RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 CDSNQ15517 529 aa12.05□□□□□ -0.48
PCDHA12-201ENST00000398631 J3KT08 172 aa12.05□□□□□ -0.48
PCDHA12-201ENST00000398631 HIGD2AQ9BW72 106 aa12.05□□□□□ -0.48
PCDHA12-201ENST00000398631 FN1P02751 2386 aaKnown RBP12.04□□□□□ -0.48
PCDHA12-201ENST00000398631 HIST2H2BDQ6DRA6 164 aa12.04□□□□□ -0.48
PCDHA12-201ENST00000398631 IGLV1-40P01703 118 aa12.04□□□□□ -0.48
PCDHA12-201ENST00000398631 ARHGAP32A7KAX9 2087 aa12.03□□□□□ -0.48
PCDHA12-201ENST00000398631 ZNF22P17026 224 aaPredicted RBP12.03□□□□□ -0.48
PCDHA12-201ENST00000398631 TANC2Q9HCD6 1990 aa12.03□□□□□ -0.48
PCDHA12-201ENST00000398631 TRAV10A0A0B4J240 114 aa12.03□□□□□ -0.48
PCDHA12-201ENST00000398631 PLA2G2AP14555 144 aa12.02□□□□□ -0.49
PCDHA12-201ENST00000398631 LINC00643Q86TS7 51 aa12.02□□□□□ -0.49
PCDHA12-201ENST00000398631 Q8N976 141 aa12.02□□□□□ -0.49
PCDHA12-201ENST00000398631 MUC22E2RYF6 1773 aaPredicted RBP12.02□□□□□ -0.49
PCDHA12-201ENST00000398631 Q6ZS46 218 aa12.02□□□□□ -0.49
PCDHA12-201ENST00000398631 ZNF462Q96JM2 2506 aa12.01□□□□□ -0.49
PCDHA12-201ENST00000398631 LRRK2Q5S007 2527 aa12.01□□□□□ -0.49
PCDHA12-201ENST00000398631 IBA57-AS1B1ANH7 110 aa12.01□□□□□ -0.49
PCDHA12-201ENST00000398631 BBC3Q96PG8 261 aaPredicted RBP12.01□□□□□ -0.49
PCDHA12-201ENST00000398631 TRBV27A0A0K0K1C4 114 aa12□□□□□ -0.49
PCDHA12-201ENST00000398631 TRBV6-5A0A0K0K1A5 114 aa12□□□□□ -0.49
PCDHA12-201ENST00000398631 NUP210LQ5VU65 1888 aa12□□□□□ -0.49
PCDHA12-201ENST00000398631 IGLV2-11P01706 119 aa12□□□□□ -0.49
PCDHA12-201ENST00000398631 KIR2DL5BQ8NHK3 375 aa12□□□□□ -0.49
PCDHA12-201ENST00000398631 TNRC6BQ9UPQ9 1833 aaKnown RBP12□□□□□ -0.49
PCDHA12-201ENST00000398631 PROK1P58294 105 aa12□□□□□ -0.49
PCDHA12-201ENST00000398631 C18orf65Q6ZTR6 163 aa11.99□□□□□ -0.49
PCDHA12-201ENST00000398631 IGKV2D-26A0A0A0MRZ7 120 aa11.99□□□□□ -0.49
PCDHA12-201ENST00000398631 RNF185Q96GF1 192 aa11.99□□□□□ -0.49
PCDHA12-201ENST00000398631 KLLNB2CW77 178 aa11.99□□□□□ -0.49
PCDHA12-201ENST00000398631 RBX1P62877 108 aa11.99□□□□□ -0.49
PCDHA12-201ENST00000398631 TMEM223A0PJW6 202 aa11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 AVPP01185 164 aa11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 WFDC10AQ9H1F0 79 aa11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 TCL1BO95988 128 aa11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 RNASE3P12724 160 aaKnown RBP11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 NDUFC2O95298 119 aa11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 SYCNQ0VAF6 134 aa11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 YPEL4Q96NS1 127 aa11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 HCFC1P51610 2035 aa11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 PYGO1Q9Y3Y4 419 aa11.97□□□□□ -0.49
PCDHA12-201ENST00000398631 A0A087WZ39 114 aa11.97□□□□□ -0.49
PCDHA12-201ENST00000398631 PTH2Q96A98 100 aa11.97□□□□□ -0.49
PCDHA12-201ENST00000398631 H0Y9J4 135 aa11.96□□□□□ -0.49
PCDHA12-201ENST00000398631 CHKB-CPT1BH3BT56 60 aa11.96□□□□□ -0.49
PCDHA12-201ENST00000398631 U3KQK5 164 aa11.96□□□□□ -0.49
PCDHA12-201ENST00000398631 XAGE1AQ9HD64 81 aa11.96□□□□□ -0.49
PCDHA12-201ENST00000398631 KPRPQ5T749 579 aaPredicted RBP11.95□□□□□ -0.5
PCDHA12-201ENST00000398631 FAM19A1Q7Z5A9 133 aa11.95□□□□□ -0.5
PCDHA12-201ENST00000398631 DCANP1Q8TF63 244 aa11.95□□□□□ -0.5
PCDHA12-201ENST00000398631 C14orf132Q9NPU4 83 aa11.95□□□□□ -0.5
PCDHA12-201ENST00000398631 LINC00308Q8TCZ7 52 aa11.95□□□□□ -0.5
PCDHA12-201ENST00000398631 PRR9Q5T870 116 aa11.95□□□□□ -0.5
PCDHA12-201ENST00000398631 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.94□□□□□ -0.5
PCDHA12-201ENST00000398631 SPANXB1Q9NS25 103 aaPredicted RBP11.94□□□□□ -0.5
PCDHA12-201ENST00000398631 C11orf21Q9P2W6 132 aa11.94□□□□□ -0.5
PCDHA12-201ENST00000398631 KRTAP10-9P60411 292 aa11.94□□□□□ -0.5
PCDHA12-201ENST00000398631 SPTBN4Q9H254 2564 aa11.93□□□□□ -0.5
PCDHA12-201ENST00000398631 NDUFA7O95182 113 aa11.93□□□□□ -0.5
PCDHA12-201ENST00000398631 LELP1Q5T871 98 aa11.92□□□□□ -0.5
PCDHA12-201ENST00000398631 CD164L2Q6UWJ8 174 aa11.92□□□□□ -0.5
PCDHA12-201ENST00000398631 WFDC9Q8NEX5 89 aa11.92□□□□□ -0.5
PCDHA12-201ENST00000398631 A0A096LNI7 61 aa11.92□□□□□ -0.5
PCDHA12-201ENST00000398631 C9orf85Q96MD7 179 aa11.92□□□□□ -0.5
PCDHA12-201ENST00000398631 PIK3CD-AS1Q5SR53 167 aa11.92□□□□□ -0.5
PCDHA12-201ENST00000398631 BPY2O14599 106 aa11.91□□□□□ -0.5
PCDHA12-201ENST00000398631 TSHBP01222 138 aa11.91□□□□□ -0.5
PCDHA12-201ENST00000398631 C5orf47Q569G3 176 aa11.91□□□□□ -0.5
PCDHA12-201ENST00000398631 NRACQ8N912 160 aa11.91□□□□□ -0.5
PCDHA12-201ENST00000398631 FASNP49327 2511 aaKnown RBP11.91□□□□□ -0.5
PCDHA12-201ENST00000398631 FAM19A5Q7Z5A7 132 aaPredicted RBP11.9□□□□□ -0.5
PCDHA12-201ENST00000398631 PKD1L2Q7Z442 2459 aa11.9□□□□□ -0.5
PCDHA12-201ENST00000398631 LRCOL1A6NCL2 159 aa11.9□□□□□ -0.5
PCDHA12-201ENST00000398631 POLR2KP53803 58 aaKnown RBP11.9□□□□□ -0.51
PCDHA12-201ENST00000398631 OXLD1Q5BKU9 147 aa11.9□□□□□ -0.51
PCDHA12-201ENST00000398631 LRP4O75096 1905 aa11.89□□□□□ -0.51
PCDHA12-201ENST00000398631 NDUFV3P56181 108 aaKnown RBP11.89□□□□□ -0.51
PCDHA12-201ENST00000398631 IGLV2-18A0A075B6J9 118 aa11.88□□□□□ -0.51
PCDHA12-201ENST00000398631 LOC100131303A0A0U1RQF7 123 aa11.88□□□□□ -0.51
PCDHA12-201ENST00000398631 MRGPRG-AS1Q2M3A8 158 aa11.88□□□□□ -0.51
PCDHA12-201ENST00000398631 MAPKAPK5-AS1Q8N8E1 139 aa11.88□□□□□ -0.51
PCDHA12-201ENST00000398631 SMR3AQ99954 134 aa11.88□□□□□ -0.51
PCDHA12-201ENST00000398631 PRM2P04554 102 aa11.87□□□□□ -0.51
PCDHA12-201ENST00000398631 C6orf99Q4VX62 202 aa11.87□□□□□ -0.51
PCDHA12-201ENST00000398631 IGHV4-30-4P0DP06 118 aa11.87□□□□□ -0.51
PCDHA12-201ENST00000398631 ODF3L2Q3SX64 289 aa11.87□□□□□ -0.51
PCDHA12-201ENST00000398631 ATP5EP2Q5VTU8 51 aa11.87□□□□□ -0.51
PCDHA12-201ENST00000398631 UQCRQO14949 82 aa11.87□□□□□ -0.51
PCDHA12-201ENST00000398631 A0A1W2PPR1 153 aa11.86□□□□□ -0.51
PCDHA12-201ENST00000398631 LINC00959A0A1B0GUT2 108 aa11.86□□□□□ -0.51
PCDHA12-201ENST00000398631 PRB2P02812 416 aaPredicted RBP11.86□□□□□ -0.51
PCDHA12-201ENST00000398631 C7orf33Q8WU49 177 aa11.86□□□□□ -0.51
PCDHA12-201ENST00000398631 MRPS36P82909 103 aaKnown RBP11.86□□□□□ -0.51
PCDHA12-201ENST00000398631 CLUHP3Q96NS8 147 aa11.86□□□□□ -0.51
PCDHA12-201ENST00000398631 TRBV30A0A0K0K1B3 111 aa11.86□□□□□ -0.51
PCDHA12-201ENST00000398631 UBE2D4Q9Y2X8 147 aa11.85□□□□□ -0.51
PCDHA12-201ENST00000398631 TIMM17BO60830 172 aa11.85□□□□□ -0.51
PCDHA12-201ENST00000398631 MT-ATP8P03928 68 aa11.85□□□□□ -0.51
PCDHA12-201ENST00000398631 CRIP2P52943 208 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms