RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 C16orf95Q9H693 158 aa8.83□□□□□ -1
RFC5-201ENST00000392542 IGLV5-45A0A087WSX0 123 aa8.82□□□□□ -1
RFC5-201ENST00000392542 TRAV4A0A0B4J268 109 aa8.82□□□□□ -1
RFC5-201ENST00000392542 TRBV10-1A0A0K0K1A3 114 aa8.82□□□□□ -1
RFC5-201ENST00000392542 A8MZ25 164 aa8.82□□□□□ -1
RFC5-201ENST00000392542 CMC4P56277 68 aaPredicted RBP8.82□□□□□ -1
RFC5-201ENST00000392542 RPL36AP83881 106 aaKnown RBP8.82□□□□□ -1
RFC5-201ENST00000392542 HIST2H2BCQ6DN03 193 aa8.82□□□□□ -1
RFC5-201ENST00000392542 Q6ZTI0 123 aa8.82□□□□□ -1
RFC5-201ENST00000392542 LINC01006Q8NI28 216 aa8.82□□□□□ -1
RFC5-201ENST00000392542 RPL36ALQ969Q0 106 aaKnown RBP8.82□□□□□ -1
RFC5-201ENST00000392542 RNASE1P07998 156 aaKnown RBP8.82□□□□□ -1
RFC5-201ENST00000392542 MIAQ16674 131 aa8.81□□□□□ -1
RFC5-201ENST00000392542 ADAMTSL4-AS1Q5T5F5 129 aa8.81□□□□□ -1
RFC5-201ENST00000392542 SIGMAR1Q99720 223 aa8.81□□□□□ -1
RFC5-201ENST00000392542 CDKN2A-AS1Q9UH64 79 aa8.81□□□□□ -1
RFC5-201ENST00000392542 NF1P21359 2839 aa8.81□□□□□ -1
RFC5-201ENST00000392542 H7C2G1 150 aa8.81□□□□□ -1
RFC5-201ENST00000392542 YAE1D1Q9NRH1 226 aa8.81□□□□□ -1
RFC5-201ENST00000392542 PRSS2P07478 247 aa8.8□□□□□ -1
RFC5-201ENST00000392542 DAZ2Q13117 558 aaKnown RBP8.8□□□□□ -1
RFC5-201ENST00000392542 DAZ4Q86SG3 579 aaKnown RBP8.8□□□□□ -1
RFC5-201ENST00000392542 TEN1Q86WV5 123 aa8.8□□□□□ -1
RFC5-201ENST00000392542 GTSF1LQ9H1H1 148 aa8.8□□□□□ -1
RFC5-201ENST00000392542 DAZ3Q9NR90 486 aaKnown RBP8.8□□□□□ -1
RFC5-201ENST00000392542 TIMM17BO60830 172 aa8.8□□□□□ -1
RFC5-201ENST00000392542 GIG44P09565 113 aaPredicted RBP8.8□□□□□ -1
RFC5-201ENST00000392542 Q1RN00 199 aa8.8□□□□□ -1
RFC5-201ENST00000392542 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.8□□□□□ -1
RFC5-201ENST00000392542 TMEM101Q96IK0 257 aa8.8□□□□□ -1
RFC5-201ENST00000392542 LINC00694P0DN24 101 aa8.79□□□□□ -1
RFC5-201ENST00000392542 HERVK_113P63121 156 aa8.79□□□□□ -1
RFC5-201ENST00000392542 COX6A2Q02221 97 aa8.79□□□□□ -1
RFC5-201ENST00000392542 NTM-AS1Q6ZSK4 140 aa8.79□□□□□ -1
RFC5-201ENST00000392542 FAM19A3Q7Z5A8 133 aa8.79□□□□□ -1
RFC5-201ENST00000392542 NOP10Q9NPE3 64 aaKnown RBP8.79□□□□□ -1
RFC5-201ENST00000392542 CSDC2Q9Y534 153 aaKnown RBP8.79□□□□□ -1
RFC5-201ENST00000392542 CCDC168Q8NDH2 2452 aa8.79□□□□□ -1
RFC5-201ENST00000392542 NDUFA1O15239 70 aa8.79□□□□□ -1
RFC5-201ENST00000392542 PPDPFLQ8WWR9 84 aa8.79□□□□□ -1
RFC5-201ENST00000392542 FAM110AQ9BQ89 295 aa8.79□□□□□ -1
RFC5-201ENST00000392542 GAGE12JA6NER3 117 aa8.78□□□□□ -1
RFC5-201ENST00000392542 IGLV1-51P01701 117 aa8.78□□□□□ -1
RFC5-201ENST00000392542 GAGE4Q13068 117 aa8.78□□□□□ -1
RFC5-201ENST00000392542 GAGE5Q13069 117 aa8.78□□□□□ -1
RFC5-201ENST00000392542 LINC00242Q5T6M2 205 aa8.78□□□□□ -1
RFC5-201ENST00000392542 C16orf74Q96GX8 76 aa8.78□□□□□ -1
RFC5-201ENST00000392542 CARD19Q96LW7 228 aa8.78□□□□□ -1
RFC5-201ENST00000392542 WFDC10AQ9H1F0 79 aa8.78□□□□□ -1
RFC5-201ENST00000392542 CUBNO60494 3623 aa8.78□□□□□ -1
RFC5-201ENST00000392542 IGLV5-39A0A0G2JS06 123 aa8.78□□□□□ -1
RFC5-201ENST00000392542 TRBV30A0A0K0K1B3 111 aa8.78□□□□□ -1
RFC5-201ENST00000392542 RNF183Q96D59 192 aa8.78□□□□□ -1
RFC5-201ENST00000392542 C19orf73Q9NVV2 129 aa8.78□□□□□ -1
RFC5-201ENST00000392542 PLAC8L1A1L4L8 177 aa8.77□□□□□ -1.01
RFC5-201ENST00000392542 M0QXV9 152 aa8.77□□□□□ -1.01
RFC5-201ENST00000392542 SLC25A20O43772 301 aa8.77□□□□□ -1.01
RFC5-201ENST00000392542 SCGB1A1P11684 91 aa8.77□□□□□ -1.01
RFC5-201ENST00000392542 IFITM1P13164 125 aa8.77□□□□□ -1.01
RFC5-201ENST00000392542 SMAGPQ0VAQ4 97 aa8.77□□□□□ -1.01
RFC5-201ENST00000392542 TENM4Q6N022 2769 aa8.77□□□□□ -1.01
RFC5-201ENST00000392542 C9JAW5 83 aa8.76□□□□□ -1.01
RFC5-201ENST00000392542 RPL35AP18077 110 aaKnown RBP8.76□□□□□ -1.01
RFC5-201ENST00000392542 NPC2P61916 151 aa8.76□□□□□ -1.01
RFC5-201ENST00000392542 ANKRD29Q8N6D5 301 aa8.76□□□□□ -1.01
RFC5-201ENST00000392542 PDZD2O15018 2839 aa8.76□□□□□ -1.01
RFC5-201ENST00000392542 TRIAP1O43715 76 aa8.76□□□□□ -1.01
RFC5-201ENST00000392542 ATXN8Q156A1 80 aa8.76□□□□□ -1.01
RFC5-201ENST00000392542 NDUFA7O95182 113 aa8.75□□□□□ -1.01
RFC5-201ENST00000392542 CDC42SE2Q9NRR3 84 aa8.75□□□□□ -1.01
RFC5-201ENST00000392542 SETXQ7Z333 2677 aaKnown RBP8.75□□□□□ -1.01
RFC5-201ENST00000392542 GAGE7O76087 117 aa8.75□□□□□ -1.01
RFC5-201ENST00000392542 GAGE12FP0CL80 117 aa8.75□□□□□ -1.01
RFC5-201ENST00000392542 GAGE12GP0CL81 117 aa8.75□□□□□ -1.01
RFC5-201ENST00000392542 GAGE12IP0CL82 117 aa8.75□□□□□ -1.01
RFC5-201ENST00000392542 ICOSQ9Y6W8 199 aa8.75□□□□□ -1.01
RFC5-201ENST00000392542 TRGV2A0A075B6R0 118 aa8.74□□□□□ -1.01
RFC5-201ENST00000392542 SMIM1B2RUZ4 78 aa8.74□□□□□ -1.01
RFC5-201ENST00000392542 CIDEAO60543 219 aa8.74□□□□□ -1.01
RFC5-201ENST00000392542 CSNK1G2-AS1Q8NCQ2 148 aa8.74□□□□□ -1.01
RFC5-201ENST00000392542 OVOL2Q9BRP0 275 aa8.74□□□□□ -1.01
RFC5-201ENST00000392542 TRAV13-1A0A0B4J241 112 aa8.74□□□□□ -1.01
RFC5-201ENST00000392542 CIRBPQ14011 172 aaKnown RBP8.74□□□□□ -1.01
RFC5-201ENST00000392542 LINC01620Q4KN68 170 aa8.74□□□□□ -1.01
RFC5-201ENST00000392542 TMEM243Q9BU79 118 aa8.74□□□□□ -1.01
RFC5-201ENST00000392542 CDIP1Q9H305 208 aa8.74□□□□□ -1.01
RFC5-201ENST00000392542 Q9H8V8 135 aa8.74□□□□□ -1.01
RFC5-201ENST00000392542 TRBV6-4A0A1B0GX49 114 aa8.73□□□□□ -1.01
RFC5-201ENST00000392542 DAND5Q8N907 189 aa8.73□□□□□ -1.01
RFC5-201ENST00000392542 UBE2L6O14933 153 aa8.73□□□□□ -1.01
RFC5-201ENST00000392542 HILS1P60008 231 aa8.73□□□□□ -1.01
RFC5-201ENST00000392542 SETD2Q9BYW2 2564 aaPredicted RBP8.73□□□□□ -1.01
RFC5-201ENST00000392542 JMJD1CQ15652 2540 aa8.72□□□□□ -1.01
RFC5-201ENST00000392542 LINC01600Q96MT4 127 aa8.72□□□□□ -1.01
RFC5-201ENST00000392542 ACANP16112 2415 aa8.72□□□□□ -1.01
RFC5-201ENST00000392542 LOC100131303A0A0U1RQF7 123 aa8.72□□□□□ -1.01
RFC5-201ENST00000392542 F5H768 121 aa8.72□□□□□ -1.01
RFC5-201ENST00000392542 NIPBLQ6KC79 2804 aaeCLIP8.71□□□□□ -1.01
RFC5-201ENST00000392542 H7C423 109 aa8.71□□□□□ -1.01
RFC5-201ENST00000392542 RPL13AP40429 203 aaKnown RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms