RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 IGKV3OR2-268A0A0C4DH90 116 aa9.94□□□□□ -0.82
IGHV3-53-201ENST00000390627 LOC389332A0A1B0GUA5 103 aa9.94□□□□□ -0.82
IGHV3-53-201ENST00000390627 LECT2O14960 151 aa9.94□□□□□ -0.82
IGHV3-53-201ENST00000390627 WFDC2Q14508 124 aa9.94□□□□□ -0.82
IGHV3-53-201ENST00000390627 SLC7A5P1Q8MH63 180 aa9.94□□□□□ -0.82
IGHV3-53-201ENST00000390627 CSDC2Q9Y534 153 aaKnown RBP9.94□□□□□ -0.82
IGHV3-53-201ENST00000390627 KIAA1644Q3SXP7 199 aa9.93□□□□□ -0.82
IGHV3-53-201ENST00000390627 C14orf177Q52M58 125 aa9.93□□□□□ -0.82
IGHV3-53-201ENST00000390627 Q8N8P6 123 aa9.93□□□□□ -0.82
IGHV3-53-201ENST00000390627 TIMM21Q9BVV7 248 aa9.93□□□□□ -0.82
IGHV3-53-201ENST00000390627 CDC42SE2Q9NRR3 84 aa9.93□□□□□ -0.82
IGHV3-53-201ENST00000390627 UBE2D4Q9Y2X8 147 aa9.93□□□□□ -0.82
IGHV3-53-201ENST00000390627 DNAH5Q8TE73 4624 aa9.93□□□□□ -0.82
IGHV3-53-201ENST00000390627 IGLV5-52A0A0A0MRZ9 124 aa9.92□□□□□ -0.82
IGHV3-53-201ENST00000390627 TGIF2-C20orf24A0A0A6YYL0 155 aa9.92□□□□□ -0.82
IGHV3-53-201ENST00000390627 KRTAP26-1Q6PEX3 210 aa9.92□□□□□ -0.82
IGHV3-53-201ENST00000390627 ZNF664Q8N3J9 261 aa9.92□□□□□ -0.82
IGHV3-53-201ENST00000390627 MRPL18Q9H0U6 180 aaKnown RBP9.92□□□□□ -0.82
IGHV3-53-201ENST00000390627 NXT2Q9NPJ8 142 aaKnown RBP9.92□□□□□ -0.82
IGHV3-53-201ENST00000390627 LRP1BQ9NZR2 4599 aa9.91□□□□□ -0.82
IGHV3-53-201ENST00000390627 K7EMI3 77 aa9.91□□□□□ -0.82
IGHV3-53-201ENST00000390627 FUSP35637 526 aaKnown RBP eCLIP9.91□□□□□ -0.82
IGHV3-53-201ENST00000390627 SPANXA1Q9NS26 97 aa9.91□□□□□ -0.82
IGHV3-53-201ENST00000390627 RPL39P62891 51 aaKnown RBP9.9□□□□□ -0.82
IGHV3-53-201ENST00000390627 FABP9Q0Z7S8 132 aa9.9□□□□□ -0.82
IGHV3-53-201ENST00000390627 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.89□□□□□ -0.83
IGHV3-53-201ENST00000390627 USP17L23D6RBM5 183 aa9.89□□□□□ -0.83
IGHV3-53-201ENST00000390627 SS18Q15532 418 aa9.89□□□□□ -0.83
IGHV3-53-201ENST00000390627 ORMDL2Q53FV1 153 aa9.89□□□□□ -0.83
IGHV3-53-201ENST00000390627 Q6ZUT4 128 aa9.89□□□□□ -0.83
IGHV3-53-201ENST00000390627 CHCHD10Q8WYQ3 142 aaPredicted RBP9.89□□□□□ -0.83
IGHV3-53-201ENST00000390627 TRAPPC1Q9Y5R8 145 aa9.89□□□□□ -0.83
IGHV3-53-201ENST00000390627 LINC00959A0A1B0GUT2 108 aa9.88□□□□□ -0.83
IGHV3-53-201ENST00000390627 GAGE12HA6NDE8 117 aa9.88□□□□□ -0.83
IGHV3-53-201ENST00000390627 GCSHP23434 173 aa9.88□□□□□ -0.83
IGHV3-53-201ENST00000390627 IFI27P40305 119 aaPredicted RBP9.88□□□□□ -0.83
IGHV3-53-201ENST00000390627 ALKBH7Q9BT30 221 aaPredicted RBP9.88□□□□□ -0.83
IGHV3-53-201ENST00000390627 SMCO4Q9NRQ5 59 aa9.88□□□□□ -0.83
IGHV3-53-201ENST00000390627 CCL25O15444 150 aa9.87□□□□□ -0.83
IGHV3-53-201ENST00000390627 G0S2P27469 103 aa9.87□□□□□ -0.83
IGHV3-53-201ENST00000390627 CYSLTR1Q9Y271 337 aa9.87□□□□□ -0.83
IGHV3-53-201ENST00000390627 MRPS36P82909 103 aaKnown RBP9.86□□□□□ -0.83
IGHV3-53-201ENST00000390627 RNASE13Q5GAN3 156 aaKnown RBP9.86□□□□□ -0.83
IGHV3-53-201ENST00000390627 PRSS3P2Q8NHM4 247 aa9.86□□□□□ -0.83
IGHV3-53-201ENST00000390627 YPEL4Q96NS1 127 aa9.86□□□□□ -0.83
IGHV3-53-201ENST00000390627 PYGO1Q9Y3Y4 419 aa9.86□□□□□ -0.83
IGHV3-53-201ENST00000390627 C1orf196B1AJZ1 125 aa9.85□□□□□ -0.83
IGHV3-53-201ENST00000390627 XCL1P47992 114 aa9.85□□□□□ -0.83
IGHV3-53-201ENST00000390627 CFAP161Q6P656 301 aa9.85□□□□□ -0.83
IGHV3-53-201ENST00000390627 C2orf66Q6UXQ4 117 aa9.85□□□□□ -0.83
IGHV3-53-201ENST00000390627 CBLN2Q8IUK8 224 aa9.85□□□□□ -0.83
IGHV3-53-201ENST00000390627 TRAV13-1A0A0B4J241 112 aa9.84□□□□□ -0.83
IGHV3-53-201ENST00000390627 CDK2AP2O75956 126 aa9.84□□□□□ -0.83
IGHV3-53-201ENST00000390627 FOXI1Q12951 378 aa9.84□□□□□ -0.83
IGHV3-53-201ENST00000390627 PRSS1P07477 247 aa9.83□□□□□ -0.84
IGHV3-53-201ENST00000390627 KRTAP10-1P60331 282 aa9.83□□□□□ -0.84
IGHV3-53-201ENST00000390627 CD164L2Q6UWJ8 174 aa9.83□□□□□ -0.84
IGHV3-53-201ENST00000390627 FA2HQ7L5A8 372 aa9.83□□□□□ -0.84
IGHV3-53-201ENST00000390627 IGLV4-3A0A075B6K6 122 aa9.82□□□□□ -0.84
IGHV3-53-201ENST00000390627 hDV102S1A0JD36 115 aa9.82□□□□□ -0.84
IGHV3-53-201ENST00000390627 NPSP0C0P6 89 aa9.82□□□□□ -0.84
IGHV3-53-201ENST00000390627 Q6ZN92 141 aa9.82□□□□□ -0.84
IGHV3-53-201ENST00000390627 TMEM141Q96I45 108 aa9.82□□□□□ -0.84
IGHV3-53-201ENST00000390627 OPRPNQ99935 248 aaPredicted RBP9.82□□□□□ -0.84
IGHV3-53-201ENST00000390627 AP5S1Q9NUS5 200 aa9.82□□□□□ -0.84
IGHV3-53-201ENST00000390627 LINC01546A6NGU7 62 aa9.81□□□□□ -0.84
IGHV3-53-201ENST00000390627 LINC01549A6NIU2 74 aa9.81□□□□□ -0.84
IGHV3-53-201ENST00000390627 IFITM10A6NMD0 228 aa9.81□□□□□ -0.84
IGHV3-53-201ENST00000390627 FAM104AQ969W3 186 aa9.81□□□□□ -0.84
IGHV3-53-201ENST00000390627 TEX43Q6ZNM6 134 aa9.8□□□□□ -0.84
IGHV3-53-201ENST00000390627 C15orf56Q8N910 161 aa9.8□□□□□ -0.84
IGHV3-53-201ENST00000390627 TOMM6Q96B49 74 aa9.8□□□□□ -0.84
IGHV3-53-201ENST00000390627 C2orf88Q9BSF0 95 aa9.8□□□□□ -0.84
IGHV3-53-201ENST00000390627 APOBP04114 4563 aaKnown RBP9.8□□□□□ -0.84
IGHV3-53-201ENST00000390627 KIAA1109Q2LD37 5005 aa9.8□□□□□ -0.84
IGHV3-53-201ENST00000390627 IGHV1-58A0A0C4DH39 117 aa9.79□□□□□ -0.84
IGHV3-53-201ENST00000390627 IGIPA6NJ69 53 aa9.79□□□□□ -0.84
IGHV3-53-201ENST00000390627 COX7A2LO14548 114 aa9.79□□□□□ -0.84
IGHV3-53-201ENST00000390627 PAPPA-AS1Q5QFB9 102 aa9.79□□□□□ -0.84
IGHV3-53-201ENST00000390627 C18orf32Q8TCD1 76 aa9.79□□□□□ -0.84
IGHV3-53-201ENST00000390627 TIMM17AQ99595 171 aa9.79□□□□□ -0.84
IGHV3-53-201ENST00000390627 GVQW2A0A096LPI5 108 aaPredicted RBP9.78□□□□□ -0.84
IGHV3-53-201ENST00000390627 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.78□□□□□ -0.84
IGHV3-53-201ENST00000390627 MALP21145 153 aa9.78□□□□□ -0.84
IGHV3-53-201ENST00000390627 CNBPP62633 177 aaKnown RBP9.78□□□□□ -0.84
IGHV3-53-201ENST00000390627 VCX2Q9H322 139 aa9.78□□□□□ -0.84
IGHV3-53-201ENST00000390627 RAB5BP61020 215 aa9.77□□□□□ -0.85
IGHV3-53-201ENST00000390627 HIGD2BQ4VC39 106 aa9.77□□□□□ -0.85
IGHV3-53-201ENST00000390627 ERASQ7Z444 233 aa9.77□□□□□ -0.85
IGHV3-53-201ENST00000390627 HSPG2P98160 4391 aa9.77□□□□□ -0.85
IGHV3-53-201ENST00000390627 RYR1P21817 5038 aa9.76□□□□□ -0.85
IGHV3-53-201ENST00000390627 LINC00614P0C842 121 aa9.76□□□□□ -0.85
IGHV3-53-201ENST00000390627 LINC01620Q4KN68 170 aa9.76□□□□□ -0.85
IGHV3-53-201ENST00000390627 C9orf163Q8N9P6 203 aa9.76□□□□□ -0.85
IGHV3-53-201ENST00000390627 SCGB3A1Q96QR1 104 aa9.76□□□□□ -0.85
IGHV3-53-201ENST00000390627 AMELXQ99217 191 aa9.76□□□□□ -0.85
IGHV3-53-201ENST00000390627 APOMO95445 188 aa9.75□□□□□ -0.85
IGHV3-53-201ENST00000390627 C5orf38Q86SI9 138 aa9.75□□□□□ -0.85
IGHV3-53-201ENST00000390627 DNAH8Q96JB1 4490 aa9.75□□□□□ -0.85
IGHV3-53-201ENST00000390627 HERC2O95714 4834 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms