RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 HILS1P60008 231 aa5.74□□□□□ -1.49
PDLIM5-204ENST00000380176 PAPPA-AS1Q5QFB9 102 aa5.74□□□□□ -1.49
PDLIM5-204ENST00000380176 PIK3CD-AS1Q5SR53 167 aa5.74□□□□□ -1.49
PDLIM5-204ENST00000380176 DNAJC30Q96LL9 226 aa5.74□□□□□ -1.49
PDLIM5-204ENST00000380176 A0A0A0MQY5 61 aa5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 A0A0J9YXV3 536 aa5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 K7EP34 96 aa5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 GIG44P09565 113 aaPredicted RBP5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 C12orf74Q32Q52 190 aa5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 SCGB1D4Q6XE38 83 aa5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 NFE4Q86UQ8 179 aa5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 IGHV3-64A0A075B6Q5 118 aa5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 IGHV3-53P01767 116 aa5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 KRTAP10-3P60369 221 aa5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 CHCHD7Q9BUK0 85 aa5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 TMEM126AQ9H061 195 aa5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 FN1P02751 2386 aaKnown RBP5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 TRGV1A0A0A0MS02 117 aa5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 IGKV2-29A2NJV5 120 aaPredicted RBP5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 IL17DQ8TAD2 202 aa5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 AMELXQ99217 191 aa5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 SPCS1Q9Y6A9 102 aa5.73□□□□□ -1.49
PDLIM5-204ENST00000380176 J3QR89 54 aa5.72□□□□□ -1.49
PDLIM5-204ENST00000380176 IGLV1-51P01701 117 aa5.72□□□□□ -1.49
PDLIM5-204ENST00000380176 ZNF22P17026 224 aaPredicted RBP5.72□□□□□ -1.49
PDLIM5-204ENST00000380176 HERVK_113P61574 105 aa5.72□□□□□ -1.49
PDLIM5-204ENST00000380176 Q6ZTI0 123 aa5.72□□□□□ -1.49
PDLIM5-204ENST00000380176 C19orf73Q9NVV2 129 aa5.72□□□□□ -1.49
PDLIM5-204ENST00000380176 C2CD3Q4AC94 2353 aa5.72□□□□□ -1.49
PDLIM5-204ENST00000380176 VWFP04275 2813 aa5.72□□□□□ -1.49
PDLIM5-204ENST00000380176 A0A0J9YY99 117 aa5.72□□□□□ -1.49
PDLIM5-204ENST00000380176 TMEM223A0PJW6 202 aa5.72□□□□□ -1.49
PDLIM5-204ENST00000380176 IGLL5B9A064 214 aa5.72□□□□□ -1.49
PDLIM5-204ENST00000380176 RPL35AP18077 110 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-204ENST00000380176 J3QQQ9 107 aa5.71□□□□□ -1.49
PDLIM5-204ENST00000380176 RHODO00212 210 aa5.71□□□□□ -1.49
PDLIM5-204ENST00000380176 FABP2P12104 132 aa5.71□□□□□ -1.49
PDLIM5-204ENST00000380176 UBE2D4Q9Y2X8 147 aa5.71□□□□□ -1.49
PDLIM5-204ENST00000380176 PYGO1Q9Y3Y4 419 aa5.71□□□□□ -1.49
PDLIM5-204ENST00000380176 SRSF9Q13242 221 aaKnown RBP eCLIP5.71□□□□□ -1.5
PDLIM5-204ENST00000380176 A0A1B0GWB2 263 aa5.71□□□□□ -1.5
PDLIM5-204ENST00000380176 LY6G6DO95868 133 aa5.71□□□□□ -1.5
PDLIM5-204ENST00000380176 ANAPC13Q9BS18 74 aa5.71□□□□□ -1.5
PDLIM5-204ENST00000380176 C1QTNF4Q9BXJ3 329 aa5.71□□□□□ -1.5
PDLIM5-204ENST00000380176 USP17L23D6RBM5 183 aa5.7□□□□□ -1.5
PDLIM5-204ENST00000380176 TMEM263Q8WUH6 116 aaKnown RBP5.7□□□□□ -1.5
PDLIM5-204ENST00000380176 NOP10Q9NPE3 64 aaKnown RBP5.7□□□□□ -1.5
PDLIM5-204ENST00000380176 PLAC8L1A1L4L8 177 aa5.7□□□□□ -1.5
PDLIM5-204ENST00000380176 NDUFA7O95182 113 aa5.7□□□□□ -1.5
PDLIM5-204ENST00000380176 Q6ZUT4 128 aa5.7□□□□□ -1.5
PDLIM5-204ENST00000380176 OR5A1Q8NGJ0 315 aa5.7□□□□□ -1.5
PDLIM5-204ENST00000380176 LEPROTO15243 131 aa5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 LGALS3P17931 250 aaKnown RBP5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 MRPS36P82909 103 aaKnown RBP5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 RPL24P83731 157 aaKnown RBP5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 TRAV8-3A0A0A6YYJ7 113 aa5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 GAGE12JA6NER3 117 aa5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 GAGE7O76087 117 aa5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 GAGE12FP0CL80 117 aa5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 GAGE12GP0CL81 117 aa5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 GAGE12IP0CL82 117 aa5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 GAGE4Q13068 117 aa5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 C6orf226Q5I0X4 101 aa5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 SLC25A29Q8N8R3 303 aa5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 CSNK1G2-AS1Q8NCQ2 148 aa5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 OR13C6PQ8NH95 151 aa5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 SPATA3Q8NHX4 192 aa5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 TENM1Q9UKZ4 2725 aa5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 NSD1Q96L73 2696 aaPredicted RBP5.69□□□□□ -1.5
PDLIM5-204ENST00000380176 IGHV3-30P01768 117 aa5.68□□□□□ -1.5
PDLIM5-204ENST00000380176 IGHV3-30-5P0DP03 117 aa5.68□□□□□ -1.5
PDLIM5-204ENST00000380176 RRN3P1Q2M238 152 aa5.68□□□□□ -1.5
PDLIM5-204ENST00000380176 LINC00694P0DN24 101 aa5.68□□□□□ -1.5
PDLIM5-204ENST00000380176 IGHV3-30-3P0DP02 117 aa5.68□□□□□ -1.5
PDLIM5-204ENST00000380176 UBE2D1P51668 147 aa5.68□□□□□ -1.5
PDLIM5-204ENST00000380176 C10orf126Q8N4M7 172 aa5.68□□□□□ -1.5
PDLIM5-204ENST00000380176 APOMO95445 188 aa5.68□□□□□ -1.5
PDLIM5-204ENST00000380176 ZFAND6Q6FIF0 208 aa5.68□□□□□ -1.5
PDLIM5-204ENST00000380176 NTM-AS1Q6ZSK4 140 aa5.68□□□□□ -1.5
PDLIM5-204ENST00000380176 K7EQD1 137 aa5.67□□□□□ -1.5
PDLIM5-204ENST00000380176 SFTA2Q6UW10 78 aa5.67□□□□□ -1.5
PDLIM5-204ENST00000380176 SPANXB1Q9NS25 103 aaPredicted RBP5.67□□□□□ -1.5
PDLIM5-204ENST00000380176 V9GYY9 64 aa5.67□□□□□ -1.5
PDLIM5-204ENST00000380176 NBEAL2Q6ZNJ1 2754 aa5.67□□□□□ -1.5
PDLIM5-204ENST00000380176 TRAV4A0A0B4J268 109 aa5.67□□□□□ -1.5
PDLIM5-204ENST00000380176 INAFM1C9JVW0 142 aa5.67□□□□□ -1.5
PDLIM5-204ENST00000380176 H3BMG7 143 aa5.67□□□□□ -1.5
PDLIM5-204ENST00000380176 DAZ2Q13117 558 aaKnown RBP5.67□□□□□ -1.5
PDLIM5-204ENST00000380176 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.67□□□□□ -1.5
PDLIM5-204ENST00000380176 LOC100131303A0A0U1RQF7 123 aa5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 TINCRA0A1B0GVN0 87 aa5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 SPINK8P0C7L1 97 aa5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 CMC4P56277 68 aaPredicted RBP5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 GAGE13Q4V321 117 aa5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 TIMM21Q9BVV7 248 aa5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 TRRAPQ9Y4A5 3859 aa5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 HIVEP1P15822 2718 aa5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 CFC1BP0CG36 223 aa5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 CFC1P0CG37 223 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms