RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 IGHV4-4A0A075B6R2 117 aa11.04□□□□□ -0.64
MCF2L-205ENST00000397017 INSL3P51460 131 aa11.04□□□□□ -0.64
MCF2L-205ENST00000397017 C16orf95Q9H693 158 aa11.04□□□□□ -0.64
MCF2L-205ENST00000397017 C6orf226Q5I0X4 101 aa11.03□□□□□ -0.64
MCF2L-205ENST00000397017 LINC01549A6NIU2 74 aa11.03□□□□□ -0.64
MCF2L-205ENST00000397017 ATP6V0E2Q8NHE4 81 aa11.03□□□□□ -0.64
MCF2L-205ENST00000397017 NDUFA12Q9UI09 145 aa11.03□□□□□ -0.64
MCF2L-205ENST00000397017 A8MZ25 164 aa11.03□□□□□ -0.64
MCF2L-205ENST00000397017 RETNQ9HD89 108 aa11.02□□□□□ -0.65
MCF2L-205ENST00000397017 TRAV26-1A0A087WT03 109 aa11.02□□□□□ -0.65
MCF2L-205ENST00000397017 POLR2KP53803 58 aaKnown RBP11.02□□□□□ -0.65
MCF2L-205ENST00000397017 SEC11AP67812 179 aa11.02□□□□□ -0.65
MCF2L-205ENST00000397017 NBPF19A0A087WUL8 3843 aa11.02□□□□□ -0.65
MCF2L-205ENST00000397017 KLK9Q2XQG4 91 aa11.02□□□□□ -0.65
MCF2L-205ENST00000397017 SAMD5Q5TGI4 173 aa11.02□□□□□ -0.65
MCF2L-205ENST00000397017 CRPP02741 224 aa11.01□□□□□ -0.65
MCF2L-205ENST00000397017 SPART-AS1P0CW21 52 aa11.01□□□□□ -0.65
MCF2L-205ENST00000397017 PLEKHB2Q96CS7 222 aa11.01□□□□□ -0.65
MCF2L-205ENST00000397017 FXYD2P54710 66 aa11.01□□□□□ -0.65
MCF2L-205ENST00000397017 MAPKAPK5-AS1Q8N8E1 139 aa11□□□□□ -0.65
MCF2L-205ENST00000397017 VSIG2Q96IQ7 327 aa11□□□□□ -0.65
MCF2L-205ENST00000397017 PGPEP1Q9NXJ5 209 aa11□□□□□ -0.65
MCF2L-205ENST00000397017 NXPH4O95158 308 aa11□□□□□ -0.65
MCF2L-205ENST00000397017 ATP5G1P05496 136 aa11□□□□□ -0.65
MCF2L-205ENST00000397017 CKS1BP61024 79 aa11□□□□□ -0.65
MCF2L-205ENST00000397017 TSHBP01222 138 aa11□□□□□ -0.65
MCF2L-205ENST00000397017 CFAP161Q6P656 301 aa11□□□□□ -0.65
MCF2L-205ENST00000397017 TRAV4A0A0B4J268 109 aa10.99□□□□□ -0.65
MCF2L-205ENST00000397017 IGHV4-30-4P0DP06 118 aa10.99□□□□□ -0.65
MCF2L-205ENST00000397017 TRBV27A0A0K0K1C4 114 aa10.99□□□□□ -0.65
MCF2L-205ENST00000397017 IGHV3-30P01768 117 aa10.99□□□□□ -0.65
MCF2L-205ENST00000397017 IGHV3-33P01772 117 aa10.99□□□□□ -0.65
MCF2L-205ENST00000397017 IGHV3-30-3P0DP02 117 aa10.99□□□□□ -0.65
MCF2L-205ENST00000397017 IGHV3-30-5P0DP03 117 aa10.99□□□□□ -0.65
MCF2L-205ENST00000397017 FHL3Q13643 280 aa10.99□□□□□ -0.65
MCF2L-205ENST00000397017 IGHV4-28A0A0C4DH34 117 aa10.98□□□□□ -0.65
MCF2L-205ENST00000397017 IGLV4-3A0A075B6K6 122 aa10.97□□□□□ -0.65
MCF2L-205ENST00000397017 FAM19A4Q96LR4 140 aa10.97□□□□□ -0.65
MCF2L-205ENST00000397017 TIMM17AQ99595 171 aa10.97□□□□□ -0.65
MCF2L-205ENST00000397017 UBE2WQ96B02 151 aa10.97□□□□□ -0.65
MCF2L-205ENST00000397017 KRTAP10-3P60369 221 aa10.97□□□□□ -0.65
MCF2L-205ENST00000397017 Q9H8V8 135 aa10.97□□□□□ -0.65
MCF2L-205ENST00000397017 Q9HAA7 133 aa10.97□□□□□ -0.65
MCF2L-205ENST00000397017 DAZ2Q13117 558 aaKnown RBP10.96□□□□□ -0.65
MCF2L-205ENST00000397017 DAZ4Q86SG3 579 aaKnown RBP10.96□□□□□ -0.65
MCF2L-205ENST00000397017 BOD1L2Q8IYS8 172 aa10.96□□□□□ -0.65
MCF2L-205ENST00000397017 SPATA3Q8NHX4 192 aa10.96□□□□□ -0.65
MCF2L-205ENST00000397017 DAZ3Q9NR90 486 aaKnown RBP10.96□□□□□ -0.65
MCF2L-205ENST00000397017 SS18Q15532 418 aa10.96□□□□□ -0.65
MCF2L-205ENST00000397017 SS18L2Q9UHA2 77 aa10.96□□□□□ -0.65
MCF2L-205ENST00000397017 DNAJC30Q96LL9 226 aa10.96□□□□□ -0.66
MCF2L-205ENST00000397017 PRO0255Q9UI72 69 aa10.96□□□□□ -0.66
MCF2L-205ENST00000397017 IGLV2-18A0A075B6J9 118 aa10.95□□□□□ -0.66
MCF2L-205ENST00000397017 SPANXA1Q9NS26 97 aa10.95□□□□□ -0.66
MCF2L-205ENST00000397017 CDKN2A-AS1Q9UH64 79 aa10.95□□□□□ -0.66
MCF2L-205ENST00000397017 KIF25-AS1Q9Y6Z4 181 aa10.95□□□□□ -0.66
MCF2L-205ENST00000397017 RS1O15537 224 aa10.95□□□□□ -0.66
MCF2L-205ENST00000397017 LINC00315P59091 139 aa10.95□□□□□ -0.66
MCF2L-205ENST00000397017 CITED1Q99966 193 aa10.95□□□□□ -0.66
MCF2L-205ENST00000397017 TRAV12-1A0A0B4J245 112 aa10.94□□□□□ -0.66
MCF2L-205ENST00000397017 A0A1B0GWB2 263 aa10.94□□□□□ -0.66
MCF2L-205ENST00000397017 COX6CP09669 75 aa10.94□□□□□ -0.66
MCF2L-205ENST00000397017 KRTAP24-1Q3LI83 254 aa10.94□□□□□ -0.66
MCF2L-205ENST00000397017 CEND1Q8N111 149 aa10.94□□□□□ -0.66
MCF2L-205ENST00000397017 SVIPQ8NHG7 77 aa10.94□□□□□ -0.66
MCF2L-205ENST00000397017 SIGMAR1Q99720 223 aa10.94□□□□□ -0.66
MCF2L-205ENST00000397017 LYRM7Q5U5X0 104 aa10.93□□□□□ -0.66
MCF2L-205ENST00000397017 KLK12Q9UKR0 248 aa10.93□□□□□ -0.66
MCF2L-205ENST00000397017 J3QR89 54 aa10.92□□□□□ -0.66
MCF2L-205ENST00000397017 ERG28Q9UKR5 140 aa10.92□□□□□ -0.66
MCF2L-205ENST00000397017 E9PLD3 99 aa10.92□□□□□ -0.66
MCF2L-205ENST00000397017 LINC00694P0DN24 101 aa10.92□□□□□ -0.66
MCF2L-205ENST00000397017 CRYBA4P53673 196 aa10.92□□□□□ -0.66
MCF2L-205ENST00000397017 SHISA2Q6UWI4 295 aa10.92□□□□□ -0.66
MCF2L-205ENST00000397017 POM121L12Q8N7R1 296 aa10.92□□□□□ -0.66
MCF2L-205ENST00000397017 TRBV6-5A0A0K0K1A5 114 aa10.91□□□□□ -0.66
MCF2L-205ENST00000397017 TRBV10-1A0A0K0K1A3 114 aa10.91□□□□□ -0.66
MCF2L-205ENST00000397017 C11orf72Q8NBR9 251 aa10.91□□□□□ -0.66
MCF2L-205ENST00000397017 HERVK_113P63121 156 aa10.91□□□□□ -0.66
MCF2L-205ENST00000397017 MRPL23Q16540 153 aaKnown RBP10.9□□□□□ -0.66
MCF2L-205ENST00000397017 OTOGQ6ZRI0 2925 aa10.9□□□□□ -0.67
MCF2L-205ENST00000397017 ZNF22P17026 224 aaPredicted RBP10.9□□□□□ -0.67
MCF2L-205ENST00000397017 C12orf74Q32Q52 190 aa10.9□□□□□ -0.67
MCF2L-205ENST00000397017 ZFHX3Q15911 3703 aa10.89□□□□□ -0.67
MCF2L-205ENST00000397017 IGIPA6NJ69 53 aa10.89□□□□□ -0.67
MCF2L-205ENST00000397017 ZNF575Q86XF7 245 aa10.89□□□□□ -0.67
MCF2L-205ENST00000397017 UBE2DNLQ8IWF7 75 aa10.89□□□□□ -0.67
MCF2L-205ENST00000397017 LINC00269Q8N2A0 174 aa10.89□□□□□ -0.67
MCF2L-205ENST00000397017 G3V4G9 280 aa10.88□□□□□ -0.67
MCF2L-205ENST00000397017 BEAN1Q3B7T3 259 aa10.88□□□□□ -0.67
MCF2L-205ENST00000397017 DPH3Q96FX2 82 aa10.88□□□□□ -0.67
MCF2L-205ENST00000397017 C2orf91Q6ZV80 131 aa10.88□□□□□ -0.67
MCF2L-205ENST00000397017 A4D1N5 150 aa10.88□□□□□ -0.67
MCF2L-205ENST00000397017 H3BMG7 143 aa10.88□□□□□ -0.67
MCF2L-205ENST00000397017 MUSTN1Q8IVN3 82 aa10.88□□□□□ -0.67
MCF2L-205ENST00000397017 LINC00526Q96FQ7 95 aa10.87□□□□□ -0.67
MCF2L-205ENST00000397017 ICOSQ9Y6W8 199 aa10.87□□□□□ -0.67
MCF2L-205ENST00000397017 TAX1BP3O14907 124 aa10.87□□□□□ -0.67
MCF2L-205ENST00000397017 LEPROTO15243 131 aa10.87□□□□□ -0.67
MCF2L-205ENST00000397017 VPS13CQ709C8 3753 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms