aa10.56□□□□□ -0.72
UFD1-202ENST00000399523 A0A087X002 238 aa10.55□□□□□ -0.72
UFD1-202ENST00000399523 TRBV27A0A0K0K1C4 114 aa10.55□□□□□ -0.72
UFD1-202ENST00000399523 POLR2KP53803 58 aaKnown RBP10.55□□□□□ -0.72
UFD1-202ENST00000399523 TMEM241Q24JQ0 296 aa10.55□□□□□ -0.72
UFD1-202ENST00000399523 SMDT1Q9H4I9 107 aa10.55□□□□□ -0.72
UFD1-202ENST00000399523 MANBALQ9NQG1 85 aa10.55□□□□□ -0.72
UFD1-202ENST00000399523 NDUFA1O15239 70 aa10.54□□□□□ -0.72
UFD1-202ENST00000399523 GAGE2EQ4V326 116 aa10.54□□□□□ -0.72
UFD1-202ENST00000399523 GAGE2DQ9UEU5 116 aa10.54□□□□□ -0.72
UFD1-202ENST00000399523 ARPC5O15511 151 aa10.53□□□□□ -0.72
UFD1-202ENST00000399523 RNASE13Q5GAN3 156 aaKnown RBP10.53□□□□□ -0.72
UFD1-202ENST00000399523 TYMSOSQ8TAI1 123 aa10.53□□□□□ -0.72
UFD1-202ENST00000399523 GNG13Q9P2W3 67 aa10.53□□□□□ -0.72
UFD1-202ENST00000399523 C6orf48Q9UBA6 75 aa10.53□□□□□ -0.72
UFD1-202ENST00000399523 UBE2D4Q9Y2X8 147 aa10.53□□□□□ -0.72
UFD1-202ENST00000399523 UNQ6190/PRO20217Q6UXQ8 127 aa10.52□□□□□ -0.73
UFD1-202ENST00000399523 ORAOV1Q8WV07 137 aa10.52□□□□□ -0.73
UFD1-202ENST00000399523 RETNLBQ9BQ08 111 aa10.52□□□□□ -0.73
UFD1-202ENST00000399523 CRYGAP11844 174 aa10.51□□□□□ -0.73
UFD1-202ENST00000399523 SMAGPQ0VAQ4 97 aa10.5□□□□□ -0.73
UFD1-202ENST00000399523 IGHV3OR16-9A0A0B4J2B5 98 aa10.48□□□□□ -0.73
UFD1-202ENST00000399523 NUPR1O60356 82 aa10.48□□□□□ -0.73
UFD1-202ENST00000399523 LINC01547P58512 204 aaPredicted RBP10.48□□□□□ -0.73
UFD1-202ENST00000399523 Q6ZUT4 128 aa10.48□□□□□ -0.73
UFD1-202ENST00000399523 IGLV7-46A0A075B6I9 117 aa10.47□□□□□ -0.73
UFD1-202ENST00000399523 PDE6DO43924 150 aa10.47□□□□□ -0.73
UFD1-202ENST00000399523 C9orf129Q5T035 196 aaKnown RBP10.47□□□□□ -0.73
UFD1-202ENST00000399523 MED9Q9NWA0 146 aa10.47□□□□□ -0.73
UFD1-202ENST00000399523 VCYO14598 125 aa10.46□□□□□ -0.73
UFD1-202ENST00000399523 TIMM21Q9BVV7 248 aa10.46□□□□□ -0.73
UFD1-202ENST00000399523 K7EN84 100 aa10.45□□□□□ -0.74
UFD1-202ENST00000399523 FCER1GP30273 86 aa10.45□□□□□ -0.74
UFD1-202ENST00000399523 NDUFC2-KCTD14E9PQ53 114 aa10.44□□□□□ -0.74
UFD1-202ENST00000399523 ZNF345Q14585 488 aa10.44□□□□□ -0.74
UFD1-202ENST00000399523 CTDSP1Q9GZU7 261 aa10.44□□□□□ -0.74
UFD1-202ENST00000399523 TRBV30A0A0K0K1B3 111 aa10.43□□□□□ -0.74
UFD1-202ENST00000399523 KIAA0087Q14695 138 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms