RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 NFE4Q86UQ8 179 aa13.02□□□□□ -0.32
MBD1-208ENST00000398493 TRGV4A0A0C4DH28 118 aa13.02□□□□□ -0.33
MBD1-208ENST00000398493 TRBV6-4A0A1B0GX49 114 aa13.02□□□□□ -0.33
MBD1-208ENST00000398493 TMEM170BQ5T4T1 132 aa13.02□□□□□ -0.33
MBD1-208ENST00000398493 SLC25A29Q8N8R3 303 aa13.02□□□□□ -0.33
MBD1-208ENST00000398493 TTTY13Q9BZ97 58 aa13.02□□□□□ -0.33
MBD1-208ENST00000398493 RETNQ9HD89 108 aa13.02□□□□□ -0.33
MBD1-208ENST00000398493 MYMXA0A1B0GTQ4 84 aa13.01□□□□□ -0.33
MBD1-208ENST00000398493 EMP1P54849 157 aa13.01□□□□□ -0.33
MBD1-208ENST00000398493 SMAGPQ0VAQ4 97 aa13.01□□□□□ -0.33
MBD1-208ENST00000398493 GTF2H5Q6ZYL4 71 aa13.01□□□□□ -0.33
MBD1-208ENST00000398493 PRADC1Q9BSG0 188 aa13.01□□□□□ -0.33
MBD1-208ENST00000398493 K7EP13 123 aa13□□□□□ -0.33
MBD1-208ENST00000398493 SMIM13P0DJ93 91 aa13□□□□□ -0.33
MBD1-208ENST00000398493 DEFB135Q30KP9 77 aa13□□□□□ -0.33
MBD1-208ENST00000398493 CEND1Q8N111 149 aa13□□□□□ -0.33
MBD1-208ENST00000398493 MAPKAPK5-AS1Q8N8E1 139 aa13□□□□□ -0.33
MBD1-208ENST00000398493 AMELXQ99217 191 aa13□□□□□ -0.33
MBD1-208ENST00000398493 AMMECR1LQ6DCA0 310 aa12.99□□□□□ -0.33
MBD1-208ENST00000398493 UBE2D4Q9Y2X8 147 aa12.99□□□□□ -0.33
MBD1-208ENST00000398493 GCSHP23434 173 aa12.99□□□□□ -0.33
MBD1-208ENST00000398493 UBE2D3P61077 147 aa12.99□□□□□ -0.33
MBD1-208ENST00000398493 UBE2D2P62837 147 aa12.99□□□□□ -0.33
MBD1-208ENST00000398493 DGAT2L7PQ6IED9 249 aa12.99□□□□□ -0.33
MBD1-208ENST00000398493 TM2D3Q9BRN9 247 aa12.99□□□□□ -0.33
MBD1-208ENST00000398493 TIMM21Q9BVV7 248 aa12.99□□□□□ -0.33
MBD1-208ENST00000398493 TGP01266 2768 aa12.98□□□□□ -0.33
MBD1-208ENST00000398493 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.98□□□□□ -0.33
MBD1-208ENST00000398493 IGKV2-29A2NJV5 120 aaPredicted RBP12.98□□□□□ -0.33
MBD1-208ENST00000398493 GAGE12JA6NER3 117 aa12.98□□□□□ -0.33
MBD1-208ENST00000398493 GAGE4Q13068 117 aa12.98□□□□□ -0.33
MBD1-208ENST00000398493 GAGE5Q13069 117 aa12.98□□□□□ -0.33
MBD1-208ENST00000398493 GAGE13Q4V321 117 aa12.98□□□□□ -0.33
MBD1-208ENST00000398493 GAGE10A6NGK3 116 aa12.96□□□□□ -0.33
MBD1-208ENST00000398493 MRPS36P82909 103 aaKnown RBP12.96□□□□□ -0.33
MBD1-208ENST00000398493 GTSF1LQ9H1H1 148 aa12.96□□□□□ -0.33
MBD1-208ENST00000398493 X6R8D5 127 aa12.96□□□□□ -0.33
MBD1-208ENST00000398493 A0A0J9YXV3 536 aa12.95□□□□□ -0.34
MBD1-208ENST00000398493 ZNF815PA8K554 130 aa12.95□□□□□ -0.34
MBD1-208ENST00000398493 CEMP1Q6PRD7 247 aaPredicted RBP12.95□□□□□ -0.34
MBD1-208ENST00000398493 RNF183Q96D59 192 aa12.95□□□□□ -0.34
MBD1-208ENST00000398493 FHL2Q14192 279 aa12.95□□□□□ -0.34
MBD1-208ENST00000398493 LINC00612Q8N6U2 182 aa12.95□□□□□ -0.34
MBD1-208ENST00000398493 DEFB130BP0DP73 79 aa12.94□□□□□ -0.34
MBD1-208ENST00000398493 DEFB130AP0DP74 79 aa12.94□□□□□ -0.34
MBD1-208ENST00000398493 FXYD2P54710 66 aa12.94□□□□□ -0.34
MBD1-208ENST00000398493 OR5A1Q8NGJ0 315 aa12.94□□□□□ -0.34
MBD1-208ENST00000398493 HIST1H4GQ99525 98 aa12.94□□□□□ -0.34
MBD1-208ENST00000398493 SPATA25Q9BR10 227 aa12.94□□□□□ -0.34
MBD1-208ENST00000398493 TMEM223A0PJW6 202 aa12.93□□□□□ -0.34
MBD1-208ENST00000398493 LYRM9A8MSI8 78 aa12.93□□□□□ -0.34
MBD1-208ENST00000398493 H3BUT2 72 aa12.93□□□□□ -0.34
MBD1-208ENST00000398493 ZNF22P17026 224 aaPredicted RBP12.93□□□□□ -0.34
MBD1-208ENST00000398493 SCGB1D4Q6XE38 83 aa12.93□□□□□ -0.34
MBD1-208ENST00000398493 FAM104AQ969W3 186 aa12.93□□□□□ -0.34
MBD1-208ENST00000398493 A0A1W2PPM0 123 aa12.92□□□□□ -0.34
MBD1-208ENST00000398493 K7EP34 96 aa12.92□□□□□ -0.34
MBD1-208ENST00000398493 LEPROTO15243 131 aa12.92□□□□□ -0.34
MBD1-208ENST00000398493 FABP2P12104 132 aa12.92□□□□□ -0.34
MBD1-208ENST00000398493 LGALS3P17931 250 aaKnown RBP12.92□□□□□ -0.34
MBD1-208ENST00000398493 CSDC2Q9Y534 153 aaKnown RBP12.92□□□□□ -0.34
MBD1-208ENST00000398493 TINCRA0A1B0GVN0 87 aa12.92□□□□□ -0.34
MBD1-208ENST00000398493 PLEKHB2Q96CS7 222 aa12.92□□□□□ -0.34
MBD1-208ENST00000398493 STAB2Q8WWQ8 2551 aa12.92□□□□□ -0.34
MBD1-208ENST00000398493 TMEM238LA0A1B0GVL6 79 aa12.91□□□□□ -0.34
MBD1-208ENST00000398493 A6NJY4 79 aa12.91□□□□□ -0.34
MBD1-208ENST00000398493 H7C423 109 aa12.91□□□□□ -0.34
MBD1-208ENST00000398493 J3QQQ9 107 aa12.91□□□□□ -0.34
MBD1-208ENST00000398493 UBE2L6O14933 153 aa12.91□□□□□ -0.34
MBD1-208ENST00000398493 Q6ZUT4 128 aa12.91□□□□□ -0.34
MBD1-208ENST00000398493 TMEM243Q9BU79 118 aa12.91□□□□□ -0.34
MBD1-208ENST00000398493 NTM-AS1Q6ZSK4 140 aa12.9□□□□□ -0.34
MBD1-208ENST00000398493 NHLRC4P0CG21 123 aaPredicted RBP12.9□□□□□ -0.34
MBD1-208ENST00000398493 RNASE13Q5GAN3 156 aaKnown RBP12.9□□□□□ -0.34
MBD1-208ENST00000398493 TMEM101Q96IK0 257 aa12.9□□□□□ -0.34
MBD1-208ENST00000398493 GEMIN7Q9H840 131 aaKnown RBP12.9□□□□□ -0.34
MBD1-208ENST00000398493 A0A1B0GWB2 263 aa12.89□□□□□ -0.35
MBD1-208ENST00000398493 NHP2Q9NX24 153 aaKnown RBP12.89□□□□□ -0.35
MBD1-208ENST00000398493 MIFP14174 115 aa12.88□□□□□ -0.35
MBD1-208ENST00000398493 RAB37Q96AX2 223 aa12.88□□□□□ -0.35
MBD1-208ENST00000398493 DNAH7Q8WXX0 4024 aa12.88□□□□□ -0.35
MBD1-208ENST00000398493 LOC100131303A0A0U1RQF7 123 aa12.88□□□□□ -0.35
MBD1-208ENST00000398493 TIRAPP58753 221 aa12.88□□□□□ -0.35
MBD1-208ENST00000398493 FAM222AQ5U5X8 452 aa12.88□□□□□ -0.35
MBD1-208ENST00000398493 UBE2D1P51668 147 aa12.87□□□□□ -0.35
MBD1-208ENST00000398493 SRSF9Q13242 221 aaKnown RBP eCLIP12.87□□□□□ -0.35
MBD1-208ENST00000398493 SPCS1Q9Y6A9 102 aa12.87□□□□□ -0.35
MBD1-208ENST00000398493 DEFB4AO15263 64 aa12.86□□□□□ -0.35
MBD1-208ENST00000398493 SPANXB1Q9NS25 103 aaPredicted RBP12.86□□□□□ -0.35
MBD1-208ENST00000398493 PRO0255Q9UI72 69 aa12.86□□□□□ -0.35
MBD1-208ENST00000398493 LINC00694P0DN24 101 aa12.85□□□□□ -0.35
MBD1-208ENST00000398493 C12orf74Q32Q52 190 aa12.85□□□□□ -0.35
MBD1-208ENST00000398493 CBY1Q9Y3M2 126 aa12.85□□□□□ -0.35
MBD1-208ENST00000398493 IGHV4-28A0A0C4DH34 117 aa12.85□□□□□ -0.35
MBD1-208ENST00000398493 Q8NAQ8 132 aa12.85□□□□□ -0.35
MBD1-208ENST00000398493 TSPEAR-AS2P59090 65 aa12.84□□□□□ -0.35
MBD1-208ENST00000398493 HERVK_113P63121 156 aa12.84□□□□□ -0.35
MBD1-208ENST00000398493 CDC42SE2Q9NRR3 84 aa12.84□□□□□ -0.35
MBD1-208ENST00000398493 TRBV6-8A0A0A6YYG3 113 aa12.83□□□□□ -0.35
MBD1-208ENST00000398493 IGHV1-58A0A0C4DH39 117 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms