RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 FAM110AQ9BQ89 295 aa11.84□□□□□ -0.51
TRIM39-205ENST00000396551 TIMM21Q9BVV7 248 aa11.84□□□□□ -0.51
TRIM39-205ENST00000396551 CFC1BP0CG36 223 aa11.84□□□□□ -0.51
TRIM39-205ENST00000396551 CFC1P0CG37 223 aa11.84□□□□□ -0.51
TRIM39-205ENST00000396551 TRAV4A0A0B4J268 109 aa11.84□□□□□ -0.51
TRIM39-205ENST00000396551 K7EQD1 137 aa11.84□□□□□ -0.51
TRIM39-205ENST00000396551 FASNP49327 2511 aaKnown RBP11.84□□□□□ -0.51
TRIM39-205ENST00000396551 CSNK1G2-AS1Q8NCQ2 148 aa11.83□□□□□ -0.52
TRIM39-205ENST00000396551 A0A0J9YXY3 114 aa11.82□□□□□ -0.52
TRIM39-205ENST00000396551 IGHV1-58A0A0C4DH39 117 aa11.82□□□□□ -0.52
TRIM39-205ENST00000396551 DAZ2Q13117 558 aaKnown RBP11.82□□□□□ -0.52
TRIM39-205ENST00000396551 EIF4EBP3O60516 100 aaPredicted RBP11.82□□□□□ -0.52
TRIM39-205ENST00000396551 WFDC2Q14508 124 aa11.82□□□□□ -0.52
TRIM39-205ENST00000396551 NTM-AS1Q6ZSK4 140 aa11.82□□□□□ -0.52
TRIM39-205ENST00000396551 NOTCH3Q9UM47 2321 aa11.81□□□□□ -0.52
TRIM39-205ENST00000396551 A8MZ25 164 aa11.81□□□□□ -0.52
TRIM39-205ENST00000396551 LINC00694P0DN24 101 aa11.81□□□□□ -0.52
TRIM39-205ENST00000396551 TRBV10-1A0A0K0K1A3 114 aa11.81□□□□□ -0.52
TRIM39-205ENST00000396551 SPINK8P0C7L1 97 aa11.81□□□□□ -0.52
TRIM39-205ENST00000396551 SFTA2Q6UW10 78 aa11.81□□□□□ -0.52
TRIM39-205ENST00000396551 PRO0461Q9UI25 63 aa11.81□□□□□ -0.52
TRIM39-205ENST00000396551 RPL36AP83881 106 aaKnown RBP11.81□□□□□ -0.52
TRIM39-205ENST00000396551 RPL36ALQ969Q0 106 aaKnown RBP11.81□□□□□ -0.52
TRIM39-205ENST00000396551 B5MCH6 92 aa11.8□□□□□ -0.52
TRIM39-205ENST00000396551 MTURNQ8N3F0 131 aa11.8□□□□□ -0.52
TRIM39-205ENST00000396551 C16orf74Q96GX8 76 aa11.8□□□□□ -0.52
TRIM39-205ENST00000396551 VSIG2Q96IQ7 327 aa11.8□□□□□ -0.52
TRIM39-205ENST00000396551 LITAFQ99732 161 aa11.8□□□□□ -0.52
TRIM39-205ENST00000396551 F8W1H4 67 aa11.8□□□□□ -0.52
TRIM39-205ENST00000396551 UBE2D3P61077 147 aa11.8□□□□□ -0.52
TRIM39-205ENST00000396551 UBE2D2P62837 147 aa11.8□□□□□ -0.52
TRIM39-205ENST00000396551 MUSTN1Q8IVN3 82 aa11.8□□□□□ -0.52
TRIM39-205ENST00000396551 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.8□□□□□ -0.52
TRIM39-205ENST00000396551 TEX48A0A1B0GUV7 120 aa11.79□□□□□ -0.52
TRIM39-205ENST00000396551 GAGE12JA6NER3 117 aa11.79□□□□□ -0.52
TRIM39-205ENST00000396551 LY6G6DO95868 133 aa11.79□□□□□ -0.52
TRIM39-205ENST00000396551 GAGE4Q13068 117 aa11.79□□□□□ -0.52
TRIM39-205ENST00000396551 GAGE5Q13069 117 aa11.79□□□□□ -0.52
TRIM39-205ENST00000396551 GAGE13Q4V321 117 aa11.79□□□□□ -0.52
TRIM39-205ENST00000396551 M0QXV9 152 aa11.79□□□□□ -0.52
TRIM39-205ENST00000396551 GAGE7O76087 117 aa11.79□□□□□ -0.52
TRIM39-205ENST00000396551 GAGE12FP0CL80 117 aa11.79□□□□□ -0.52
TRIM39-205ENST00000396551 GAGE12GP0CL81 117 aa11.79□□□□□ -0.52
TRIM39-205ENST00000396551 GAGE12IP0CL82 117 aa11.79□□□□□ -0.52
TRIM39-205ENST00000396551 HIVEP2P31629 2446 aa11.78□□□□□ -0.52
TRIM39-205ENST00000396551 SCGB1A1P11684 91 aa11.78□□□□□ -0.52
TRIM39-205ENST00000396551 SBSPONQ8IVN8 264 aa11.78□□□□□ -0.52
TRIM39-205ENST00000396551 CDKN2A-AS1Q9UH64 79 aa11.78□□□□□ -0.52
TRIM39-205ENST00000396551 COX6A2Q02221 97 aa11.78□□□□□ -0.52
TRIM39-205ENST00000396551 DGAT2L7PQ6IED9 249 aa11.78□□□□□ -0.52
TRIM39-205ENST00000396551 DAZ4Q86SG3 579 aaKnown RBP11.77□□□□□ -0.52
TRIM39-205ENST00000396551 DAZ3Q9NR90 486 aaKnown RBP11.77□□□□□ -0.52
TRIM39-205ENST00000396551 NDUFA12Q9UI09 145 aa11.77□□□□□ -0.52
TRIM39-205ENST00000396551 IGLV5-45A0A087WSX0 123 aa11.77□□□□□ -0.53
TRIM39-205ENST00000396551 LOC107984156A0A0G2JMH3 177 aa11.77□□□□□ -0.53
TRIM39-205ENST00000396551 TIRAPP58753 221 aa11.77□□□□□ -0.53
TRIM39-205ENST00000396551 ARL17AQ8IVW1 177 aa11.77□□□□□ -0.53
TRIM39-205ENST00000396551 RNF183Q96D59 192 aa11.77□□□□□ -0.53
TRIM39-205ENST00000396551 OVOL2Q9BRP0 275 aa11.77□□□□□ -0.53
TRIM39-205ENST00000396551 C1QTNF4Q9BXJ3 329 aa11.77□□□□□ -0.53
TRIM39-205ENST00000396551 PRO1854Q9UHT4 67 aa11.77□□□□□ -0.53
TRIM39-205ENST00000396551 GCN1Q92616 2671 aaKnown RBP11.76□□□□□ -0.53
TRIM39-205ENST00000396551 LOC100131303A0A0U1RQF7 123 aa11.76□□□□□ -0.53
TRIM39-205ENST00000396551 ADAMTSL4-AS1Q5T5F5 129 aa11.75□□□□□ -0.53
TRIM39-205ENST00000396551 LINC00482Q8N8I6 264 aa11.75□□□□□ -0.53
TRIM39-205ENST00000396551 TRGV2A0A075B6R0 118 aa11.75□□□□□ -0.53
TRIM39-205ENST00000396551 GAGE12HA6NDE8 117 aa11.75□□□□□ -0.53
TRIM39-205ENST00000396551 SH2D6Q7Z4S9 175 aa11.75□□□□□ -0.53
TRIM39-205ENST00000396551 LINC00242Q5T6M2 205 aa11.75□□□□□ -0.53
TRIM39-205ENST00000396551 PSMB2P49721 201 aa11.74□□□□□ -0.53
TRIM39-205ENST00000396551 ZFAND6Q6FIF0 208 aa11.74□□□□□ -0.53
TRIM39-205ENST00000396551 TMEM101Q96IK0 257 aa11.74□□□□□ -0.53
TRIM39-205ENST00000396551 CSDC2Q9Y534 153 aaKnown RBP11.74□□□□□ -0.53
TRIM39-205ENST00000396551 IGHV3-33P01772 117 aa11.73□□□□□ -0.53
TRIM39-205ENST00000396551 PF4P02776 101 aa11.73□□□□□ -0.53
TRIM39-205ENST00000396551 ETDBQ3ZM63 59 aa11.73□□□□□ -0.53
TRIM39-205ENST00000396551 A0A0B4J2C4 111 aa11.73□□□□□ -0.53
TRIM39-205ENST00000396551 SMCPP49901 116 aaPredicted RBP11.73□□□□□ -0.53
TRIM39-205ENST00000396551 FAM19A3Q7Z5A8 133 aa11.73□□□□□ -0.53
TRIM39-205ENST00000396551 SPATA3Q8NHX4 192 aa11.73□□□□□ -0.53
TRIM39-205ENST00000396551 TCL1BO95988 128 aa11.72□□□□□ -0.53
TRIM39-205ENST00000396551 SPANXDQ9BXN6 97 aa11.72□□□□□ -0.53
TRIM39-205ENST00000396551 SPANXCQ9NY87 97 aa11.72□□□□□ -0.53
TRIM39-205ENST00000396551 TRBV6-4A0A1B0GX49 114 aa11.72□□□□□ -0.53
TRIM39-205ENST00000396551 CDC42SE2Q9NRR3 84 aa11.72□□□□□ -0.53
TRIM39-205ENST00000396551 HECTD1Q9ULT8 2610 aa11.72□□□□□ -0.53
TRIM39-205ENST00000396551 HERVK_113P63121 156 aa11.71□□□□□ -0.54
TRIM39-205ENST00000396551 FHL2Q14192 279 aa11.7□□□□□ -0.54
TRIM39-205ENST00000396551 TRAV13-1A0A0B4J241 112 aa11.7□□□□□ -0.54
TRIM39-205ENST00000396551 IGLV5-39A0A0G2JS06 123 aa11.7□□□□□ -0.54
TRIM39-205ENST00000396551 MIAQ16674 131 aa11.7□□□□□ -0.54
TRIM39-205ENST00000396551 C2CD3Q4AC94 2353 aa11.7□□□□□ -0.54
TRIM39-205ENST00000396551 OTOGQ6ZRI0 2925 aa11.7□□□□□ -0.54
TRIM39-205ENST00000396551 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.69□□□□□ -0.54
TRIM39-205ENST00000396551 TRGV4A0A0C4DH28 118 aa11.69□□□□□ -0.54
TRIM39-205ENST00000396551 LYRM7Q5U5X0 104 aa11.69□□□□□ -0.54
TRIM39-205ENST00000396551 TMEM243Q9BU79 118 aa11.69□□□□□ -0.54
TRIM39-205ENST00000396551 INAFM1C9JVW0 142 aa11.69□□□□□ -0.54
TRIM39-205ENST00000396551 PRSS2P07478 247 aa11.69□□□□□ -0.54
TRIM39-205ENST00000396551 NDUFA1O15239 70 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms