RNA–Protein interactions for RNA: ENST00000378633.5

CDK11A-205, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best) BASIC

Gene CDK11A, Length 2,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-205ENST00000378633 PPDPFLQ8WWR9 84 aa13.45□□□□□ -0.26
CDK11A-205ENST00000378633 CDKN2A-AS1Q9UH64 79 aa13.45□□□□□ -0.26
CDK11A-205ENST00000378633 ITPR3Q14573 2671 aa13.44□□□□□ -0.26
CDK11A-205ENST00000378633 IGLV5-45A0A087WSX0 123 aa13.44□□□□□ -0.26
CDK11A-205ENST00000378633 MIAQ16674 131 aa13.44□□□□□ -0.26
CDK11A-205ENST00000378633 DGAT2L7PQ6IED9 249 aa13.44□□□□□ -0.26
CDK11A-205ENST00000378633 SONP18583 2426 aaKnown RBP13.43□□□□□ -0.26
CDK11A-205ENST00000378633 Q1RN00 199 aa13.43□□□□□ -0.26
CDK11A-205ENST00000378633 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.42□□□□□ -0.26
CDK11A-205ENST00000378633 Q6ZTI0 123 aa13.42□□□□□ -0.26
CDK11A-205ENST00000378633 CITED2Q99967 270 aaPredicted RBP13.42□□□□□ -0.26
CDK11A-205ENST00000378633 TRBV10-1A0A0K0K1A3 114 aa13.41□□□□□ -0.26
CDK11A-205ENST00000378633 SLC25A20O43772 301 aa13.41□□□□□ -0.26
CDK11A-205ENST00000378633 ANKRD29Q8N6D5 301 aa13.41□□□□□ -0.26
CDK11A-205ENST00000378633 TRBV30A0A0K0K1B3 111 aa13.4□□□□□ -0.26
CDK11A-205ENST00000378633 C9JAW5 83 aa13.4□□□□□ -0.26
CDK11A-205ENST00000378633 K7EQD1 137 aa13.4□□□□□ -0.26
CDK11A-205ENST00000378633 LINC00694P0DN24 101 aa13.4□□□□□ -0.26
CDK11A-205ENST00000378633 RPL36AP83881 106 aaKnown RBP13.4□□□□□ -0.26
CDK11A-205ENST00000378633 COX6A2Q02221 97 aa13.4□□□□□ -0.26
CDK11A-205ENST00000378633 RPL36ALQ969Q0 106 aaKnown RBP13.4□□□□□ -0.26
CDK11A-205ENST00000378633 TMEM101Q96IK0 257 aa13.4□□□□□ -0.26
CDK11A-205ENST00000378633 CDIP1Q9H305 208 aa13.4□□□□□ -0.26
CDK11A-205ENST00000378633 WNK1Q9H4A3 2382 aa13.4□□□□□ -0.26
CDK11A-205ENST00000378633 M0QXV9 152 aa13.4□□□□□ -0.26
CDK11A-205ENST00000378633 TIMM17BO60830 172 aa13.4□□□□□ -0.26
CDK11A-205ENST00000378633 TRAV4A0A0B4J268 109 aa13.39□□□□□ -0.27
CDK11A-205ENST00000378633 NDUFA1O15239 70 aa13.39□□□□□ -0.27
CDK11A-205ENST00000378633 TRIAP1O43715 76 aa13.39□□□□□ -0.27
CDK11A-205ENST00000378633 NTM-AS1Q6ZSK4 140 aa13.39□□□□□ -0.27
CDK11A-205ENST00000378633 DAZ2Q13117 558 aaKnown RBP13.38□□□□□ -0.27
CDK11A-205ENST00000378633 ATXN8Q156A1 80 aa13.38□□□□□ -0.27
CDK11A-205ENST00000378633 LINC00242Q5T6M2 205 aa13.38□□□□□ -0.27
CDK11A-205ENST00000378633 DAZ4Q86SG3 579 aaKnown RBP13.38□□□□□ -0.27
CDK11A-205ENST00000378633 RNF183Q96D59 192 aa13.38□□□□□ -0.27
CDK11A-205ENST00000378633 DAZ3Q9NR90 486 aaKnown RBP13.38□□□□□ -0.27
CDK11A-205ENST00000378633 NPC2P61916 151 aa13.38□□□□□ -0.27
CDK11A-205ENST00000378633 HERVK_113P63121 156 aa13.38□□□□□ -0.27
CDK11A-205ENST00000378633 YAE1D1Q9NRH1 226 aa13.38□□□□□ -0.27
CDK11A-205ENST00000378633 CSDC2Q9Y534 153 aaKnown RBP13.38□□□□□ -0.27
CDK11A-205ENST00000378633 NF1P21359 2839 aa13.37□□□□□ -0.27
CDK11A-205ENST00000378633 GIG44P09565 113 aaPredicted RBP13.37□□□□□ -0.27
CDK11A-205ENST00000378633 FAM19A3Q7Z5A8 133 aa13.37□□□□□ -0.27
CDK11A-205ENST00000378633 IGLV5-39A0A0G2JS06 123 aa13.37□□□□□ -0.27
CDK11A-205ENST00000378633 LINC01006Q8NI28 216 aa13.37□□□□□ -0.27
CDK11A-205ENST00000378633 NOP10Q9NPE3 64 aaKnown RBP13.36□□□□□ -0.27
CDK11A-205ENST00000378633 IFITM1P13164 125 aa13.36□□□□□ -0.27
CDK11A-205ENST00000378633 LINC01620Q4KN68 170 aa13.36□□□□□ -0.27
CDK11A-205ENST00000378633 NBPF19A0A087WUL8 3843 aa13.35□□□□□ -0.27
CDK11A-205ENST00000378633 NDUFA7O95182 113 aa13.35□□□□□ -0.27
CDK11A-205ENST00000378633 ICOSQ9Y6W8 199 aa13.35□□□□□ -0.27
CDK11A-205ENST00000378633 GAGE12JA6NER3 117 aa13.35□□□□□ -0.27
CDK11A-205ENST00000378633 CMC4P56277 68 aaPredicted RBP13.35□□□□□ -0.27
CDK11A-205ENST00000378633 GAGE4Q13068 117 aa13.35□□□□□ -0.27
CDK11A-205ENST00000378633 GAGE5Q13069 117 aa13.35□□□□□ -0.27
CDK11A-205ENST00000378633 KRTAP1-1Q07627 177 aa13.34□□□□□ -0.27
CDK11A-205ENST00000378633 C16orf95Q9H693 158 aa13.34□□□□□ -0.27
CDK11A-205ENST00000378633 FLNAP21333 2647 aaKnown RBP13.34□□□□□ -0.27
CDK11A-205ENST00000378633 DAND5Q8N907 189 aa13.34□□□□□ -0.27
CDK11A-205ENST00000378633 PLAC8L1A1L4L8 177 aa13.33□□□□□ -0.28
CDK11A-205ENST00000378633 HIST2H2BCQ6DN03 193 aa13.33□□□□□ -0.28
CDK11A-205ENST00000378633 WFDC10AQ9H1F0 79 aa13.33□□□□□ -0.28
CDK11A-205ENST00000378633 CUBNO60494 3623 aa13.33□□□□□ -0.28
CDK11A-205ENST00000378633 RNASE1P07998 156 aaKnown RBP13.33□□□□□ -0.28
CDK11A-205ENST00000378633 LINC01600Q96MT4 127 aa13.33□□□□□ -0.28
CDK11A-205ENST00000378633 Q9H8V8 135 aa13.33□□□□□ -0.28
CDK11A-205ENST00000378633 CDC42SE2Q9NRR3 84 aa13.33□□□□□ -0.28
CDK11A-205ENST00000378633 TRAV13-1A0A0B4J241 112 aa13.32□□□□□ -0.28
CDK11A-205ENST00000378633 SMIM1B2RUZ4 78 aa13.32□□□□□ -0.28
CDK11A-205ENST00000378633 CIRBPQ14011 172 aaKnown RBP13.32□□□□□ -0.28
CDK11A-205ENST00000378633 C16orf74Q96GX8 76 aa13.32□□□□□ -0.28
CDK11A-205ENST00000378633 CCDC168Q8NDH2 2452 aa13.32□□□□□ -0.28
CDK11A-205ENST00000378633 C19orf73Q9NVV2 129 aa13.32□□□□□ -0.28
CDK11A-205ENST00000378633 IGLV1-51P01701 117 aa13.31□□□□□ -0.28
CDK11A-205ENST00000378633 FAM110AQ9BQ89 295 aa13.31□□□□□ -0.28
CDK11A-205ENST00000378633 TRBV10-2A0A0K0K1G8 114 aa13.3□□□□□ -0.28
CDK11A-205ENST00000378633 RPL35AP18077 110 aaKnown RBP13.3□□□□□ -0.28
CDK11A-205ENST00000378633 COX6CP09669 75 aa13.3□□□□□ -0.28
CDK11A-205ENST00000378633 GAGE7O76087 117 aa13.29□□□□□ -0.28
CDK11A-205ENST00000378633 GAGE12FP0CL80 117 aa13.29□□□□□ -0.28
CDK11A-205ENST00000378633 GAGE12GP0CL81 117 aa13.29□□□□□ -0.28
CDK11A-205ENST00000378633 GAGE12IP0CL82 117 aa13.29□□□□□ -0.28
CDK11A-205ENST00000378633 RPL13AP40429 203 aaKnown RBP13.29□□□□□ -0.28
CDK11A-205ENST00000378633 XGP55808 180 aa13.29□□□□□ -0.28
CDK11A-205ENST00000378633 TRGV2A0A075B6R0 118 aa13.29□□□□□ -0.28
CDK11A-205ENST00000378633 LINC00308Q8TCZ7 52 aa13.29□□□□□ -0.28
CDK11A-205ENST00000378633 F5H768 121 aa13.28□□□□□ -0.28
CDK11A-205ENST00000378633 MT-ATP8P03928 68 aa13.28□□□□□ -0.28
CDK11A-205ENST00000378633 CSNK1G2-AS1Q8NCQ2 148 aa13.28□□□□□ -0.28
CDK11A-205ENST00000378633 NTN5Q8WTR8 489 aaPredicted RBP13.28□□□□□ -0.28
CDK11A-205ENST00000378633 ZNF625Q96I27 306 aaPredicted RBP13.28□□□□□ -0.28
CDK11A-205ENST00000378633 TMEM243Q9BU79 118 aa13.28□□□□□ -0.28
CDK11A-205ENST00000378633 SETXQ7Z333 2677 aaKnown RBP13.27□□□□□ -0.28
CDK11A-205ENST00000378633 OVOL2Q9BRP0 275 aa13.27□□□□□ -0.29
CDK11A-205ENST00000378633 LOC100131303A0A0U1RQF7 123 aa13.27□□□□□ -0.29
CDK11A-205ENST00000378633 TRBV6-4A0A1B0GX49 114 aa13.27□□□□□ -0.29
CDK11A-205ENST00000378633 TMEM262E9PQX1 116 aa13.27□□□□□ -0.29
CDK11A-205ENST00000378633 UBE2L6O14933 153 aa13.27□□□□□ -0.29
CDK11A-205ENST00000378633 NIPBLQ6KC79 2804 aaeCLIP13.26□□□□□ -0.295e-6■■■□□ 16
CDK11A-205ENST00000378633 CIDEAO60543 219 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms