RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 HRCT1Q6UXD1 115 aa6.68□□□□□ -1.34
CAPN3-206ENST00000397163 SDIM1Q6ZPB5 146 aa6.68□□□□□ -1.34
CAPN3-206ENST00000397163 RNF152Q8N8N0 203 aa6.68□□□□□ -1.34
CAPN3-206ENST00000397163 IGHV3-38A0A0C4DH36 116 aa6.68□□□□□ -1.34
CAPN3-206ENST00000397163 J3QKU1 62 aa6.68□□□□□ -1.34
CAPN3-206ENST00000397163 PRM2P04554 102 aa6.68□□□□□ -1.34
CAPN3-206ENST00000397163 ABCA2Q9BZC7 2435 aa6.68□□□□□ -1.34
CAPN3-206ENST00000397163 DOPEY2Q9Y3R5 2298 aa6.67□□□□□ -1.34
CAPN3-206ENST00000397163 OXTP01178 125 aa6.67□□□□□ -1.34
CAPN3-206ENST00000397163 UBE2D4Q9Y2X8 147 aa6.67□□□□□ -1.34
CAPN3-206ENST00000397163 MAP1AP78559 2803 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-206ENST00000397163 RBMY1A1P0DJD3 496 aaKnown RBP6.67□□□□□ -1.34
CAPN3-206ENST00000397163 RBMY1CP0DJD4 496 aa6.67□□□□□ -1.34
CAPN3-206ENST00000397163 PSMB8P28062 276 aa6.67□□□□□ -1.34
CAPN3-206ENST00000397163 DAZ2Q13117 558 aaKnown RBP6.67□□□□□ -1.34
CAPN3-206ENST00000397163 CIRBPQ14011 172 aaKnown RBP6.67□□□□□ -1.34
CAPN3-206ENST00000397163 RBMY1FQ15415 496 aaKnown RBP6.67□□□□□ -1.34
CAPN3-206ENST00000397163 DAZ4Q86SG3 579 aaKnown RBP6.67□□□□□ -1.34
CAPN3-206ENST00000397163 CHCHD7Q9BUK0 85 aa6.67□□□□□ -1.34
CAPN3-206ENST00000397163 DAZ3Q9NR90 486 aaKnown RBP6.67□□□□□ -1.34
CAPN3-206ENST00000397163 CDKN2A-AS1Q9UH64 79 aa6.67□□□□□ -1.34
CAPN3-206ENST00000397163 A0A087WVE0 104 aa6.67□□□□□ -1.34
CAPN3-206ENST00000397163 TRAV25A0A0B4J276 109 aa6.67□□□□□ -1.34
CAPN3-206ENST00000397163 COX7CP15954 63 aa6.67□□□□□ -1.34
CAPN3-206ENST00000397163 DGAT2L7PQ6IED9 249 aa6.67□□□□□ -1.34
CAPN3-206ENST00000397163 LRRC75A-AS1Q8N1F1 130 aa6.67□□□□□ -1.34
CAPN3-206ENST00000397163 LINC00467Q9BRT7 94 aa6.67□□□□□ -1.34
CAPN3-206ENST00000397163 CSPG4Q6UVK1 2322 aa6.66□□□□□ -1.34
CAPN3-206ENST00000397163 IGKV3D-7A0A0C4DH55 119 aa6.66□□□□□ -1.34
CAPN3-206ENST00000397163 C19orf84I3L1E1 186 aa6.66□□□□□ -1.34
CAPN3-206ENST00000397163 PLA2G2AP14555 144 aa6.66□□□□□ -1.34
CAPN3-206ENST00000397163 OR13C6PQ8NH95 151 aa6.66□□□□□ -1.34
CAPN3-206ENST00000397163 Q6ZSN1 163 aa6.66□□□□□ -1.34
CAPN3-206ENST00000397163 TIMM17BO60830 172 aa6.65□□□□□ -1.34
CAPN3-206ENST00000397163 HOXD3P31249 432 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-206ENST00000397163 DEFB121Q5J5C9 76 aa6.65□□□□□ -1.34
CAPN3-206ENST00000397163 LINC00643Q86TS7 51 aa6.65□□□□□ -1.34
CAPN3-206ENST00000397163 C2orf48Q96LS8 159 aa6.65□□□□□ -1.34
CAPN3-206ENST00000397163 Q9HAA7 133 aa6.65□□□□□ -1.34
CAPN3-206ENST00000397163 NDUFA1O15239 70 aa6.65□□□□□ -1.35
CAPN3-206ENST00000397163 DEFB131AP59861 70 aa6.65□□□□□ -1.35
CAPN3-206ENST00000397163 Q8N2B8 174 aa6.65□□□□□ -1.35
CAPN3-206ENST00000397163 Q9H8V8 135 aa6.65□□□□□ -1.35
CAPN3-206ENST00000397163 SPG11Q96JI7 2443 aa6.65□□□□□ -1.35
CAPN3-206ENST00000397163 CRYBG3Q68DQ2 2970 aa6.64□□□□□ -1.35
CAPN3-206ENST00000397163 CITED2Q99967 270 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-206ENST00000397163 IGHV4-59P01825 116 aa6.64□□□□□ -1.35
CAPN3-206ENST00000397163 TRACP01848 142 aa6.64□□□□□ -1.35
CAPN3-206ENST00000397163 MSMBP08118 114 aa6.64□□□□□ -1.35
CAPN3-206ENST00000397163 TIRAPP58753 221 aa6.64□□□□□ -1.35
CAPN3-206ENST00000397163 ZNF415Q09FC8 603 aa6.64□□□□□ -1.35
CAPN3-206ENST00000397163 LINC00308Q8TCZ7 52 aa6.64□□□□□ -1.35
CAPN3-206ENST00000397163 C10orf105Q8TEF2 133 aa6.64□□□□□ -1.35
CAPN3-206ENST00000397163 LRRK2Q5S007 2527 aa6.64□□□□□ -1.35
CAPN3-206ENST00000397163 DOPEY1Q5JWR5 2465 aa6.64□□□□□ -1.35
CAPN3-206ENST00000397163 VPS13CQ709C8 3753 aa6.64□□□□□ -1.35
CAPN3-206ENST00000397163 A0A1B0GX51 115 aa6.63□□□□□ -1.35
CAPN3-206ENST00000397163 F5H768 121 aa6.63□□□□□ -1.35
CAPN3-206ENST00000397163 USP9XQ93008 2570 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-206ENST00000397163 IGHV4-30-2A0A087WSY4 118 aa6.63□□□□□ -1.35
CAPN3-206ENST00000397163 AVPP01185 164 aa6.63□□□□□ -1.35
CAPN3-206ENST00000397163 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-206ENST00000397163 CCL19Q99731 98 aa6.63□□□□□ -1.35
CAPN3-206ENST00000397163 IMUPQ9GZP8 106 aa6.63□□□□□ -1.35
CAPN3-206ENST00000397163 COX7A2LO14548 114 aa6.63□□□□□ -1.35
CAPN3-206ENST00000397163 FLNCQ14315 2725 aa6.62□□□□□ -1.35
CAPN3-206ENST00000397163 ACYP1P07311 99 aa6.62□□□□□ -1.35
CAPN3-206ENST00000397163 BAALC-AS2P0C853 105 aa6.62□□□□□ -1.35
CAPN3-206ENST00000397163 COX6A2Q02221 97 aa6.62□□□□□ -1.35
CAPN3-206ENST00000397163 DPH3Q96FX2 82 aa6.62□□□□□ -1.35
CAPN3-206ENST00000397163 PEMTQ9UBM1 199 aa6.62□□□□□ -1.35
CAPN3-206ENST00000397163 HELZ2Q9BYK8 2649 aaKnown RBP6.62□□□□□ -1.35
CAPN3-206ENST00000397163 FAM218AQ96MZ4 157 aa6.62□□□□□ -1.35
CAPN3-206ENST00000397163 FLNBO75369 2602 aaKnown RBP6.62□□□□□ -1.35
CAPN3-206ENST00000397163 CRYGAP11844 174 aa6.61□□□□□ -1.35
CAPN3-206ENST00000397163 DEFB112Q30KQ8 113 aa6.61□□□□□ -1.35
CAPN3-206ENST00000397163 C9orf129Q5T035 196 aaKnown RBP6.61□□□□□ -1.35
CAPN3-206ENST00000397163 RBMY1BA6NDE4 496 aaKnown RBP6.61□□□□□ -1.35
CAPN3-206ENST00000397163 RBMY1EA6NEQ0 496 aaKnown RBP6.61□□□□□ -1.35
CAPN3-206ENST00000397163 IGHV3-53P01767 116 aa6.61□□□□□ -1.35
CAPN3-206ENST00000397163 RBMY1DP0C7P1 496 aaKnown RBP6.61□□□□□ -1.35
CAPN3-206ENST00000397163 PRIMA1Q86XR5 153 aa6.61□□□□□ -1.35
CAPN3-206ENST00000397163 IGHV3OR16-12A0A075B7B8 117 aa6.6□□□□□ -1.35
CAPN3-206ENST00000397163 IGLV5-45A0A087WSX0 123 aa6.6□□□□□ -1.35
CAPN3-206ENST00000397163 COPS9Q8WXC6 57 aa6.6□□□□□ -1.35
CAPN3-206ENST00000397163 LINC00242Q5T6M2 205 aa6.6□□□□□ -1.35
CAPN3-206ENST00000397163 SOSTDC1Q6X4U4 206 aa6.6□□□□□ -1.35
CAPN3-206ENST00000397163 C5orf38Q86SI9 138 aa6.6□□□□□ -1.35
CAPN3-206ENST00000397163 TMEM89A2RUT3 159 aa6.59□□□□□ -1.35
CAPN3-206ENST00000397163 C14orf132Q9NPU4 83 aa6.59□□□□□ -1.35
CAPN3-206ENST00000397163 UBR5O95071 2799 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-206ENST00000397163 IGLV5-39A0A0G2JS06 123 aa6.59□□□□□ -1.35
CAPN3-206ENST00000397163 B4DSR2 109 aa6.59□□□□□ -1.35
CAPN3-206ENST00000397163 ATOX1O00244 68 aa6.59□□□□□ -1.35
CAPN3-206ENST00000397163 C22orf24Q9Y442 160 aa6.59□□□□□ -1.35
CAPN3-206ENST00000397163 SLURP1P55000 103 aa6.59□□□□□ -1.36
CAPN3-206ENST00000397163 DEFB136Q30KP8 78 aa6.59□□□□□ -1.36
CAPN3-206ENST00000397163 PIK3CD-AS1Q5SR53 167 aa6.59□□□□□ -1.36
CAPN3-206ENST00000397163 Q5XG85 94 aa6.58□□□□□ -1.36
CAPN3-206ENST00000397163 WFDC9Q8NEX5 89 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms