RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 Q6ZUT4 128 aa10.62□□□□□ -0.71
VAMP1-202ENST00000396308 COL7A1Q02388 2944 aa10.61□□□□□ -0.71
VAMP1-202ENST00000396308 A0A1B0GUV1 79 aa10.61□□□□□ -0.71
VAMP1-202ENST00000396308 ESRGQ1W209 222 aa10.61□□□□□ -0.71
VAMP1-202ENST00000396308 UBE2DNLQ8IWF7 75 aa10.61□□□□□ -0.71
VAMP1-202ENST00000396308 ZNF664Q8N3J9 261 aa10.61□□□□□ -0.71
VAMP1-202ENST00000396308 WWC2-AS2Q96NR7 200 aa10.61□□□□□ -0.71
VAMP1-202ENST00000396308 MRPS16Q9Y3D3 137 aaKnown RBP10.61□□□□□ -0.71
VAMP1-202ENST00000396308 CHTOPQ9Y3Y2 248 aaKnown RBP10.61□□□□□ -0.71
VAMP1-202ENST00000396308 PLNP26678 52 aa10.6□□□□□ -0.71
VAMP1-202ENST00000396308 RBX1P62877 108 aa10.6□□□□□ -0.71
VAMP1-202ENST00000396308 LINC01545Q5VT33 79 aa10.6□□□□□ -0.71
VAMP1-202ENST00000396308 CST9LQ9H4G1 147 aa10.6□□□□□ -0.71
VAMP1-202ENST00000396308 PRSS29PA6NIE9 313 aa10.59□□□□□ -0.71
VAMP1-202ENST00000396308 F8VRH5 84 aa10.59□□□□□ -0.71
VAMP1-202ENST00000396308 DPM2O94777 84 aa10.59□□□□□ -0.71
VAMP1-202ENST00000396308 ODF1Q14990 250 aa10.59□□□□□ -0.71
VAMP1-202ENST00000396308 MPV17L2Q567V2 206 aa10.59□□□□□ -0.71
VAMP1-202ENST00000396308 MUC7Q8TAX7 377 aa10.59□□□□□ -0.71
VAMP1-202ENST00000396308 OPRPNQ99935 248 aaPredicted RBP10.59□□□□□ -0.71
VAMP1-202ENST00000396308 CDC42SE2Q9NRR3 84 aa10.59□□□□□ -0.71
VAMP1-202ENST00000396308 HSBP1L1C9JCN9 74 aa10.58□□□□□ -0.72
VAMP1-202ENST00000396308 ANGP03950 147 aaKnown RBP10.58□□□□□ -0.72
VAMP1-202ENST00000396308 SEC11AP67812 179 aa10.58□□□□□ -0.72
VAMP1-202ENST00000396308 RNASE13Q5GAN3 156 aaKnown RBP10.58□□□□□ -0.72
VAMP1-202ENST00000396308 AMELXQ99217 191 aa10.58□□□□□ -0.72
VAMP1-202ENST00000396308 IGKCP01834 107 aa10.57□□□□□ -0.72
VAMP1-202ENST00000396308 S100A12P80511 92 aa10.57□□□□□ -0.72
VAMP1-202ENST00000396308 PYY3Q5JQD4 70 aa10.57□□□□□ -0.72
VAMP1-202ENST00000396308 ZFAND6Q6FIF0 208 aa10.57□□□□□ -0.72
VAMP1-202ENST00000396308 WFDC10BQ8IUB3 73 aa10.57□□□□□ -0.72
VAMP1-202ENST00000396308 Q8N976 141 aa10.57□□□□□ -0.72
VAMP1-202ENST00000396308 APLNQ9ULZ1 77 aa10.57□□□□□ -0.72
VAMP1-202ENST00000396308 CRPP02741 224 aa10.56□□□□□ -0.72
VAMP1-202ENST00000396308 PMCHL2Q9BQD1 86 aa10.56□□□□□ -0.72
VAMP1-202ENST00000396308 GEMIN7Q9H840 131 aaKnown RBP10.56□□□□□ -0.72
VAMP1-202ENST00000396308 MRPL35Q9NZE8 188 aaKnown RBP10.56□□□□□ -0.72
VAMP1-202ENST00000396308 STAB2Q8WWQ8 2551 aa10.55□□□□□ -0.72
VAMP1-202ENST00000396308 IGLV4-60A0A075B6I1 120 aa10.55□□□□□ -0.72
VAMP1-202ENST00000396308 IGKV3OR2-268A0A0C4DH90 116 aa10.55□□□□□ -0.72
VAMP1-202ENST00000396308 SIVA1O15304 175 aa10.55□□□□□ -0.72
VAMP1-202ENST00000396308 IGHV3-30P01768 117 aa10.55□□□□□ -0.72
VAMP1-202ENST00000396308 IGHV3-33P01772 117 aa10.55□□□□□ -0.72
VAMP1-202ENST00000396308 IGHV3-30-3P0DP02 117 aa10.55□□□□□ -0.72
VAMP1-202ENST00000396308 IGHV3-30-5P0DP03 117 aa10.55□□□□□ -0.72
VAMP1-202ENST00000396308 UPK3BQ9BT76 320 aa10.55□□□□□ -0.72
VAMP1-202ENST00000396308 LINC00588Q9Y4M8 146 aa10.55□□□□□ -0.72
VAMP1-202ENST00000396308 HUWE1Q7Z6Z7 4374 aaKnown RBP10.55□□□□□ -0.72
VAMP1-202ENST00000396308 TRAV13-1A0A0B4J241 112 aa10.54□□□□□ -0.72
VAMP1-202ENST00000396308 CCL25O15444 150 aa10.54□□□□□ -0.72
VAMP1-202ENST00000396308 SS18Q15532 418 aa10.54□□□□□ -0.72
VAMP1-202ENST00000396308 LINC01556Q5JQF7 62 aa10.54□□□□□ -0.72
VAMP1-202ENST00000396308 ZC2HC1BQ5TFG8 222 aa10.54□□□□□ -0.72
VAMP1-202ENST00000396308 CHAC1Q9BUX1 264 aa10.54□□□□□ -0.72
VAMP1-202ENST00000396308 VAMP8Q9BV40 100 aa10.54□□□□□ -0.72
VAMP1-202ENST00000396308 TRAV9-2A0A087WT02 112 aa10.53□□□□□ -0.72
VAMP1-202ENST00000396308 IGLC3P0DOY3 106 aa10.53□□□□□ -0.72
VAMP1-202ENST00000396308 UBE2D1P51668 147 aa10.53□□□□□ -0.72
VAMP1-202ENST00000396308 HERVK_113P61574 105 aa10.53□□□□□ -0.72
VAMP1-202ENST00000396308 HERVK_113P63121 156 aa10.53□□□□□ -0.72
VAMP1-202ENST00000396308 ATOH7Q8N100 152 aa10.53□□□□□ -0.72
VAMP1-202ENST00000396308 TINCRA0A1B0GVN0 87 aa10.52□□□□□ -0.73
VAMP1-202ENST00000396308 DNAH10OSP0CZ25 163 aa10.52□□□□□ -0.73
VAMP1-202ENST00000396308 REG3AQ06141 175 aa10.52□□□□□ -0.73
VAMP1-202ENST00000396308 LINC00269Q8N2A0 174 aa10.52□□□□□ -0.73
VAMP1-202ENST00000396308 C10orf126Q8N4M7 172 aa10.52□□□□□ -0.73
VAMP1-202ENST00000396308 C12orf57Q99622 126 aa10.52□□□□□ -0.73
VAMP1-202ENST00000396308 KLK12Q9UKR0 248 aa10.52□□□□□ -0.73
VAMP1-202ENST00000396308 DNAH9Q9NYC9 4486 aa10.52□□□□□ -0.73
VAMP1-202ENST00000396308 A0A0J9YXV3 536 aa10.51□□□□□ -0.73
VAMP1-202ENST00000396308 H3BRM9 83 aa10.51□□□□□ -0.73
VAMP1-202ENST00000396308 TMEM170BQ5T4T1 132 aa10.51□□□□□ -0.73
VAMP1-202ENST00000396308 CLPSL2Q6UWE3 100 aa10.51□□□□□ -0.73
VAMP1-202ENST00000396308 NFE4Q86UQ8 179 aa10.51□□□□□ -0.73
VAMP1-202ENST00000396308 FAM104AQ969W3 186 aa10.51□□□□□ -0.73
VAMP1-202ENST00000396308 IGLV4-69A0A075B6H9 119 aa10.5□□□□□ -0.73
VAMP1-202ENST00000396308 K7EP13 123 aa10.5□□□□□ -0.73
VAMP1-202ENST00000396308 LINC00469Q8N7U9 141 aa10.5□□□□□ -0.73
VAMP1-202ENST00000396308 LINC00959A0A1B0GUT2 108 aa10.49□□□□□ -0.73
VAMP1-202ENST00000396308 C11orf86A6NJI1 115 aa10.49□□□□□ -0.73
VAMP1-202ENST00000396308 C3orf84H3BNL1 204 aa10.49□□□□□ -0.73
VAMP1-202ENST00000396308 Q8N3U1 123 aa10.49□□□□□ -0.73
VAMP1-202ENST00000396308 TRAV8-4A0A0B4J246 113 aa10.48□□□□□ -0.73
VAMP1-202ENST00000396308 MIAQ16674 131 aa10.48□□□□□ -0.73
VAMP1-202ENST00000396308 FAM19A3Q7Z5A8 133 aa10.48□□□□□ -0.73
VAMP1-202ENST00000396308 UBE2WQ96B02 151 aa10.48□□□□□ -0.73
VAMP1-202ENST00000396308 Q9H8V8 135 aa10.48□□□□□ -0.73
VAMP1-202ENST00000396308 PAM16Q9Y3D7 125 aa10.48□□□□□ -0.73
VAMP1-202ENST00000396308 LINC00242Q5T6M2 205 aa10.47□□□□□ -0.73
VAMP1-202ENST00000396308 LINC00518Q8N0U6 118 aa10.47□□□□□ -0.73
VAMP1-202ENST00000396308 PRR34Q9NV39 138 aa10.47□□□□□ -0.73
VAMP1-202ENST00000396308 hDV102S1A0JD36 115 aa10.46□□□□□ -0.73
VAMP1-202ENST00000396308 ZNF22P17026 224 aaPredicted RBP10.46□□□□□ -0.73
VAMP1-202ENST00000396308 SPATA45Q537H7 98 aa10.46□□□□□ -0.73
VAMP1-202ENST00000396308 TTC32Q5I0X7 151 aa10.46□□□□□ -0.73
VAMP1-202ENST00000396308 RMI2Q96E14 147 aa10.46□□□□□ -0.73
VAMP1-202ENST00000396308 TRAV8-3A0A0A6YYJ7 113 aa10.45□□□□□ -0.74
VAMP1-202ENST00000396308 XCL1P47992 114 aa10.45□□□□□ -0.74
VAMP1-202ENST00000396308 KMT2CQ8NEZ4 4911 aaKnown RBP10.44□□□□□ -0.74
VAMP1-202ENST00000396308 IGLV5-45A0A087WSX0 123 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms