RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 LYSTQ99698 3801 aa14.52□□□□□ -0.09
CPNE1-204ENST00000397443 MRPL52Q86TS9 123 aaKnown RBP14.51□□□□□ -0.09
CPNE1-204ENST00000397443 MUC7Q8TAX7 377 aa14.51□□□□□ -0.09
CPNE1-204ENST00000397443 LINC00588Q9Y4M8 146 aa14.51□□□□□ -0.09
CPNE1-204ENST00000397443 DYNC2H1Q8NCM8 4307 aaKnown RBP14.51□□□□□ -0.09
CPNE1-204ENST00000397443 A0A087WX48 190 aa14.51□□□□□ -0.09
CPNE1-204ENST00000397443 SCGB1D1O95968 90 aa14.51□□□□□ -0.09
CPNE1-204ENST00000397443 CCL18P55774 89 aa14.51□□□□□ -0.09
CPNE1-204ENST00000397443 RBX1P62877 108 aa14.5□□□□□ -0.09
CPNE1-204ENST00000397443 WWC2-AS2Q96NR7 200 aa14.5□□□□□ -0.09
CPNE1-204ENST00000397443 TIMM21Q9BVV7 248 aa14.5□□□□□ -0.09
CPNE1-204ENST00000397443 VCX2Q9H322 139 aa14.5□□□□□ -0.09
CPNE1-204ENST00000397443 PLECQ15149 4684 aaKnown RBP14.49□□□□□ -0.09
CPNE1-204ENST00000397443 IGKV3OR2-268A0A0C4DH90 116 aa14.49□□□□□ -0.09
CPNE1-204ENST00000397443 IGHV3-30P01768 117 aa14.49□□□□□ -0.09
CPNE1-204ENST00000397443 IGHV3-33P01772 117 aa14.49□□□□□ -0.09
CPNE1-204ENST00000397443 IGHV3-30-3P0DP02 117 aa14.49□□□□□ -0.09
CPNE1-204ENST00000397443 IGHV3-30-5P0DP03 117 aa14.49□□□□□ -0.09
CPNE1-204ENST00000397443 SMAGPQ0VAQ4 97 aa14.49□□□□□ -0.09
CPNE1-204ENST00000397443 PRSS29PA6NIE9 313 aa14.48□□□□□ -0.09
CPNE1-204ENST00000397443 CDC42SE2Q9NRR3 84 aa14.48□□□□□ -0.09
CPNE1-204ENST00000397443 ZNF25P17030 456 aaPredicted RBP14.47□□□□□ -0.09
CPNE1-204ENST00000397443 PMVKQ15126 192 aa14.47□□□□□ -0.09
CPNE1-204ENST00000397443 CLPSL2Q6UWE3 100 aa14.47□□□□□ -0.09
CPNE1-204ENST00000397443 TEX43Q6ZNM6 134 aa14.47□□□□□ -0.09
CPNE1-204ENST00000397443 ZNF664Q8N3J9 261 aa14.47□□□□□ -0.09
CPNE1-204ENST00000397443 PYY3Q5JQD4 70 aa14.47□□□□□ -0.09
CPNE1-204ENST00000397443 PET117Q6UWS5 81 aa14.47□□□□□ -0.09
CPNE1-204ENST00000397443 CST9LQ9H4G1 147 aa14.47□□□□□ -0.09
CPNE1-204ENST00000397443 CSDC2Q9Y534 153 aaKnown RBP14.47□□□□□ -0.09
CPNE1-204ENST00000397443 PAPPA-AS1Q5QFB9 102 aa14.46□□□□□ -0.09
CPNE1-204ENST00000397443 ATOH7Q8N100 152 aa14.46□□□□□ -0.09
CPNE1-204ENST00000397443 ANGP03950 147 aaKnown RBP14.45□□□□□ -0.1
CPNE1-204ENST00000397443 MRPS36P82909 103 aaKnown RBP14.45□□□□□ -0.1
CPNE1-204ENST00000397443 ODF1Q14990 250 aa14.45□□□□□ -0.1
CPNE1-204ENST00000397443 UBE2DNLQ8IWF7 75 aa14.45□□□□□ -0.1
CPNE1-204ENST00000397443 MRPL35Q9NZE8 188 aaKnown RBP14.45□□□□□ -0.1
CPNE1-204ENST00000397443 MRPS16Q9Y3D3 137 aaKnown RBP14.45□□□□□ -0.1
CPNE1-204ENST00000397443 TRAV13-1A0A0B4J241 112 aa14.44□□□□□ -0.1
CPNE1-204ENST00000397443 A0A1B0GUV1 79 aa14.44□□□□□ -0.1
CPNE1-204ENST00000397443 JOSD1Q15040 202 aaPredicted RBP14.44□□□□□ -0.1
CPNE1-204ENST00000397443 AMELXQ99217 191 aa14.44□□□□□ -0.1
CPNE1-204ENST00000397443 CHTOPQ9Y3Y2 248 aaKnown RBP14.44□□□□□ -0.1
CPNE1-204ENST00000397443 LINC01545Q5VT33 79 aa14.43□□□□□ -0.1
CPNE1-204ENST00000397443 TRAV12-1A0A0B4J245 112 aa14.43□□□□□ -0.1
CPNE1-204ENST00000397443 C20orf202A1L168 122 aa14.43□□□□□ -0.1
CPNE1-204ENST00000397443 LINC00269Q8N2A0 174 aa14.43□□□□□ -0.1
CPNE1-204ENST00000397443 C2orf88Q9BSF0 95 aa14.43□□□□□ -0.1
CPNE1-204ENST00000397443 KLK12Q9UKR0 248 aa14.43□□□□□ -0.1
CPNE1-204ENST00000397443 NPSP0C0P6 89 aa14.42□□□□□ -0.1
CPNE1-204ENST00000397443 LGALS9CQ6DKI2 356 aa14.42□□□□□ -0.1
CPNE1-204ENST00000397443 CDPF1Q6NVV7 123 aa14.42□□□□□ -0.1
CPNE1-204ENST00000397443 PKIAP61925 76 aa14.41□□□□□ -0.1
CPNE1-204ENST00000397443 A0A0J9YXV3 536 aa14.4□□□□□ -0.1
CPNE1-204ENST00000397443 SIVA1O15304 175 aa14.4□□□□□ -0.1
CPNE1-204ENST00000397443 F8VRH5 84 aa14.39□□□□□ -0.11
CPNE1-204ENST00000397443 TCTAP57738 103 aa14.39□□□□□ -0.11
CPNE1-204ENST00000397443 IGLV4-69A0A075B6H9 119 aa14.38□□□□□ -0.11
CPNE1-204ENST00000397443 UBE2D1P51668 147 aa14.37□□□□□ -0.11
CPNE1-204ENST00000397443 REG3AQ06141 175 aa14.37□□□□□ -0.11
CPNE1-204ENST00000397443 Q9H8V8 135 aa14.37□□□□□ -0.11
CPNE1-204ENST00000397443 DPM2O94777 84 aa14.37□□□□□ -0.11
CPNE1-204ENST00000397443 LINC01556Q5JQF7 62 aa14.37□□□□□ -0.11
CPNE1-204ENST00000397443 CASC10Q5T4H9 136 aa14.37□□□□□ -0.11
CPNE1-204ENST00000397443 C11orf86A6NJI1 115 aa14.36□□□□□ -0.11
CPNE1-204ENST00000397443 IGKCP01834 107 aa14.36□□□□□ -0.11
CPNE1-204ENST00000397443 UBE2WQ96B02 151 aa14.36□□□□□ -0.11
CPNE1-204ENST00000397443 UPK3BQ9BT76 320 aa14.36□□□□□ -0.11
CPNE1-204ENST00000397443 CHAC1Q9BUX1 264 aa14.36□□□□□ -0.11
CPNE1-204ENST00000397443 IGLV10-54A0A075B6I4 117 aa14.35□□□□□ -0.11
CPNE1-204ENST00000397443 DNAH10OSP0CZ25 163 aa14.35□□□□□ -0.11
CPNE1-204ENST00000397443 MAJINQ3KP22 176 aa14.35□□□□□ -0.11
CPNE1-204ENST00000397443 LINC00959A0A1B0GUT2 108 aa14.34□□□□□ -0.11
CPNE1-204ENST00000397443 CRPP02741 224 aa14.33□□□□□ -0.11
CPNE1-204ENST00000397443 SMIM6P0DI80 62 aa14.33□□□□□ -0.11
CPNE1-204ENST00000397443 PLNP26678 52 aa14.33□□□□□ -0.11
CPNE1-204ENST00000397443 hDV102S1A0JD36 115 aa14.33□□□□□ -0.12
CPNE1-204ENST00000397443 COX6A2Q02221 97 aa14.33□□□□□ -0.12
CPNE1-204ENST00000397443 LINC00242Q5T6M2 205 aa14.33□□□□□ -0.12
CPNE1-204ENST00000397443 ENHOQ6UWT2 76 aa14.33□□□□□ -0.12
CPNE1-204ENST00000397443 GEMIN7Q9H840 131 aaKnown RBP14.33□□□□□ -0.12
CPNE1-204ENST00000397443 TMEM170BQ5T4T1 132 aa14.32□□□□□ -0.12
CPNE1-204ENST00000397443 IGLC3P0DOY3 106 aa14.31□□□□□ -0.12
CPNE1-204ENST00000397443 XCL1P47992 114 aa14.31□□□□□ -0.12
CPNE1-204ENST00000397443 STPG4Q8N801 248 aa14.31□□□□□ -0.12
CPNE1-204ENST00000397443 SS18Q15532 418 aa14.31□□□□□ -0.12
CPNE1-204ENST00000397443 C12orf57Q99622 126 aa14.31□□□□□ -0.12
CPNE1-204ENST00000397443 TINCRA0A1B0GVN0 87 aa14.3□□□□□ -0.12
CPNE1-204ENST00000397443 CCL25O15444 150 aa14.3□□□□□ -0.12
CPNE1-204ENST00000397443 LINC00469Q8N7U9 141 aa14.3□□□□□ -0.12
CPNE1-204ENST00000397443 PRR34Q9NV39 138 aa14.3□□□□□ -0.12
CPNE1-204ENST00000397443 C3orf84H3BNL1 204 aa14.29□□□□□ -0.12
CPNE1-204ENST00000397443 NFE4Q86UQ8 179 aa14.29□□□□□ -0.12
CPNE1-204ENST00000397443 Q9HAA7 133 aa14.29□□□□□ -0.12
CPNE1-204ENST00000397443 PAM16Q9Y3D7 125 aa14.29□□□□□ -0.12
CPNE1-204ENST00000397443 ZNF22P17026 224 aaPredicted RBP14.28□□□□□ -0.12
CPNE1-204ENST00000397443 CHCHD10Q8WYQ3 142 aaPredicted RBP14.28□□□□□ -0.12
CPNE1-204ENST00000397443 VAMP8Q9BV40 100 aa14.28□□□□□ -0.12
CPNE1-204ENST00000397443 CDKN2A-AS1Q9UH64 79 aa14.27□□□□□ -0.12
CPNE1-204ENST00000397443 IGHV3-64A0A075B6Q5 118 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms