RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 LINC01590Q5TEZ4 76 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 ORMDL3Q8N138 153 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 Q8NDZ9 215 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 TIMM9Q9Y5J7 89 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 ADAMTS9Q9P2N4 1935 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 TRAV22A0A0B4J277 110 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 CCL3L1P16619 93 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 ROMO1P60602 79 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 C20orf197Q8N268 126 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 IGLV5-37A0A075B6J1 123 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 IGHV3-35A0A0C4DH35 117 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 H3BMM0 161 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 CFC1BP0CG36 223 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 Q5VV11 94 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 UBE2WQ96B02 151 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 WWC2-AS2Q96NR7 200 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 HCG22E2RYF7 251 aa2.91□□□□□ -1.94
HERC4-204ENST00000395198 IGHV1-46P01743 117 aa2.91□□□□□ -1.94
HERC4-204ENST00000395198 C9orf66Q5T8R8 295 aa2.91□□□□□ -1.94
HERC4-204ENST00000395198 HCP5Q6MZN7 132 aa2.91□□□□□ -1.94
HERC4-204ENST00000395198 Q6ZR03 302 aa2.91□□□□□ -1.94
HERC4-204ENST00000395198 SPTSSBQ8NFR3 76 aa2.91□□□□□ -1.94
HERC4-204ENST00000395198 PKD1L2Q7Z442 2459 aa2.91□□□□□ -1.94
HERC4-204ENST00000395198 CEP350Q5VT06 3117 aa2.91□□□□□ -1.94
HERC4-204ENST00000395198 SRRM5B3KS81 715 aa2.91□□□□□ -1.94
HERC4-204ENST00000395198 ARTNQ5T4W7 220 aa2.91□□□□□ -1.94
HERC4-204ENST00000395198 VMO1Q7Z5L0 202 aa2.91□□□□□ -1.94
HERC4-204ENST00000395198 PRUNE2Q8WUY3 3088 aa2.91□□□□□ -1.94
HERC4-204ENST00000395198 A0A1W2PNU3 283 aaPredicted RBP2.91□□□□□ -1.94
HERC4-204ENST00000395198 P0C880 135 aa2.91□□□□□ -1.94
HERC4-204ENST00000395198 SAA1P0DJI8 122 aaPredicted RBP2.91□□□□□ -1.94
HERC4-204ENST00000395198 NPPCP23582 126 aa2.91□□□□□ -1.94
HERC4-204ENST00000395198 CD24P25063 80 aa2.91□□□□□ -1.94
HERC4-204ENST00000395198 BRD3OSQ6XYD6 125 aa2.91□□□□□ -1.94
HERC4-204ENST00000395198 C2CD3Q4AC94 2353 aa2.9□□□□□ -1.94
HERC4-204ENST00000395198 A8MWP4 228 aa2.9□□□□□ -1.94
HERC4-204ENST00000395198 F8WEM9 126 aa2.9□□□□□ -1.94
HERC4-204ENST00000395198 LUZP6Q538Z0 58 aa2.9□□□□□ -1.94
HERC4-204ENST00000395198 FAM215AQ9Y5M1 114 aa2.9□□□□□ -1.94
HERC4-204ENST00000395198 IGHV3-74A0A0B4J1X5 117 aa2.9□□□□□ -1.94
HERC4-204ENST00000395198 LHBP01229 141 aa2.9□□□□□ -1.94
HERC4-204ENST00000395198 IGKV1D-33P01593 117 aa2.9□□□□□ -1.94
HERC4-204ENST00000395198 IGKV1-33P01594 117 aa2.9□□□□□ -1.94
HERC4-204ENST00000395198 TRGV3P03979 118 aa2.9□□□□□ -1.94
HERC4-204ENST00000395198 IL4P05112 153 aa2.9□□□□□ -1.94
HERC4-204ENST00000395198 FXYD3Q14802 87 aa2.9□□□□□ -1.94
HERC4-204ENST00000395198 C1orf134Q5TEV5 83 aa2.9□□□□□ -1.94
HERC4-204ENST00000395198 OCR1Q9BZK8 76 aa2.9□□□□□ -1.94
HERC4-204ENST00000395198 A0A0J9YXY3 114 aa2.9□□□□□ -1.95
HERC4-204ENST00000395198 RPL36AP83881 106 aaKnown RBP2.9□□□□□ -1.95
HERC4-204ENST00000395198 MOBPQ13875 183 aa2.9□□□□□ -1.95
HERC4-204ENST00000395198 C1orf64Q8NEQ6 169 aa2.9□□□□□ -1.95
HERC4-204ENST00000395198 TMEM141Q96I45 108 aa2.9□□□□□ -1.95
HERC4-204ENST00000395198 CYSRT1A8MQ03 144 aa2.9□□□□□ -1.95
HERC4-204ENST00000395198 IGHV3-11P01762 117 aa2.9□□□□□ -1.95
HERC4-204ENST00000395198 CLPSP04118 112 aa2.9□□□□□ -1.95
HERC4-204ENST00000395198 RNASE13Q5GAN3 156 aaKnown RBP2.9□□□□□ -1.95
HERC4-204ENST00000395198 CASC10Q5T4H9 136 aa2.9□□□□□ -1.95
HERC4-204ENST00000395198 LCE2DQ5TA82 110 aaPredicted RBP2.9□□□□□ -1.95
HERC4-204ENST00000395198 SCGB3A1Q96QR1 104 aa2.9□□□□□ -1.95
HERC4-204ENST00000395198 SMIM7Q9BQ49 75 aa2.9□□□□□ -1.95
HERC4-204ENST00000395198 ACANP16112 2415 aa2.9□□□□□ -1.95
HERC4-204ENST00000395198 H3BUX3 64 aa2.89□□□□□ -1.95
HERC4-204ENST00000395198 VPS13CQ709C8 3753 aa2.89□□□□□ -1.95
HERC4-204ENST00000395198 NDUFC1O43677 76 aa2.89□□□□□ -1.95
HERC4-204ENST00000395198 PRSS1P07477 247 aa2.89□□□□□ -1.95
HERC4-204ENST00000395198 MSMBP08118 114 aa2.89□□□□□ -1.95
HERC4-204ENST00000395198 IGHV3-30-3P0DP02 117 aa2.89□□□□□ -1.95
HERC4-204ENST00000395198 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.89□□□□□ -1.95
HERC4-204ENST00000395198 GNG13Q9P2W3 67 aa2.89□□□□□ -1.95
HERC4-204ENST00000395198 ADAMTS20P59510 1910 aa2.89□□□□□ -1.95
HERC4-204ENST00000395198 TRBV7-3A0A075B6L6 115 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 TRAV3A0A0B4J244 114 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 MIFP14174 115 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 RPL28P46779 137 aaKnown RBP2.88□□□□□ -1.95
HERC4-204ENST00000395198 RPL39P5Q59GN2 51 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 IGHV3-49A0A0A0MS15 119 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 SDHAF1A6NFY7 115 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 ZNF137PP52743 207 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 NPBQ8NG41 125 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 C7orf33Q8WU49 177 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 SMAD5-AS1Q9Y6J3 95 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 S4R3C0 116 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 TRBV25-1A0A075B6N4 114 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 PIN1P1O15428 100 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 IGKV3-15P01624 115 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 BAALC-AS2P0C853 105 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 SLURP1P55000 103 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 LYZL2Q7Z4W2 148 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 PRSS3P2Q8NHM4 247 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 HECTD1Q9ULT8 2610 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 IGHV3OR16-8A0A075B7F1 116 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 SOCS3O14543 225 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 PRSS2P07478 247 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 ASB16-AS1Q495Z4 193 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 Q6ZTC4 211 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 Q8N6K4 173 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 C1orf147Q96MC9 270 aaPredicted RBP2.88□□□□□ -1.95
HERC4-204ENST00000395198 ARHGAP32A7KAX9 2087 aa2.88□□□□□ -1.95
HERC4-204ENST00000395198 UBE2D1P51668 147 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms