RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 PEMTQ9UBM1 199 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 TLN1Q9Y490 2541 aaKnown RBP2.5□□□□□ -2.01
TRAV39-201ENST00000390466 CFAP46Q8IYW2 2715 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 SPTA1P02549 2419 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 MAST4O15021 2626 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 NBASA2RRP1 2371 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 A0A1W2PPR1 153 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 F5H768 121 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 J3KT08 172 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 K7ENP7 123 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 S100A4P26447 101 aaKnown RBP2.49□□□□□ -2.01
TRAV39-201ENST00000390466 GRNP28799 593 aaKnown RBP2.49□□□□□ -2.01
TRAV39-201ENST00000390466 SAA4P35542 130 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 TIRAPP58753 221 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 RPL11P62913 178 aaKnown RBP2.49□□□□□ -2.01
TRAV39-201ENST00000390466 CDSNQ15517 529 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 SS18Q15532 418 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 C9orf129Q5T035 196 aaKnown RBP2.49□□□□□ -2.01
TRAV39-201ENST00000390466 C9orf153Q5TBE3 101 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 Q6JHZ5 121 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 FAM19A5Q7Z5A7 132 aaPredicted RBP2.49□□□□□ -2.01
TRAV39-201ENST00000390466 TMEM219Q86XT9 240 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 LINC00308Q8TCZ7 52 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 ZNF625Q96I27 306 aaPredicted RBP2.49□□□□□ -2.01
TRAV39-201ENST00000390466 Q9UF83 564 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 LINC00527Q9UJ94 153 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 UBE2D4Q9Y2X8 147 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 ADGRG4Q8IZF6 3080 aa2.49□□□□□ -2.01
TRAV39-201ENST00000390466 ZNF462Q96JM2 2506 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 PTPN13Q12923 2485 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 IGHV3OR16-12A0A075B7B8 117 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 TRAV41A0A0B4J266 112 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 TRAV12-3A0A0B4J271 114 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 SMIM1B2RUZ4 78 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 H3BUA1 57 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 CD28P10747 220 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 PROK1P58294 105 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 LMO4P61968 165 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 DAZ2Q13117 558 aaKnown RBP2.48□□□□□ -2.01
TRAV39-201ENST00000390466 Q1RN00 199 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 Q6ZSN1 163 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 DAZ4Q86SG3 579 aaKnown RBP2.48□□□□□ -2.01
TRAV39-201ENST00000390466 LINC00467Q9BRT7 94 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 DAZ1Q9NQZ3 744 aaKnown RBP2.48□□□□□ -2.01
TRAV39-201ENST00000390466 DAZ3Q9NR90 486 aaKnown RBP2.48□□□□□ -2.01
TRAV39-201ENST00000390466 CDKN2A-AS1Q9UH64 79 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 MOB4Q9Y3A3 225 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 COL12A1Q99715 3063 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 NOTCH3Q9UM47 2321 aa2.48□□□□□ -2.01
TRAV39-201ENST00000390466 NBPF19A0A087WUL8 3843 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 HECTD1Q9ULT8 2610 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 IGHV1OR15-1A0A075B7D0 117 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 TRAV25A0A0B4J276 109 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 hADV29S1A0JD25 119 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 RBMY1BA6NDE4 496 aaKnown RBP2.47□□□□□ -2.01
TRAV39-201ENST00000390466 RBMY1EA6NEQ0 496 aaKnown RBP2.47□□□□□ -2.01
TRAV39-201ENST00000390466 K7EMT4 169 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 K7EQG2 157 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 IGLV1-40P01703 118 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 RBMY1DP0C7P1 496 aaKnown RBP2.47□□□□□ -2.01
TRAV39-201ENST00000390466 RPL28P46779 137 aaKnown RBP2.47□□□□□ -2.01
TRAV39-201ENST00000390466 TMEM258P61165 79 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 COX6A2Q02221 97 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 RPL18AQ02543 176 aaKnown RBP2.47□□□□□ -2.01
TRAV39-201ENST00000390466 ZNF415Q09FC8 603 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 RNASE13Q5GAN3 156 aaKnown RBP2.47□□□□□ -2.01
TRAV39-201ENST00000390466 PIK3CD-AS1Q5SR53 167 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 KRTAP19-1Q8IUB9 90 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 LINC01561Q8N1V8 128 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 LINC00337Q8N6G1 96 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 KIR2DL5BQ8NHK3 375 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 LINC01560Q8TB33 94 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 DUX5Q96PT3 197 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 SPXQ9BT56 116 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 RHPN1-AS1Q9BWJ2 59 aa2.47□□□□□ -2.01
TRAV39-201ENST00000390466 TACC2O95359 2948 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 TEP1Q99973 2627 aaKnown RBP2.46□□□□□ -2.02
TRAV39-201ENST00000390466 IGKV2-28A0A075B6P5 120 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 A6NDX4 124 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 F5H697 171 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 ATOX1O00244 68 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 IGKV2D-28P01615 120 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 COX6CP09669 75 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 BAALC-AS2P0C853 105 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 NPC2P61916 151 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 ADORA2A-AS1P86434 159 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 LINC00242Q5T6M2 205 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 FAM74A4Q5TZK3 123 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 SERP2Q8N6R1 65 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 C11orf72Q8NBR9 251 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 IL17DQ8TAD2 202 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 DPH3Q96FX2 82 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 USMG5Q96IX5 58 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 Q96MF0 132 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 LINC00167Q96N53 147 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 BOD1L1Q8NFC6 3051 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 FLNCQ14315 2725 aa2.46□□□□□ -2.02
TRAV39-201ENST00000390466 UBR5O95071 2799 aaPredicted RBP2.45□□□□□ -2.02
TRAV39-201ENST00000390466 USP9XQ93008 2570 aaPredicted RBP2.45□□□□□ -2.02
TRAV39-201ENST00000390466 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms