RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 TMEM89A2RUT3 159 aa8.44□□□□□ -1.06
ITSN1-211ENST00000399355 GATA3P23771 443 aa8.44□□□□□ -1.06
ITSN1-211ENST00000399355 CHCHD7Q9BUK0 85 aa8.44□□□□□ -1.06
ITSN1-211ENST00000399355 LYSTQ99698 3801 aa8.44□□□□□ -1.06
ITSN1-211ENST00000399355 Q1RN00 199 aa8.44□□□□□ -1.06
ITSN1-211ENST00000399355 Q8N3U1 123 aa8.43□□□□□ -1.06
ITSN1-211ENST00000399355 A0A1B0GV72 72 aa8.43□□□□□ -1.06
ITSN1-211ENST00000399355 STHQ8IWL8 128 aa8.43□□□□□ -1.06
ITSN1-211ENST00000399355 TMEM223A0PJW6 202 aa8.43□□□□□ -1.06
ITSN1-211ENST00000399355 NTM-AS1Q6ZSK4 140 aa8.43□□□□□ -1.06
ITSN1-211ENST00000399355 LINC00482Q8N8I6 264 aa8.43□□□□□ -1.06
ITSN1-211ENST00000399355 LINC01006Q8NI28 216 aa8.42□□□□□ -1.06
ITSN1-211ENST00000399355 DEFB130BP0DP73 79 aa8.42□□□□□ -1.06
ITSN1-211ENST00000399355 DEFB130AP0DP74 79 aa8.42□□□□□ -1.06
ITSN1-211ENST00000399355 UBE2D1P51668 147 aa8.42□□□□□ -1.06
ITSN1-211ENST00000399355 GIG44P09565 113 aaPredicted RBP8.41□□□□□ -1.06
ITSN1-211ENST00000399355 MED14OSP0DP75 135 aa8.41□□□□□ -1.06
ITSN1-211ENST00000399355 CLEC2BQ92478 149 aa8.41□□□□□ -1.06
ITSN1-211ENST00000399355 A0A0J9YXY3 114 aa8.41□□□□□ -1.06
ITSN1-211ENST00000399355 M0R2P5 195 aa8.41□□□□□ -1.06
ITSN1-211ENST00000399355 SLC25A29Q8N8R3 303 aa8.41□□□□□ -1.06
ITSN1-211ENST00000399355 TMEM141Q96I45 108 aa8.41□□□□□ -1.06
ITSN1-211ENST00000399355 TIMM17AQ99595 171 aa8.41□□□□□ -1.06
ITSN1-211ENST00000399355 TIMM21Q9BVV7 248 aa8.41□□□□□ -1.06
ITSN1-211ENST00000399355 DSCR9P59020 149 aa8.4□□□□□ -1.06
ITSN1-211ENST00000399355 KRTAP1-1Q07627 177 aa8.4□□□□□ -1.06
ITSN1-211ENST00000399355 UBE2D4Q9Y2X8 147 aa8.4□□□□□ -1.06
ITSN1-211ENST00000399355 OR5A1Q8NGJ0 315 aa8.4□□□□□ -1.06
ITSN1-211ENST00000399355 TRGV11A0A075B6L2 103 aa8.39□□□□□ -1.07
ITSN1-211ENST00000399355 HERVK_113P61574 105 aa8.39□□□□□ -1.07
ITSN1-211ENST00000399355 C4orf3Q8WVX3 66 aa8.39□□□□□ -1.07
ITSN1-211ENST00000399355 TRBV6-5A0A0K0K1A5 114 aa8.39□□□□□ -1.07
ITSN1-211ENST00000399355 C9JAW5 83 aa8.39□□□□□ -1.07
ITSN1-211ENST00000399355 KRTAP10-3P60369 221 aa8.39□□□□□ -1.07
ITSN1-211ENST00000399355 DGAT2L7PQ6IED9 249 aa8.39□□□□□ -1.07
ITSN1-211ENST00000399355 CARD19Q96LW7 228 aa8.39□□□□□ -1.07
ITSN1-211ENST00000399355 DNAJC30Q96LL9 226 aa8.38□□□□□ -1.07
ITSN1-211ENST00000399355 NDUFA12Q9UI09 145 aa8.38□□□□□ -1.07
ITSN1-211ENST00000399355 J3QLI3 93 aa8.38□□□□□ -1.07
ITSN1-211ENST00000399355 CRLF1O75462 422 aa8.38□□□□□ -1.07
ITSN1-211ENST00000399355 TRGV2A0A075B6R0 118 aa8.38□□□□□ -1.07
ITSN1-211ENST00000399355 TOMM7Q9P0U1 55 aa8.38□□□□□ -1.07
ITSN1-211ENST00000399355 PIK3CD-AS1Q5SR53 167 aa8.38□□□□□ -1.07
ITSN1-211ENST00000399355 INSP01308 110 aa8.37□□□□□ -1.07
ITSN1-211ENST00000399355 ZNF415Q09FC8 603 aa8.37□□□□□ -1.07
ITSN1-211ENST00000399355 TRBV7-9A0A0J9YWB2 115 aa8.37□□□□□ -1.07
ITSN1-211ENST00000399355 GAGE12HA6NDE8 117 aa8.37□□□□□ -1.07
ITSN1-211ENST00000399355 PPP1R17O96001 155 aa8.37□□□□□ -1.07
ITSN1-211ENST00000399355 GAGE6Q13070 117 aa8.37□□□□□ -1.07
ITSN1-211ENST00000399355 Q8N2B8 174 aa8.37□□□□□ -1.07
ITSN1-211ENST00000399355 LITAFQ99732 161 aa8.37□□□□□ -1.07
ITSN1-211ENST00000399355 GEMIN7Q9H840 131 aaKnown RBP8.37□□□□□ -1.07
ITSN1-211ENST00000399355 PEMTQ9UBM1 199 aa8.37□□□□□ -1.07
ITSN1-211ENST00000399355 PRO1854Q9UHT4 67 aa8.36□□□□□ -1.07
ITSN1-211ENST00000399355 TEX49A0A1B0GTD5 131 aa8.36□□□□□ -1.07
ITSN1-211ENST00000399355 TRIAP1O43715 76 aa8.36□□□□□ -1.07
ITSN1-211ENST00000399355 MT-ATP8P03928 68 aa8.36□□□□□ -1.07
ITSN1-211ENST00000399355 ANKRD29Q8N6D5 301 aa8.36□□□□□ -1.07
ITSN1-211ENST00000399355 Q9H8V8 135 aa8.35□□□□□ -1.07
ITSN1-211ENST00000399355 COL7A1Q02388 2944 aa8.35□□□□□ -1.07
ITSN1-211ENST00000399355 IGLV4-60A0A075B6I1 120 aa8.35□□□□□ -1.07
ITSN1-211ENST00000399355 IGHV3-33P01772 117 aa8.35□□□□□ -1.07
ITSN1-211ENST00000399355 TMEM101Q96IK0 257 aa8.35□□□□□ -1.07
ITSN1-211ENST00000399355 TMEM238C9JI98 176 aa8.34□□□□□ -1.07
ITSN1-211ENST00000399355 RNF152Q8N8N0 203 aa8.34□□□□□ -1.07
ITSN1-211ENST00000399355 LEPROTO15243 131 aa8.34□□□□□ -1.07
ITSN1-211ENST00000399355 LINC00242Q5T6M2 205 aa8.34□□□□□ -1.07
ITSN1-211ENST00000399355 SOSTDC1Q6X4U4 206 aa8.34□□□□□ -1.07
ITSN1-211ENST00000399355 TMEM263Q8WUH6 116 aaKnown RBP8.34□□□□□ -1.07
ITSN1-211ENST00000399355 UBE2D3P61077 147 aa8.33□□□□□ -1.08
ITSN1-211ENST00000399355 UBE2D2P62837 147 aa8.33□□□□□ -1.08
ITSN1-211ENST00000399355 VSIG2Q96IQ7 327 aa8.33□□□□□ -1.08
ITSN1-211ENST00000399355 A8MWV9 139 aa8.33□□□□□ -1.08
ITSN1-211ENST00000399355 RHOHQ15669 191 aa8.33□□□□□ -1.08
ITSN1-211ENST00000399355 XGP55808 180 aa8.33□□□□□ -1.08
ITSN1-211ENST00000399355 TAL2Q16559 108 aa8.33□□□□□ -1.08
ITSN1-211ENST00000399355 LINC00526Q96FQ7 95 aa8.33□□□□□ -1.08
ITSN1-211ENST00000399355 ODF3Q96PU9 254 aa8.33□□□□□ -1.08
ITSN1-211ENST00000399355 PLAC8L1A1L4L8 177 aa8.32□□□□□ -1.08
ITSN1-211ENST00000399355 F8W1H4 67 aa8.32□□□□□ -1.08
ITSN1-211ENST00000399355 MRPS36P82909 103 aaKnown RBP8.32□□□□□ -1.08
ITSN1-211ENST00000399355 FOXI1Q12951 378 aa8.32□□□□□ -1.08
ITSN1-211ENST00000399355 STAB2Q8WWQ8 2551 aa8.32□□□□□ -1.08
ITSN1-211ENST00000399355 C5orf38Q86SI9 138 aa8.32□□□□□ -1.08
ITSN1-211ENST00000399355 NTN5Q8WTR8 489 aaPredicted RBP8.32□□□□□ -1.08
ITSN1-211ENST00000399355 SRRM2Q9UQ35 2752 aaKnown RBP8.32□□□□□ -1.08
ITSN1-211ENST00000399355 IGLV10-54A0A075B6I4 117 aa8.32□□□□□ -1.08
ITSN1-211ENST00000399355 J3QR89 54 aa8.32□□□□□ -1.08
ITSN1-211ENST00000399355 IGHV1-58A0A0C4DH39 117 aa8.31□□□□□ -1.08
ITSN1-211ENST00000399355 TMEM238LA0A1B0GVL6 79 aa8.31□□□□□ -1.08
ITSN1-211ENST00000399355 A6NJY4 79 aa8.31□□□□□ -1.08
ITSN1-211ENST00000399355 SAMD13Q5VXD3 122 aa8.31□□□□□ -1.08
ITSN1-211ENST00000399355 CDIP1Q9H305 208 aa8.31□□□□□ -1.08
ITSN1-211ENST00000399355 ERG28Q9UKR5 140 aa8.31□□□□□ -1.08
ITSN1-211ENST00000399355 INAFM1C9JVW0 142 aa8.31□□□□□ -1.08
ITSN1-211ENST00000399355 PFN2P35080 140 aa8.3□□□□□ -1.08
ITSN1-211ENST00000399355 SLC25A20O43772 301 aa8.29□□□□□ -1.08
ITSN1-211ENST00000399355 RPL32P62910 135 aaKnown RBP8.29□□□□□ -1.08
ITSN1-211ENST00000399355 TRGV4A0A0C4DH28 118 aa8.29□□□□□ -1.08
ITSN1-211ENST00000399355 HTN3P15516 51 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms