RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 TRGV1A0A0A0MS02 117 aa9.11□□□□□ -0.95
VPS16-202ENST00000380445 NDUFV3P56181 108 aaKnown RBP9.11□□□□□ -0.95
VPS16-202ENST00000380445 SPANXA1Q9NS26 97 aa9.11□□□□□ -0.95
VPS16-202ENST00000380445 TMEM262E9PQX1 116 aa9.11□□□□□ -0.95
VPS16-202ENST00000380445 PSMB2P49721 201 aa9.11□□□□□ -0.95
VPS16-202ENST00000380445 ACANP16112 2415 aa9.1□□□□□ -0.95
VPS16-202ENST00000380445 GAGE2BQ13066 116 aa9.1□□□□□ -0.95
VPS16-202ENST00000380445 GAGE2EQ4V326 116 aa9.1□□□□□ -0.95
VPS16-202ENST00000380445 TEN1Q86WV5 123 aa9.1□□□□□ -0.95
VPS16-202ENST00000380445 GAGE2DQ9UEU5 116 aa9.1□□□□□ -0.95
VPS16-202ENST00000380445 TTC32Q5I0X7 151 aa9.1□□□□□ -0.95
VPS16-202ENST00000380445 AMELXQ99217 191 aa9.1□□□□□ -0.95
VPS16-202ENST00000380445 PF4P02776 101 aa9.09□□□□□ -0.95
VPS16-202ENST00000380445 DAZ2Q13117 558 aaKnown RBP9.09□□□□□ -0.95
VPS16-202ENST00000380445 C16orf74Q96GX8 76 aa9.09□□□□□ -0.95
VPS16-202ENST00000380445 C19orf73Q9NVV2 129 aa9.09□□□□□ -0.95
VPS16-202ENST00000380445 TRAV4A0A0B4J268 109 aa9.09□□□□□ -0.95
VPS16-202ENST00000380445 TRBV10-1A0A0K0K1A3 114 aa9.09□□□□□ -0.95
VPS16-202ENST00000380445 CYSRT1A8MQ03 144 aa9.09□□□□□ -0.95
VPS16-202ENST00000380445 SRSF9Q13242 221 aaKnown RBP eCLIP9.09□□□□□ -0.95
VPS16-202ENST00000380445 CHCHD7Q9BUK0 85 aa9.09□□□□□ -0.95
VPS16-202ENST00000380445 NF1P21359 2839 aa9.09□□□□□ -0.95
VPS16-202ENST00000380445 LOC107984156A0A0G2JMH3 177 aa9.08□□□□□ -0.96
VPS16-202ENST00000380445 J3QQQ9 107 aa9.08□□□□□ -0.96
VPS16-202ENST00000380445 LGALS3P17931 250 aaKnown RBP9.08□□□□□ -0.96
VPS16-202ENST00000380445 ARL17AQ8IVW1 177 aa9.08□□□□□ -0.96
VPS16-202ENST00000380445 TMEM223A0PJW6 202 aa9.08□□□□□ -0.96
VPS16-202ENST00000380445 LEPROTO15243 131 aa9.08□□□□□ -0.96
VPS16-202ENST00000380445 HIVEP2P31629 2446 aa9.08□□□□□ -0.96
VPS16-202ENST00000380445 IFITM1P13164 125 aa9.07□□□□□ -0.96
VPS16-202ENST00000380445 RPL36AP83881 106 aaKnown RBP9.07□□□□□ -0.96
VPS16-202ENST00000380445 RPL36ALQ969Q0 106 aaKnown RBP9.07□□□□□ -0.96
VPS16-202ENST00000380445 Q9UF83 564 aa9.07□□□□□ -0.96
VPS16-202ENST00000380445 UBE2D4Q9Y2X8 147 aa9.07□□□□□ -0.96
VPS16-202ENST00000380445 A0A0J9YXV3 536 aa9.07□□□□□ -0.96
VPS16-202ENST00000380445 GIG44P09565 113 aaPredicted RBP9.07□□□□□ -0.96
VPS16-202ENST00000380445 ZNF22P17026 224 aaPredicted RBP9.07□□□□□ -0.96
VPS16-202ENST00000380445 RPL35AP18077 110 aaKnown RBP9.07□□□□□ -0.96
VPS16-202ENST00000380445 MRPS36P82909 103 aaKnown RBP9.07□□□□□ -0.96
VPS16-202ENST00000380445 SFTA2Q6UW10 78 aa9.07□□□□□ -0.96
VPS16-202ENST00000380445 PLEKHB2Q96CS7 222 aa9.07□□□□□ -0.96
VPS16-202ENST00000380445 SNCGO76070 127 aa9.07□□□□□ -0.96
VPS16-202ENST00000380445 C5orf47Q569G3 176 aa9.07□□□□□ -0.96
VPS16-202ENST00000380445 Q6ZTI0 123 aa9.07□□□□□ -0.96
VPS16-202ENST00000380445 OTOGQ6ZRI0 2925 aa9.06□□□□□ -0.96
VPS16-202ENST00000380445 A0A0J9YY99 117 aa9.06□□□□□ -0.96
VPS16-202ENST00000380445 K7EQD1 137 aa9.06□□□□□ -0.96
VPS16-202ENST00000380445 WFDC10AQ9H1F0 79 aa9.06□□□□□ -0.96
VPS16-202ENST00000380445 NOP10Q9NPE3 64 aaKnown RBP9.06□□□□□ -0.96
VPS16-202ENST00000380445 IGHV3-38A0A0C4DH36 116 aa9.06□□□□□ -0.96
VPS16-202ENST00000380445 DAZ4Q86SG3 579 aaKnown RBP9.06□□□□□ -0.96
VPS16-202ENST00000380445 DAZ3Q9NR90 486 aaKnown RBP9.06□□□□□ -0.96
VPS16-202ENST00000380445 LINC00482Q8N8I6 264 aa9.05□□□□□ -0.96
VPS16-202ENST00000380445 TIMM21Q9BVV7 248 aa9.05□□□□□ -0.96
VPS16-202ENST00000380445 CSDC2Q9Y534 153 aaKnown RBP9.05□□□□□ -0.96
VPS16-202ENST00000380445 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.05□□□□□ -0.96
VPS16-202ENST00000380445 IGKV2-29A2NJV5 120 aaPredicted RBP9.05□□□□□ -0.96
VPS16-202ENST00000380445 TSPEAR-AS2P59090 65 aa9.05□□□□□ -0.96
VPS16-202ENST00000380445 KRTAP10-3P60369 221 aa9.05□□□□□ -0.96
VPS16-202ENST00000380445 MEIG1Q5JSS6 88 aa9.05□□□□□ -0.96
VPS16-202ENST00000380445 CSNK1G2-AS1Q8NCQ2 148 aa9.05□□□□□ -0.96
VPS16-202ENST00000380445 MTORP42345 2549 aa9.05□□□□□ -0.96
VPS16-202ENST00000380445 DGAT2L7PQ6IED9 249 aa9.04□□□□□ -0.96
VPS16-202ENST00000380445 CEMP1Q6PRD7 247 aaPredicted RBP9.04□□□□□ -0.96
VPS16-202ENST00000380445 SLC25A29Q8N8R3 303 aa9.04□□□□□ -0.96
VPS16-202ENST00000380445 FAM104AQ969W3 186 aa9.04□□□□□ -0.96
VPS16-202ENST00000380445 OVOL2Q9BRP0 275 aa9.04□□□□□ -0.96
VPS16-202ENST00000380445 CUBNO60494 3623 aa9.04□□□□□ -0.96
VPS16-202ENST00000380445 TINCRA0A1B0GVN0 87 aa9.04□□□□□ -0.96
VPS16-202ENST00000380445 TRGV2A0A075B6R0 118 aa9.03□□□□□ -0.96
VPS16-202ENST00000380445 ANK3Q12955 4377 aaKnown RBP9.03□□□□□ -0.96
VPS16-202ENST00000380445 INAFM1C9JVW0 142 aa9.03□□□□□ -0.96
VPS16-202ENST00000380445 ANKRD29Q8N6D5 301 aa9.03□□□□□ -0.96
VPS16-202ENST00000380445 C3orf56Q8N813 242 aa9.03□□□□□ -0.96
VPS16-202ENST00000380445 PLAC8L1A1L4L8 177 aa9.02□□□□□ -0.96
VPS16-202ENST00000380445 LYRM7Q5U5X0 104 aa9.02□□□□□ -0.96
VPS16-202ENST00000380445 CRLF1O75462 422 aa9.02□□□□□ -0.97
VPS16-202ENST00000380445 UBE2D1P51668 147 aa9.01□□□□□ -0.97
VPS16-202ENST00000380445 UBE2D3P61077 147 aa9.01□□□□□ -0.97
VPS16-202ENST00000380445 UBE2D2P62837 147 aa9.01□□□□□ -0.97
VPS16-202ENST00000380445 TRBV6-4A0A1B0GX49 114 aa9.01□□□□□ -0.97
VPS16-202ENST00000380445 SBSPONQ8IVN8 264 aa9.01□□□□□ -0.97
VPS16-202ENST00000380445 IGHV1-58A0A0C4DH39 117 aa9.01□□□□□ -0.97
VPS16-202ENST00000380445 TCL1BO95988 128 aa9.01□□□□□ -0.97
VPS16-202ENST00000380445 IGHV3-30P01768 117 aa9.01□□□□□ -0.97
VPS16-202ENST00000380445 IGHV3-30-5P0DP03 117 aa9.01□□□□□ -0.97
VPS16-202ENST00000380445 RNASE13Q5GAN3 156 aaKnown RBP9.01□□□□□ -0.97
VPS16-202ENST00000380445 C9orf66Q5T8R8 295 aa9.01□□□□□ -0.97
VPS16-202ENST00000380445 Q6Q795 121 aa9.01□□□□□ -0.97
VPS16-202ENST00000380445 IGHV3-64A0A075B6Q5 118 aa9□□□□□ -0.97
VPS16-202ENST00000380445 IGHV3-30-3P0DP02 117 aa9□□□□□ -0.97
VPS16-202ENST00000380445 MAST4O15021 2626 aa9□□□□□ -0.97
VPS16-202ENST00000380445 SCGB1C2P0DMR2 95 aa9□□□□□ -0.97
VPS16-202ENST00000380445 TIRAPP58753 221 aa9□□□□□ -0.97
VPS16-202ENST00000380445 SETD2Q9BYW2 2564 aaPredicted RBP9□□□□□ -0.97
VPS16-202ENST00000380445 A4D1N5 150 aa8.99□□□□□ -0.97
VPS16-202ENST00000380445 TRGV4A0A0C4DH28 118 aa8.99□□□□□ -0.97
VPS16-202ENST00000380445 TMEM126AQ9H061 195 aa8.99□□□□□ -0.97
VPS16-202ENST00000380445 VSIG2Q96IQ7 327 aa8.98□□□□□ -0.97
VPS16-202ENST00000380445 HIVEP1P15822 2718 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms