RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 LENEPQ9Y5L5 61 aa-1.07□□□□□ -2.58
TRAJ28-201ENST00000390509 CUX1P39880 1505 aa-1.07□□□□□ -2.58
TRAJ28-201ENST00000390509 PRG4Q92954 1404 aaPredicted RBP-1.07□□□□□ -2.58
TRAJ28-201ENST00000390509 LRP5O75197 1615 aa-1.07□□□□□ -2.58
TRAJ28-201ENST00000390509 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 DCHS1Q96JQ0 3298 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 LOC400499M0QZD8 3231 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 MYH7BA7E2Y1 1941 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 LCE6AA0A183 80 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 A0A1B0GU69 56 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 IQCF5A8MTL0 148 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 PPP5D1E7EU14 171 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 H0YIV9 168 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 H7C1C5 153 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 BANF1O75531 89 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 SFT2D2O95562 160 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 MT-ATP8P03928 68 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 S100A6P06703 90 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 C3orf79P0CE67 100 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 FABP2P12104 132 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 HLA-DRB4P13762 266 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 SRP9P49458 86 aaKnown RBP-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 LCN6P62502 163 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 TMED2Q15363 201 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 RTL8BQ17RB0 113 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 WHAMMP3Q1A5X7 153 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 NKAIN1Q4KMZ8 207 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 SDHAF4Q5VUM1 108 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 MMGT1Q8N4V1 131 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 ATP6V0E2Q8NHE4 81 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 CDC26Q8NHZ8 85 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 DPH3Q96FX2 82 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 RTL8AQ9BWD3 113 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 PARVGQ9HBI0 331 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 FAIMQ9NVQ4 179 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 NOP16Q9Y3C1 178 aaKnown RBP-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 V9GYQ6 96 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 HLA-DRB4X5D2U9 266 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 ATP7BP35670 1465 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 PXDNQ92626 1479 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 ATAD2BQ9ULI0 1458 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 PCNTO95613 3336 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 TECPR2O15040 1411 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 ARFGEF1Q9Y6D6 1849 aa-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 EIF3AQ14152 1382 aaKnown RBP-1.08□□□□□ -2.58
TRAJ28-201ENST00000390509 AKAP11Q9UKA4 1901 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 ABCC9O60706 1549 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 UHRF1BP1LA0JNW5 1464 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 NCAPD3P42695 1498 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 MBD5Q9P267 1494 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 ECM29Q5VYK3 1845 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 BORCS7-ASMTA0A0B4J1R7 106 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 TRAV13-1A0A0B4J241 112 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 H3BMG7 143 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 J3QLW9 94 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 PDE6DO43924 150 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 IGLC1P0CG04 106 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 TCL1AP56279 114 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 LINC00158P58513 81 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 UBE2G1P62253 170 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 UBE2L3P68036 154 aaKnown RBP-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 CCL8P80075 99 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 C10orf128Q5T292 105 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 SPANXN1Q5VSR9 72 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 LINC01545Q5VT33 79 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 CROCCP2Q86T23 111 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 NUP35Q8NFH5 326 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 SPTSSBQ8NFR3 76 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 MYOZ3Q8TDC0 251 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 LCN9Q8WX39 176 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 CCDC124Q96CT7 223 aaKnown RBP-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 AQP10Q96PS8 301 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 AGPAT3Q9NRZ7 376 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 MRM2Q9UI43 246 aaKnown RBP-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 MKI67P46013 3256 aaKnown RBP-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 LRRC37A3O60309 1634 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 CD109Q6YHK3 1445 aa-1.09□□□□□ -2.58
TRAJ28-201ENST00000390509 DLC1Q96QB1 1528 aa-1.1□□□□□ -2.58
TRAJ28-201ENST00000390509 PATJQ8NI35 1801 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 HECW1Q76N89 1606 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 UBR2Q8IWV8 1755 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 TGIF2-C20orf24A0A0A6YYL0 155 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 TRBV7-7A0A0K0K1E9 115 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 LOC100506127A0A0U1RQW1 187 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 LOC285095A0A1B0GVY8 99 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 TRDV1A0A1B0GX56 115 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 RIIAD1A6NNX1 92 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 F8VZ95 297 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 M0QZ58 72 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 UQCRQO14949 82 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 HMGB3O15347 200 aaKnown RBP-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 DCTN3O75935 186 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 NDUFC2O95298 119 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 TNNC2P02585 160 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 APOEP02649 317 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 APOA2P02652 100 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 PET100P0DJ07 73 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 DEFB130BP0DP73 79 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 DEFB130AP0DP74 79 aa-1.1□□□□□ -2.59
TRAJ28-201ENST00000390509 HIST1H1BP16401 226 aaKnown RBP-1.1□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms