RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 SPATA25Q9BR10 227 aa6.78□□□□□ -1.32
NDE1-201ENST00000396354 TOMM7Q9P0U1 55 aa6.78□□□□□ -1.32
NDE1-201ENST00000396354 A0A0J9YXY3 114 aa6.77□□□□□ -1.33
NDE1-201ENST00000396354 RBMY1BA6NDE4 496 aaKnown RBP6.77□□□□□ -1.33
NDE1-201ENST00000396354 RBMY1EA6NEQ0 496 aaKnown RBP6.77□□□□□ -1.33
NDE1-201ENST00000396354 LGALS9O00182 355 aa6.77□□□□□ -1.33
NDE1-201ENST00000396354 RBMY1DP0C7P1 496 aaKnown RBP6.77□□□□□ -1.33
NDE1-201ENST00000396354 PAPPA-AS1Q5QFB9 102 aa6.77□□□□□ -1.33
NDE1-201ENST00000396354 TIMM17AQ99595 171 aa6.77□□□□□ -1.33
NDE1-201ENST00000396354 CDKN2A-AS1Q9UH64 79 aa6.77□□□□□ -1.33
NDE1-201ENST00000396354 TMEM223A0PJW6 202 aa6.77□□□□□ -1.33
NDE1-201ENST00000396354 HERV-K104P63124 156 aa6.77□□□□□ -1.33
NDE1-201ENST00000396354 TEN1Q86WV5 123 aa6.77□□□□□ -1.33
NDE1-201ENST00000396354 C9orf85Q96MD7 179 aa6.77□□□□□ -1.33
NDE1-201ENST00000396354 CDIP1Q9H305 208 aa6.77□□□□□ -1.33
NDE1-201ENST00000396354 HIVEP1P15822 2718 aa6.77□□□□□ -1.33
NDE1-201ENST00000396354 J3QLI3 93 aa6.76□□□□□ -1.33
NDE1-201ENST00000396354 TRIAP1O43715 76 aa6.76□□□□□ -1.33
NDE1-201ENST00000396354 RPL35AP18077 110 aaKnown RBP6.76□□□□□ -1.33
NDE1-201ENST00000396354 TEP1Q99973 2627 aaKnown RBP6.76□□□□□ -1.33
NDE1-201ENST00000396354 GAGE12JA6NER3 117 aa6.76□□□□□ -1.33
NDE1-201ENST00000396354 IGHV3-33P01772 117 aa6.76□□□□□ -1.33
NDE1-201ENST00000396354 GAGE4Q13068 117 aa6.76□□□□□ -1.33
NDE1-201ENST00000396354 GAGE5Q13069 117 aa6.76□□□□□ -1.33
NDE1-201ENST00000396354 PPDPFLQ8WWR9 84 aa6.76□□□□□ -1.33
NDE1-201ENST00000396354 AMELXQ99217 191 aa6.76□□□□□ -1.33
NDE1-201ENST00000396354 F8P00451 2351 aa6.76□□□□□ -1.33
NDE1-201ENST00000396354 K7EMT4 169 aa6.75□□□□□ -1.33
NDE1-201ENST00000396354 LCE2BO14633 110 aa6.75□□□□□ -1.33
NDE1-201ENST00000396354 TTC32Q5I0X7 151 aa6.75□□□□□ -1.33
NDE1-201ENST00000396354 MEIG1Q5JSS6 88 aa6.75□□□□□ -1.33
NDE1-201ENST00000396354 LYRM7Q5U5X0 104 aa6.75□□□□□ -1.33
NDE1-201ENST00000396354 TRRAPQ9Y4A5 3859 aa6.75□□□□□ -1.33
NDE1-201ENST00000396354 TRGV11A0A075B6L2 103 aa6.75□□□□□ -1.33
NDE1-201ENST00000396354 LEPROTO15243 131 aa6.75□□□□□ -1.33
NDE1-201ENST00000396354 RS1O15537 224 aa6.75□□□□□ -1.33
NDE1-201ENST00000396354 UBE2D3P61077 147 aa6.75□□□□□ -1.33
NDE1-201ENST00000396354 UBE2D2P62837 147 aa6.75□□□□□ -1.33
NDE1-201ENST00000396354 TENM1Q9UKZ4 2725 aa6.75□□□□□ -1.33
NDE1-201ENST00000396354 POM121L12Q8N7R1 296 aa6.74□□□□□ -1.33
NDE1-201ENST00000396354 CRLF1O75462 422 aa6.74□□□□□ -1.33
NDE1-201ENST00000396354 RPL13AP40429 203 aaKnown RBP6.74□□□□□ -1.33
NDE1-201ENST00000396354 C2orf82Q6UX34 121 aa6.74□□□□□ -1.33
NDE1-201ENST00000396354 RNF183Q96D59 192 aa6.74□□□□□ -1.33
NDE1-201ENST00000396354 H3BMM0 161 aa6.74□□□□□ -1.33
NDE1-201ENST00000396354 M0R2P5 195 aa6.74□□□□□ -1.33
NDE1-201ENST00000396354 LINC00694P0DN24 101 aa6.74□□□□□ -1.33
NDE1-201ENST00000396354 MED14OSP0DP75 135 aa6.74□□□□□ -1.33
NDE1-201ENST00000396354 COX6A2Q02221 97 aa6.74□□□□□ -1.33
NDE1-201ENST00000396354 ANAPC13Q9BS18 74 aa6.74□□□□□ -1.33
NDE1-201ENST00000396354 Q9H8V8 135 aa6.74□□□□□ -1.33
NDE1-201ENST00000396354 ESM1Q9NQ30 184 aa6.74□□□□□ -1.33
NDE1-201ENST00000396354 A0A096LPF7 62 aa6.73□□□□□ -1.33
NDE1-201ENST00000396354 NXPH4O95158 308 aa6.73□□□□□ -1.33
NDE1-201ENST00000396354 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.73□□□□□ -1.33
NDE1-201ENST00000396354 SMR3AQ99954 134 aa6.73□□□□□ -1.33
NDE1-201ENST00000396354 KRTAP1-1Q07627 177 aa6.73□□□□□ -1.33
NDE1-201ENST00000396354 Q6ZTI0 123 aa6.73□□□□□ -1.33
NDE1-201ENST00000396354 TMEM263Q8WUH6 116 aaKnown RBP6.73□□□□□ -1.33
NDE1-201ENST00000396354 TRAV4A0A0B4J268 109 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 STHQ8IWL8 128 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 RNF152Q8N8N0 203 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 LOC100131303A0A0U1RQF7 123 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 CYSRT1A8MQ03 144 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 NSUN5P1Q3KNT7 163 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 LINC01620Q4KN68 170 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 CLPSL2Q6UWE3 100 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 NOP10Q9NPE3 64 aaKnown RBP6.72□□□□□ -1.33
NDE1-201ENST00000396354 MAST4O15021 2626 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 TRBV7-9A0A0J9YWB2 115 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 SNCGO76070 127 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 GAGE7O76087 117 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 GAGE12FP0CL80 117 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 GAGE12GP0CL81 117 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 GAGE12IP0CL82 117 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 RHOHQ15669 191 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 MAP6D1Q9H9H5 199 aa6.72□□□□□ -1.33
NDE1-201ENST00000396354 TRGV2A0A075B6R0 118 aa6.71□□□□□ -1.33
NDE1-201ENST00000396354 ZNF415Q09FC8 603 aa6.71□□□□□ -1.33
NDE1-201ENST00000396354 PIK3CD-AS1Q5SR53 167 aa6.71□□□□□ -1.33
NDE1-201ENST00000396354 PRIMA1Q86XR5 153 aa6.71□□□□□ -1.33
NDE1-201ENST00000396354 TEX29Q8N6K0 151 aa6.71□□□□□ -1.33
NDE1-201ENST00000396354 Q8N2B8 174 aa6.71□□□□□ -1.34
NDE1-201ENST00000396354 TRBV6-5A0A0K0K1A5 114 aa6.71□□□□□ -1.34
NDE1-201ENST00000396354 TMEM89A2RUT3 159 aa6.71□□□□□ -1.34
NDE1-201ENST00000396354 B5MCH6 92 aa6.71□□□□□ -1.34
NDE1-201ENST00000396354 LINC01619G3V211 115 aa6.71□□□□□ -1.34
NDE1-201ENST00000396354 ATXN8Q156A1 80 aa6.71□□□□□ -1.34
NDE1-201ENST00000396354 ICOSQ9Y6W8 199 aa6.71□□□□□ -1.34
NDE1-201ENST00000396354 NSD1Q96L73 2696 aaPredicted RBP6.7□□□□□ -1.34
NDE1-201ENST00000396354 IGHV1-58A0A0C4DH39 117 aa6.7□□□□□ -1.34
NDE1-201ENST00000396354 YAE1D1Q9NRH1 226 aa6.7□□□□□ -1.34
NDE1-201ENST00000396354 UBE2D4Q9Y2X8 147 aa6.7□□□□□ -1.34
NDE1-201ENST00000396354 DNAJC9-AS1A6NH13 148 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 DEFB130BP0DP73 79 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 DEFB130AP0DP74 79 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 FAM104AQ969W3 186 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 VSIG2Q96IQ7 327 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 CHCHD7Q9BUK0 85 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 TRAV8-4A0A0B4J246 113 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms