RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 CTRLP40313 264 aa8.42□□□□□ -1.06
RPAIN-202ENST00000381208 LCE4AQ5TA78 99 aa8.42□□□□□ -1.06
RPAIN-202ENST00000381208 LYZL1Q6UWQ5 148 aa8.42□□□□□ -1.06
RPAIN-202ENST00000381208 C9orf163Q8N9P6 203 aa8.42□□□□□ -1.06
RPAIN-202ENST00000381208 OCC1Q8TAD7 63 aa8.42□□□□□ -1.06
RPAIN-202ENST00000381208 CNFNQ9BYD5 112 aa8.42□□□□□ -1.06
RPAIN-202ENST00000381208 K7EN84 100 aa8.41□□□□□ -1.06
RPAIN-202ENST00000381208 UBE2L6O14933 153 aa8.41□□□□□ -1.06
RPAIN-202ENST00000381208 PRSS1P07477 247 aa8.41□□□□□ -1.06
RPAIN-202ENST00000381208 NTF3P20783 257 aa8.41□□□□□ -1.06
RPAIN-202ENST00000381208 TGIF2-C20orf24A0A0A6YYL0 155 aa8.4□□□□□ -1.06
RPAIN-202ENST00000381208 HSBP1L1C9JCN9 74 aa8.4□□□□□ -1.06
RPAIN-202ENST00000381208 OXTP01178 125 aa8.4□□□□□ -1.06
RPAIN-202ENST00000381208 KRTAP26-1Q6PEX3 210 aa8.4□□□□□ -1.06
RPAIN-202ENST00000381208 CLPSL2Q6UWE3 100 aa8.4□□□□□ -1.06
RPAIN-202ENST00000381208 SMIM15Q7Z3B0 74 aa8.4□□□□□ -1.06
RPAIN-202ENST00000381208 NUDT10Q8NFP7 164 aa8.4□□□□□ -1.06
RPAIN-202ENST00000381208 NUDT11Q96G61 164 aa8.4□□□□□ -1.06
RPAIN-202ENST00000381208 OSTCQ9NRP0 149 aa8.4□□□□□ -1.06
RPAIN-202ENST00000381208 AP5S1Q9NUS5 200 aa8.4□□□□□ -1.06
RPAIN-202ENST00000381208 AMTP48728 403 aa8.39□□□□□ -1.07
RPAIN-202ENST00000381208 CNBPP62633 177 aaKnown RBP8.39□□□□□ -1.07
RPAIN-202ENST00000381208 TWIST1Q15672 202 aa8.39□□□□□ -1.07
RPAIN-202ENST00000381208 C20orf203Q8NBC4 194 aa8.39□□□□□ -1.07
RPAIN-202ENST00000381208 RNASE7Q9H1E1 156 aaKnown RBP8.39□□□□□ -1.07
RPAIN-202ENST00000381208 RPP21Q9H633 154 aaKnown RBP8.39□□□□□ -1.07
RPAIN-202ENST00000381208 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.38□□□□□ -1.07
RPAIN-202ENST00000381208 NCR2O95944 276 aa8.37□□□□□ -1.07
RPAIN-202ENST00000381208 KRTAP5-3Q6L8H2 238 aa8.37□□□□□ -1.07
RPAIN-202ENST00000381208 FAM231DQ6ZW35 169 aa8.37□□□□□ -1.07
RPAIN-202ENST00000381208 IGLV4-60A0A075B6I1 120 aa8.36□□□□□ -1.07
RPAIN-202ENST00000381208 IGLV10-54A0A075B6I4 117 aa8.36□□□□□ -1.07
RPAIN-202ENST00000381208 hDV102S1A0JD36 115 aa8.36□□□□□ -1.07
RPAIN-202ENST00000381208 C5orf52A6NGY3 159 aa8.36□□□□□ -1.07
RPAIN-202ENST00000381208 H7C423 109 aa8.36□□□□□ -1.07
RPAIN-202ENST00000381208 GATCO43716 136 aaKnown RBP8.36□□□□□ -1.07
RPAIN-202ENST00000381208 KRTAP10-4P60372 401 aaPredicted RBP8.36□□□□□ -1.07
RPAIN-202ENST00000381208 RPL37AP61513 92 aaKnown RBP8.36□□□□□ -1.07
RPAIN-202ENST00000381208 COX19Q49B96 90 aa8.36□□□□□ -1.07
RPAIN-202ENST00000381208 SDIM1Q6ZPB5 146 aa8.36□□□□□ -1.07
RPAIN-202ENST00000381208 TRGC2P03986 189 aa8.35□□□□□ -1.07
RPAIN-202ENST00000381208 SERTAD4-AS1Q5TG53 156 aa8.35□□□□□ -1.07
RPAIN-202ENST00000381208 RNF185Q96GF1 192 aa8.35□□□□□ -1.07
RPAIN-202ENST00000381208 IGHV3-64A0A075B6Q5 118 aa8.35□□□□□ -1.07
RPAIN-202ENST00000381208 A8MWL6 223 aa8.35□□□□□ -1.07
RPAIN-202ENST00000381208 PCP4P48539 62 aa8.35□□□□□ -1.07
RPAIN-202ENST00000381208 SNRPEP62304 92 aaKnown RBP8.35□□□□□ -1.07
RPAIN-202ENST00000381208 CT83Q5H943 113 aa8.35□□□□□ -1.07
RPAIN-202ENST00000381208 GATD1Q8NB37 220 aa8.35□□□□□ -1.07
RPAIN-202ENST00000381208 V9GYV3 84 aa8.35□□□□□ -1.07
RPAIN-202ENST00000381208 S100A8P05109 93 aa8.34□□□□□ -1.07
RPAIN-202ENST00000381208 S100A12P80511 92 aa8.34□□□□□ -1.07
RPAIN-202ENST00000381208 CIRBPQ14011 172 aaKnown RBP8.34□□□□□ -1.07
RPAIN-202ENST00000381208 AMMECR1LQ6DCA0 310 aa8.34□□□□□ -1.07
RPAIN-202ENST00000381208 BORCS7Q96B45 105 aa8.34□□□□□ -1.07
RPAIN-202ENST00000381208 HIST1H2BKO60814 126 aa8.33□□□□□ -1.08
RPAIN-202ENST00000381208 APCSP02743 223 aa8.33□□□□□ -1.08
RPAIN-202ENST00000381208 HIST1H2BJP06899 126 aa8.33□□□□□ -1.08
RPAIN-202ENST00000381208 ZNF25P17030 456 aaPredicted RBP8.33□□□□□ -1.08
RPAIN-202ENST00000381208 HIST1H2BOP23527 126 aa8.33□□□□□ -1.08
RPAIN-202ENST00000381208 HIST1H2BBP33778 126 aa8.33□□□□□ -1.08
RPAIN-202ENST00000381208 FOXA3P55318 350 aaPredicted RBP8.33□□□□□ -1.08
RPAIN-202ENST00000381208 HIST1H2BDP58876 126 aa8.33□□□□□ -1.08
RPAIN-202ENST00000381208 HIST1H2BCP62807 126 aa8.33□□□□□ -1.08
RPAIN-202ENST00000381208 FABP9Q0Z7S8 132 aa8.33□□□□□ -1.08
RPAIN-202ENST00000381208 HIST2H2BEQ16778 126 aa8.33□□□□□ -1.08
RPAIN-202ENST00000381208 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.33□□□□□ -1.08
RPAIN-202ENST00000381208 HIST1H2BHQ93079 126 aa8.33□□□□□ -1.08
RPAIN-202ENST00000381208 HIST1H2BNQ99877 126 aa8.33□□□□□ -1.08
RPAIN-202ENST00000381208 HIST1H2BMQ99879 126 aa8.33□□□□□ -1.08
RPAIN-202ENST00000381208 GFRA4Q9GZZ7 299 aa8.33□□□□□ -1.08
RPAIN-202ENST00000381208 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.33□□□□□ -1.08
RPAIN-202ENST00000381208 MT-ND6P03923 174 aa8.32□□□□□ -1.08
RPAIN-202ENST00000381208 GTSF1Q8WW33 167 aa8.32□□□□□ -1.08
RPAIN-202ENST00000381208 TRAV26-2A0A0B4J265 109 aa8.31□□□□□ -1.08
RPAIN-202ENST00000381208 TRBV6-5A0A0K0K1A5 114 aa8.31□□□□□ -1.08
RPAIN-202ENST00000381208 SMIM27A0A1W2PRY6 76 aa8.31□□□□□ -1.08
RPAIN-202ENST00000381208 SDHAF1A6NFY7 115 aa8.31□□□□□ -1.08
RPAIN-202ENST00000381208 PHOX2AO14813 284 aa8.31□□□□□ -1.08
RPAIN-202ENST00000381208 AKR1D1P51857 326 aa8.31□□□□□ -1.08
RPAIN-202ENST00000381208 RNASEKQ6P5S7 137 aaKnown RBP8.31□□□□□ -1.08
RPAIN-202ENST00000381208 TSKUQ8WUA8 353 aa8.31□□□□□ -1.08
RPAIN-202ENST00000381208 DPH3Q96FX2 82 aa8.31□□□□□ -1.08
RPAIN-202ENST00000381208 PKIGQ9Y2B9 76 aa8.31□□□□□ -1.08
RPAIN-202ENST00000381208 TRAPPC1Q9Y5R8 145 aa8.31□□□□□ -1.08
RPAIN-202ENST00000381208 FAM231BA6NCW3 169 aa8.3□□□□□ -1.08
RPAIN-202ENST00000381208 GAGE12HA6NDE8 117 aa8.3□□□□□ -1.08
RPAIN-202ENST00000381208 I3L3M4 83 aa8.3□□□□□ -1.08
RPAIN-202ENST00000381208 NDUFA6P56556 154 aa8.3□□□□□ -1.08
RPAIN-202ENST00000381208 TMEM101Q96IK0 257 aa8.3□□□□□ -1.08
RPAIN-202ENST00000381208 GNB1LQ9BYB4 327 aa8.3□□□□□ -1.08
RPAIN-202ENST00000381208 NAT8BQ9UHF3 227 aa8.3□□□□□ -1.08
RPAIN-202ENST00000381208 LRP1Q07954 4544 aaKnown RBP8.3□□□□□ -1.08
RPAIN-202ENST00000381208 FGF6P10767 208 aa8.29□□□□□ -1.08
RPAIN-202ENST00000381208 PMCHP20382 165 aa8.29□□□□□ -1.08
RPAIN-202ENST00000381208 ATP5L2Q7Z4Y8 100 aa8.29□□□□□ -1.08
RPAIN-202ENST00000381208 RPL39LQ96EH5 51 aaKnown RBP8.29□□□□□ -1.08
RPAIN-202ENST00000381208 IGKV3OR2-268A0A0C4DH90 116 aa8.28□□□□□ -1.08
RPAIN-202ENST00000381208 A0A1B0GUT8 65 aa8.28□□□□□ -1.08
RPAIN-202ENST00000381208 HIGD1CA8MV81 97 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms