RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 C1orf158Q8N1D5 194 aa8.56□□□□□ -1.04
PTCHD1-201ENST00000379361 CHCHD10Q8WYQ3 142 aaPredicted RBP8.56□□□□□ -1.04
PTCHD1-201ENST00000379361 LOXL1Q08397 574 aaPredicted RBP8.55□□□□□ -1.04
PTCHD1-201ENST00000379361 NUPR2A6NF83 97 aa8.55□□□□□ -1.04
PTCHD1-201ENST00000379361 E9PLD3 99 aa8.55□□□□□ -1.04
PTCHD1-201ENST00000379361 LOC107984640A0A0U1RRK4 108 aa8.55□□□□□ -1.04
PTCHD1-201ENST00000379361 LRRC75A-AS1Q8N1F1 130 aa8.55□□□□□ -1.04
PTCHD1-201ENST00000379361 C10orf25Q5T742 122 aa8.55□□□□□ -1.04
PTCHD1-201ENST00000379361 M0R2N4 97 aa8.54□□□□□ -1.04
PTCHD1-201ENST00000379361 CCKP06307 115 aa8.54□□□□□ -1.04
PTCHD1-201ENST00000379361 SYCNQ0VAF6 134 aa8.54□□□□□ -1.04
PTCHD1-201ENST00000379361 IBA57-AS1B1ANH7 110 aa8.54□□□□□ -1.04
PTCHD1-201ENST00000379361 ITPR3Q14573 2671 aa8.54□□□□□ -1.04
PTCHD1-201ENST00000379361 IGLV9-49A0A0B4J1Y8 123 aa8.54□□□□□ -1.04
PTCHD1-201ENST00000379361 ENHOQ6UWT2 76 aa8.53□□□□□ -1.04
PTCHD1-201ENST00000379361 NRGNQ92686 78 aa8.53□□□□□ -1.04
PTCHD1-201ENST00000379361 COL4A6Q14031 1691 aa8.53□□□□□ -1.04
PTCHD1-201ENST00000379361 U3KQA8 63 aa8.53□□□□□ -1.04
PTCHD1-201ENST00000379361 PROK2Q9HC23 129 aa8.53□□□□□ -1.04
PTCHD1-201ENST00000379361 Q8N976 141 aa8.53□□□□□ -1.04
PTCHD1-201ENST00000379361 CHD6Q8TD26 2715 aa8.53□□□□□ -1.04
PTCHD1-201ENST00000379361 A0A0J9YX75 114 aa8.52□□□□□ -1.05
PTCHD1-201ENST00000379361 IGLV5-52A0A0A0MRZ9 124 aa8.52□□□□□ -1.05
PTCHD1-201ENST00000379361 RPL28P46779 137 aaKnown RBP8.52□□□□□ -1.05
PTCHD1-201ENST00000379361 IGHV4-30-4P0DP06 118 aa8.52□□□□□ -1.05
PTCHD1-201ENST00000379361 IGHV4-31P0DP07 118 aa8.52□□□□□ -1.05
PTCHD1-201ENST00000379361 FAM19A3Q7Z5A8 133 aa8.51□□□□□ -1.05
PTCHD1-201ENST00000379361 SPRY4Q9C004 299 aa8.51□□□□□ -1.05
PTCHD1-201ENST00000379361 LY6LH3BQJ8 138 aa8.51□□□□□ -1.05
PTCHD1-201ENST00000379361 ZNF843Q8N446 348 aa8.51□□□□□ -1.05
PTCHD1-201ENST00000379361 X6R8D5 127 aa8.51□□□□□ -1.05
PTCHD1-201ENST00000379361 TMEM223A0PJW6 202 aa8.51□□□□□ -1.05
PTCHD1-201ENST00000379361 A0A0J9YWU9 116 aa8.51□□□□□ -1.05
PTCHD1-201ENST00000379361 TEX15Q9BXT5 2789 aa8.51□□□□□ -1.05
PTCHD1-201ENST00000379361 MLST8Q9BVC4 326 aa8.5□□□□□ -1.05
PTCHD1-201ENST00000379361 C19orf71A6NCJ1 209 aa8.5□□□□□ -1.05
PTCHD1-201ENST00000379361 KPRPQ5T749 579 aaPredicted RBP8.5□□□□□ -1.05
PTCHD1-201ENST00000379361 COX17Q14061 63 aa8.5□□□□□ -1.05
PTCHD1-201ENST00000379361 STAB2Q8WWQ8 2551 aa8.5□□□□□ -1.05
PTCHD1-201ENST00000379361 PLA2G5P39877 138 aa8.5□□□□□ -1.05
PTCHD1-201ENST00000379361 FXYD2P54710 66 aa8.5□□□□□ -1.05
PTCHD1-201ENST00000379361 WT1P19544 449 aaPredicted RBP8.49□□□□□ -1.05
PTCHD1-201ENST00000379361 NDUFV3P56181 108 aaKnown RBP8.49□□□□□ -1.05
PTCHD1-201ENST00000379361 A0A0U1RQV1 116 aa8.49□□□□□ -1.05
PTCHD1-201ENST00000379361 IGLV2-18A0A075B6J9 118 aa8.49□□□□□ -1.05
PTCHD1-201ENST00000379361 LYPD6Q86Y78 171 aa8.49□□□□□ -1.05
PTCHD1-201ENST00000379361 WFDC13Q8IUB5 93 aa8.49□□□□□ -1.05
PTCHD1-201ENST00000379361 INAFM1C9JVW0 142 aa8.49□□□□□ -1.05
PTCHD1-201ENST00000379361 COL4A4P53420 1690 aaPredicted RBP8.49□□□□□ -1.05
PTCHD1-201ENST00000379361 PLAC8L1A1L4L8 177 aa8.49□□□□□ -1.05
PTCHD1-201ENST00000379361 SCXQ7RTU7 201 aa8.49□□□□□ -1.05
PTCHD1-201ENST00000379361 CD164L2Q6UWJ8 174 aa8.48□□□□□ -1.05
PTCHD1-201ENST00000379361 C3orf84H3BNL1 204 aa8.48□□□□□ -1.05
PTCHD1-201ENST00000379361 RITA1Q96K30 269 aa8.48□□□□□ -1.05
PTCHD1-201ENST00000379361 SDIM1Q6ZPB5 146 aa8.48□□□□□ -1.05
PTCHD1-201ENST00000379361 CIRBP-AS1Q8TBR5 109 aa8.48□□□□□ -1.05
PTCHD1-201ENST00000379361 A0A1B0GXF2 115 aa8.48□□□□□ -1.05
PTCHD1-201ENST00000379361 MSRB1Q9NZV6 116 aa8.48□□□□□ -1.05
PTCHD1-201ENST00000379361 TNFRSF13BO14836 293 aaPredicted RBP8.47□□□□□ -1.05
PTCHD1-201ENST00000379361 Q6YL49 198 aa8.47□□□□□ -1.05
PTCHD1-201ENST00000379361 WFDC2Q14508 124 aa8.47□□□□□ -1.05
PTCHD1-201ENST00000379361 CRIPAKQ8N1N5 446 aa8.47□□□□□ -1.05
PTCHD1-201ENST00000379361 C10orf91Q5T1B1 145 aa8.47□□□□□ -1.05
PTCHD1-201ENST00000379361 M0R378 163 aa8.47□□□□□ -1.05
PTCHD1-201ENST00000379361 CCDC140Q96MF4 163 aa8.47□□□□□ -1.05
PTCHD1-201ENST00000379361 MAP1AP78559 2803 aaPredicted RBP8.47□□□□□ -1.05
PTCHD1-201ENST00000379361 G3V4G9 280 aa8.46□□□□□ -1.05
PTCHD1-201ENST00000379361 Q6ZTI0 123 aa8.46□□□□□ -1.05
PTCHD1-201ENST00000379361 C20orf197Q8N268 126 aa8.46□□□□□ -1.05
PTCHD1-201ENST00000379361 UQCRQO14949 82 aa8.46□□□□□ -1.06
PTCHD1-201ENST00000379361 C20orf203Q8NBC4 194 aa8.46□□□□□ -1.06
PTCHD1-201ENST00000379361 IGLV4-69A0A075B6H9 119 aa8.46□□□□□ -1.06
PTCHD1-201ENST00000379361 SETXQ7Z333 2677 aaKnown RBP8.46□□□□□ -1.06
PTCHD1-201ENST00000379361 LOC100131303A0A0U1RQF7 123 aa8.46□□□□□ -1.06
PTCHD1-201ENST00000379361 DEFB114Q30KQ6 69 aa8.46□□□□□ -1.06
PTCHD1-201ENST00000379361 NEXN-AS1Q8NBZ9 246 aa8.45□□□□□ -1.06
PTCHD1-201ENST00000379361 PRORYQ9H606 182 aa8.45□□□□□ -1.06
PTCHD1-201ENST00000379361 TRBV6-8A0A0A6YYG3 113 aa8.45□□□□□ -1.06
PTCHD1-201ENST00000379361 ZNF503-AS2A6NEH8 195 aa8.45□□□□□ -1.06
PTCHD1-201ENST00000379361 LINC00467Q9BRT7 94 aa8.45□□□□□ -1.06
PTCHD1-201ENST00000379361 IGFL2Q6UWQ7 119 aa8.45□□□□□ -1.06
PTCHD1-201ENST00000379361 PPDPFQ9H3Y8 114 aa8.45□□□□□ -1.06
PTCHD1-201ENST00000379361 ADORA2A-AS1P86434 159 aa8.45□□□□□ -1.06
PTCHD1-201ENST00000379361 PRR4Q16378 134 aa8.45□□□□□ -1.06
PTCHD1-201ENST00000379361 C11orf53Q8IXP5 236 aa8.45□□□□□ -1.06
PTCHD1-201ENST00000379361 XAGE1AQ9HD64 81 aa8.45□□□□□ -1.06
PTCHD1-201ENST00000379361 MUC7Q8TAX7 377 aa8.44□□□□□ -1.06
PTCHD1-201ENST00000379361 A0A0J9YXY3 114 aa8.44□□□□□ -1.06
PTCHD1-201ENST00000379361 UNQ9165/PRO28630Q6UXU0 137 aa8.44□□□□□ -1.06
PTCHD1-201ENST00000379361 LELP1Q5T871 98 aa8.44□□□□□ -1.06
PTCHD1-201ENST00000379361 ODF3BA8MYP8 253 aa8.44□□□□□ -1.06
PTCHD1-201ENST00000379361 A6NDX4 124 aa8.44□□□□□ -1.06
PTCHD1-201ENST00000379361 HELZ2Q9BYK8 2649 aaKnown RBP8.44□□□□□ -1.06
PTCHD1-201ENST00000379361 LINC00337Q8N6G1 96 aa8.44□□□□□ -1.06
PTCHD1-201ENST00000379361 TDRG1Q3Y452 100 aa8.44□□□□□ -1.06
PTCHD1-201ENST00000379361 NOTCH1P46531 2555 aa8.44□□□□□ -1.06
PTCHD1-201ENST00000379361 IGLV3-1P01715 115 aa8.43□□□□□ -1.06
PTCHD1-201ENST00000379361 TRBV27A0A0K0K1C4 114 aa8.43□□□□□ -1.06
PTCHD1-201ENST00000379361 TRBV7-6A0A0J9YX20 115 aa8.42□□□□□ -1.06
PTCHD1-201ENST00000379361 IGKV2-28A0A075B6P5 120 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms