RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 C1orf64Q8NEQ6 169 aa2.54□□□□□ -2
XRCC4-203ENST00000396027 ZNF625Q96I27 306 aaPredicted RBP2.54□□□□□ -2
XRCC4-203ENST00000396027 RETNLBQ9BQ08 111 aa2.54□□□□□ -2
XRCC4-203ENST00000396027 CDC42SE2Q9NRR3 84 aa2.54□□□□□ -2
XRCC4-203ENST00000396027 LTBP2Q14767 1821 aa2.54□□□□□ -2
XRCC4-203ENST00000396027 FREM1Q5H8C1 2179 aa2.54□□□□□ -2
XRCC4-203ENST00000396027 TET2Q6N021 2002 aaPredicted RBP2.54□□□□□ -2
XRCC4-203ENST00000396027 IGHV6-1A0A0B4J1U7 121 aa2.53□□□□□ -2
XRCC4-203ENST00000396027 A6NED7 52 aa2.53□□□□□ -2
XRCC4-203ENST00000396027 IGLV3-19P01714 112 aa2.53□□□□□ -2
XRCC4-203ENST00000396027 RPL39P5Q59GN2 51 aa2.53□□□□□ -2
XRCC4-203ENST00000396027 C17orf82Q86X59 251 aaPredicted RBP2.53□□□□□ -2
XRCC4-203ENST00000396027 SPTSSBQ8NFR3 76 aa2.53□□□□□ -2
XRCC4-203ENST00000396027 DEFB126Q9BYW3 111 aa2.53□□□□□ -2
XRCC4-203ENST00000396027 OCR1Q9BZK8 76 aa2.53□□□□□ -2
XRCC4-203ENST00000396027 MSRB1Q9NZV6 116 aa2.53□□□□□ -2
XRCC4-203ENST00000396027 C22orf24Q9Y442 160 aa2.53□□□□□ -2
XRCC4-203ENST00000396027 KNTC1P50748 2209 aa2.53□□□□□ -2
XRCC4-203ENST00000396027 DIDO1Q9BTC0 2240 aaKnown RBP2.53□□□□□ -2
XRCC4-203ENST00000396027 UTRNP46939 3433 aa2.53□□□□□ -2
XRCC4-203ENST00000396027 IGLV4-3A0A075B6K6 122 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 C16orf90A8MZG2 172 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 I3L2K1 104 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 SPRY3O43610 288 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 IGKV1-17P01599 117 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 IGHV4-38-2P0DP08 117 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 LINC00313P59037 77 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 HAMPP81172 84 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 Q5VV11 94 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 Q6ZQT0 140 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 Q8N814 137 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 HIGD2AQ9BW72 106 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 FGF23Q9GZV9 251 aaPredicted RBP2.52□□□□□ -2.01
XRCC4-203ENST00000396027 ARRDC1-AS1Q9H2J1 176 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 ZNF580Q9UK33 172 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 KLK9Q9UKQ9 250 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 ARFGEF3Q5TH69 2177 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 ARHGAP32A7KAX9 2087 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 DEFB108AA8MXU0 73 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 K7EIM0 57 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 LY6G6DO95868 133 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 LHBP01229 141 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 IGKV1-16P04430 117 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 IGHV4-31P0DP07 118 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 C6orf99Q4VX62 202 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 NTM-AS1Q6ZSK4 140 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 SND1-IT1Q9HBX3 110 aa2.52□□□□□ -2.01
XRCC4-203ENST00000396027 RP1P56715 2156 aa2.51□□□□□ -2.01
XRCC4-203ENST00000396027 ZNF407Q9C0G0 2248 aa2.51□□□□□ -2.01
XRCC4-203ENST00000396027 PCNTO95613 3336 aa2.51□□□□□ -2.01
XRCC4-203ENST00000396027 IGHV3-43A0A0B4J1X8 118 aa2.51□□□□□ -2.01
XRCC4-203ENST00000396027 IGHV1-3A0A0C4DH29 117 aa2.51□□□□□ -2.01
XRCC4-203ENST00000396027 A0A0J9YXV3 536 aa2.51□□□□□ -2.01
XRCC4-203ENST00000396027 C5orf67F2Z3F1 127 aa2.51□□□□□ -2.01
XRCC4-203ENST00000396027 LECT2O14960 151 aa2.51□□□□□ -2.01
XRCC4-203ENST00000396027 MGPP08493 103 aa2.51□□□□□ -2.01
XRCC4-203ENST00000396027 IGHV3-43DP0DP04 118 aa2.51□□□□□ -2.01
XRCC4-203ENST00000396027 RPL36AP83881 106 aaKnown RBP2.51□□□□□ -2.01
XRCC4-203ENST00000396027 COX17Q14061 63 aa2.51□□□□□ -2.01
XRCC4-203ENST00000396027 C17orf58Q2M2W7 97 aa2.51□□□□□ -2.01
XRCC4-203ENST00000396027 KLK9Q2XQG4 91 aa2.51□□□□□ -2.01
XRCC4-203ENST00000396027 HCP5Q6MZN7 132 aa2.51□□□□□ -2.01
XRCC4-203ENST00000396027 RPL36ALQ969Q0 106 aaKnown RBP2.51□□□□□ -2.01
XRCC4-203ENST00000396027 LINC00208Q96KT6 92 aa2.51□□□□□ -2.01
XRCC4-203ENST00000396027 ZGRF1Q86YA3 2104 aa2.5□□□□□ -2.01
XRCC4-203ENST00000396027 DNAH12Q6ZR08 3092 aa2.5□□□□□ -2.01
XRCC4-203ENST00000396027 NOTCH4Q99466 2003 aa2.5□□□□□ -2.01
XRCC4-203ENST00000396027 IGHV1OR15-1A0A075B7D0 117 aa2.5□□□□□ -2.01
XRCC4-203ENST00000396027 IGKV2-40A0A087WW87 121 aaPredicted RBP2.5□□□□□ -2.01
XRCC4-203ENST00000396027 F5H697 171 aa2.5□□□□□ -2.01
XRCC4-203ENST00000396027 CCL24O00175 119 aa2.5□□□□□ -2.01
XRCC4-203ENST00000396027 NCR3O14931 201 aa2.5□□□□□ -2.01
XRCC4-203ENST00000396027 IGKV2D-40P01614 121 aaPredicted RBP2.5□□□□□ -2.01
XRCC4-203ENST00000396027 PLA2G5P39877 138 aa2.5□□□□□ -2.01
XRCC4-203ENST00000396027 B3GALT5-AS1P59052 145 aa2.5□□□□□ -2.01
XRCC4-203ENST00000396027 FAM229BQ4G0N7 80 aa2.5□□□□□ -2.01
XRCC4-203ENST00000396027 ATP1A1-AS1Q5TC04 95 aa2.5□□□□□ -2.01
XRCC4-203ENST00000396027 C11orf72Q8NBR9 251 aa2.5□□□□□ -2.01
XRCC4-203ENST00000396027 SMIM11BQ8TCY0 68 aa2.5□□□□□ -2.01
XRCC4-203ENST00000396027 B9D2Q9BPU9 175 aa2.5□□□□□ -2.01
XRCC4-203ENST00000396027 TNCP24821 2201 aa2.5□□□□□ -2.01
XRCC4-203ENST00000396027 IGHV3-49A0A0A0MS15 119 aa2.49□□□□□ -2.01
XRCC4-203ENST00000396027 IGHV3-16A0A0C4DH30 117 aa2.49□□□□□ -2.01
XRCC4-203ENST00000396027 TRBV10-1A0A0K0K1A3 114 aa2.49□□□□□ -2.01
XRCC4-203ENST00000396027 ETDCA0A1B0GVM5 59 aa2.49□□□□□ -2.01
XRCC4-203ENST00000396027 TRBV6-4A0A1B0GX49 114 aa2.49□□□□□ -2.01
XRCC4-203ENST00000396027 M0QY20 66 aa2.49□□□□□ -2.01
XRCC4-203ENST00000396027 GAS8-AS1O95177 125 aa2.49□□□□□ -2.01
XRCC4-203ENST00000396027 IGLV2-23P01705 113 aa2.49□□□□□ -2.01
XRCC4-203ENST00000396027 CCL5P13501 91 aa2.49□□□□□ -2.01
XRCC4-203ENST00000396027 COX7BP24311 80 aa2.49□□□□□ -2.01
XRCC4-203ENST00000396027 LINC00205P59089 165 aa2.49□□□□□ -2.01
XRCC4-203ENST00000396027 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.49□□□□□ -2.01
XRCC4-203ENST00000396027 ZNF843Q8N446 348 aa2.49□□□□□ -2.01
XRCC4-203ENST00000396027 ZCCHC13Q8WW36 166 aaKnown RBP2.49□□□□□ -2.01
XRCC4-203ENST00000396027 RPL39LQ96EH5 51 aaKnown RBP2.49□□□□□ -2.01
XRCC4-203ENST00000396027 FAM218AQ96MZ4 157 aa2.49□□□□□ -2.01
XRCC4-203ENST00000396027 RTTNQ86VV8 2226 aa2.49□□□□□ -2.01
XRCC4-203ENST00000396027 IGHV3-73A0A0B4J1V6 119 aa2.48□□□□□ -2.01
XRCC4-203ENST00000396027 TRAV10A0A0B4J240 114 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms