RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 C9orf129Q5T035 196 aaKnown RBP11.39□□□□□ -0.59
CSNK1A1-202ENST00000377843 UBE2D4Q9Y2X8 147 aa11.39□□□□□ -0.59
CSNK1A1-202ENST00000377843 ATOX1O00244 68 aa11.38□□□□□ -0.59
CSNK1A1-202ENST00000377843 GNLYP22749 145 aa11.38□□□□□ -0.59
CSNK1A1-202ENST00000377843 OR13C6PQ8NH95 151 aa11.38□□□□□ -0.59
CSNK1A1-202ENST00000377843 CHCHD7Q9BUK0 85 aa11.38□□□□□ -0.59
CSNK1A1-202ENST00000377843 ZNF462Q96JM2 2506 aa11.38□□□□□ -0.59
CSNK1A1-202ENST00000377843 TRACP01848 142 aa11.38□□□□□ -0.59
CSNK1A1-202ENST00000377843 DSCR8Q96T75 97 aa11.38□□□□□ -0.59
CSNK1A1-202ENST00000377843 TRAV25A0A0B4J276 109 aa11.37□□□□□ -0.59
CSNK1A1-202ENST00000377843 UPK3BQ9BT76 320 aa11.37□□□□□ -0.59
CSNK1A1-202ENST00000377843 SPG11Q96JI7 2443 aa11.37□□□□□ -0.59
CSNK1A1-202ENST00000377843 IGHV1OR15-1A0A075B7D0 117 aa11.36□□□□□ -0.59
CSNK1A1-202ENST00000377843 A0A087WVE0 104 aa11.36□□□□□ -0.59
CSNK1A1-202ENST00000377843 PRB1P04280 392 aa11.36□□□□□ -0.59
CSNK1A1-202ENST00000377843 COX6A2Q02221 97 aa11.36□□□□□ -0.59
CSNK1A1-202ENST00000377843 C4orf26Q17RF5 130 aa11.36□□□□□ -0.59
CSNK1A1-202ENST00000377843 Q9H8V8 135 aa11.36□□□□□ -0.59
CSNK1A1-202ENST00000377843 IGKV3D-7A0A0C4DH55 119 aa11.36□□□□□ -0.59
CSNK1A1-202ENST00000377843 RPL18AQ02543 176 aaKnown RBP11.36□□□□□ -0.59
CSNK1A1-202ENST00000377843 SPINK13Q1W4C9 94 aa11.36□□□□□ -0.59
CSNK1A1-202ENST00000377843 HOXD3P31249 432 aaPredicted RBP11.35□□□□□ -0.59
CSNK1A1-202ENST00000377843 LINC00467Q9BRT7 94 aa11.35□□□□□ -0.59
CSNK1A1-202ENST00000377843 Q6ZSN1 163 aa11.35□□□□□ -0.59
CSNK1A1-202ENST00000377843 CELSR2Q9HCU4 2923 aa11.35□□□□□ -0.59
CSNK1A1-202ENST00000377843 FAM222AQ5U5X8 452 aa11.34□□□□□ -0.59
CSNK1A1-202ENST00000377843 KNCNA6PVL3 124 aa11.33□□□□□ -0.6
CSNK1A1-202ENST00000377843 PRM2P04554 102 aa11.33□□□□□ -0.6
CSNK1A1-202ENST00000377843 Q5XG85 94 aa11.33□□□□□ -0.6
CSNK1A1-202ENST00000377843 NACAE9PAV3 2078 aa11.33□□□□□ -0.6
CSNK1A1-202ENST00000377843 IGHV3-38A0A0C4DH36 116 aa11.32□□□□□ -0.6
CSNK1A1-202ENST00000377843 A0A1W2PPR1 153 aa11.32□□□□□ -0.6
CSNK1A1-202ENST00000377843 MALP21145 153 aa11.32□□□□□ -0.6
CSNK1A1-202ENST00000377843 CIRBPQ14011 172 aaKnown RBP11.32□□□□□ -0.6
CSNK1A1-202ENST00000377843 C11orf71Q6IPW1 123 aa11.32□□□□□ -0.6
CSNK1A1-202ENST00000377843 FAM208BQ5VWN6 2430 aa11.32□□□□□ -0.6
CSNK1A1-202ENST00000377843 C19orf84I3L1E1 186 aa11.32□□□□□ -0.6
CSNK1A1-202ENST00000377843 INAFM2P0DMQ5 153 aa11.32□□□□□ -0.6
CSNK1A1-202ENST00000377843 TMEM258P61165 79 aa11.32□□□□□ -0.6
CSNK1A1-202ENST00000377843 RNF152Q8N8N0 203 aa11.32□□□□□ -0.6
CSNK1A1-202ENST00000377843 IGLV5-45A0A087WSX0 123 aa11.31□□□□□ -0.6
CSNK1A1-202ENST00000377843 RBMY1A1P0DJD3 496 aaKnown RBP11.31□□□□□ -0.6
CSNK1A1-202ENST00000377843 RBMY1CP0DJD4 496 aa11.31□□□□□ -0.6
CSNK1A1-202ENST00000377843 RBMY1FQ15415 496 aaKnown RBP11.31□□□□□ -0.6
CSNK1A1-202ENST00000377843 LINC01561Q8N1V8 128 aa11.31□□□□□ -0.6
CSNK1A1-202ENST00000377843 MOB4Q9Y3A3 225 aa11.31□□□□□ -0.6
CSNK1A1-202ENST00000377843 PIK3CD-AS1Q5SR53 167 aa11.31□□□□□ -0.6
CSNK1A1-202ENST00000377843 HRCT1Q6UXD1 115 aa11.31□□□□□ -0.6
CSNK1A1-202ENST00000377843 PRIMA1Q86XR5 153 aa11.31□□□□□ -0.6
CSNK1A1-202ENST00000377843 C14orf132Q9NPU4 83 aa11.31□□□□□ -0.6
CSNK1A1-202ENST00000377843 LINC00846Q9NV44 126 aa11.31□□□□□ -0.6
CSNK1A1-202ENST00000377843 LRRK2Q5S007 2527 aa11.31□□□□□ -0.6
CSNK1A1-202ENST00000377843 SERP2Q8N6R1 65 aa11.3□□□□□ -0.6
CSNK1A1-202ENST00000377843 IGLV5-39A0A0G2JS06 123 aa11.3□□□□□ -0.6
CSNK1A1-202ENST00000377843 PF4V1P10720 104 aa11.3□□□□□ -0.6
CSNK1A1-202ENST00000377843 HTN1P15515 57 aa11.3□□□□□ -0.6
CSNK1A1-202ENST00000377843 IGHV3OR16-12A0A075B7B8 117 aa11.28□□□□□ -0.6
CSNK1A1-202ENST00000377843 DOPEY2Q9Y3R5 2298 aa11.28□□□□□ -0.6
CSNK1A1-202ENST00000377843 FBXL19-AS1Q494R0 122 aa11.28□□□□□ -0.6
CSNK1A1-202ENST00000377843 A0A087WYN8 130 aa11.27□□□□□ -0.6
CSNK1A1-202ENST00000377843 BBC3Q96PG8 261 aaPredicted RBP11.27□□□□□ -0.6
CSNK1A1-202ENST00000377843 POLQO75417 2590 aa11.27□□□□□ -0.6
CSNK1A1-202ENST00000377843 LINC00242Q5T6M2 205 aa11.27□□□□□ -0.61
CSNK1A1-202ENST00000377843 USMG5Q96IX5 58 aa11.27□□□□□ -0.61
CSNK1A1-202ENST00000377843 USP17L23D6RBM5 183 aa11.26□□□□□ -0.61
CSNK1A1-202ENST00000377843 DNAL4O96015 105 aa11.26□□□□□ -0.61
CSNK1A1-202ENST00000377843 Q6JHZ5 121 aa11.26□□□□□ -0.61
CSNK1A1-202ENST00000377843 SMIM1B2RUZ4 78 aa11.26□□□□□ -0.61
CSNK1A1-202ENST00000377843 NBPF19A0A087WUL8 3843 aa11.26□□□□□ -0.61
CSNK1A1-202ENST00000377843 F5H768 121 aa11.25□□□□□ -0.61
CSNK1A1-202ENST00000377843 LY6EQ16553 131 aa11.25□□□□□ -0.61
CSNK1A1-202ENST00000377843 SORL1Q92673 2214 aa11.25□□□□□ -0.61
CSNK1A1-202ENST00000377843 HIST2H2BCQ6DN03 193 aa11.25□□□□□ -0.61
CSNK1A1-202ENST00000377843 HIST2H2BDQ6DRA6 164 aa11.25□□□□□ -0.61
CSNK1A1-202ENST00000377843 BRD3OSQ6XYD6 125 aa11.25□□□□□ -0.61
CSNK1A1-202ENST00000377843 SYNJ2BPP57105 145 aa11.24□□□□□ -0.61
CSNK1A1-202ENST00000377843 FHL2Q14192 279 aa11.24□□□□□ -0.61
CSNK1A1-202ENST00000377843 LINC00337Q8N6G1 96 aa11.24□□□□□ -0.61
CSNK1A1-202ENST00000377843 CHD6Q8TD26 2715 aa11.24□□□□□ -0.61
CSNK1A1-202ENST00000377843 BLCAPP62952 87 aa11.24□□□□□ -0.61
CSNK1A1-202ENST00000377843 PIMREGQ9BSJ6 248 aa11.24□□□□□ -0.61
CSNK1A1-202ENST00000377843 DOPEY1Q5JWR5 2465 aa11.24□□□□□ -0.61
CSNK1A1-202ENST00000377843 RPL28P46779 137 aaKnown RBP11.23□□□□□ -0.61
CSNK1A1-202ENST00000377843 IGKV2-28A0A075B6P5 120 aa11.23□□□□□ -0.61
CSNK1A1-202ENST00000377843 IGKV2D-28P01615 120 aa11.23□□□□□ -0.61
CSNK1A1-202ENST00000377843 HILS1P60008 231 aa11.23□□□□□ -0.61
CSNK1A1-202ENST00000377843 OBSCN-AS1Q96MR7 158 aa11.23□□□□□ -0.61
CSNK1A1-202ENST00000377843 C10orf105Q8TEF2 133 aa11.22□□□□□ -0.61
CSNK1A1-202ENST00000377843 LMO4P61968 165 aa11.22□□□□□ -0.61
CSNK1A1-202ENST00000377843 K7EMT4 169 aa11.21□□□□□ -0.61
CSNK1A1-202ENST00000377843 K7EQG2 157 aa11.21□□□□□ -0.61
CSNK1A1-202ENST00000377843 NCR3O14931 201 aa11.21□□□□□ -0.61
CSNK1A1-202ENST00000377843 ZNF415Q09FC8 603 aa11.21□□□□□ -0.62
CSNK1A1-202ENST00000377843 SNRPD3P62318 126 aaKnown RBP11.2□□□□□ -0.62
CSNK1A1-202ENST00000377843 FBN2P35556 2912 aa11.2□□□□□ -0.62
CSNK1A1-202ENST00000377843 DGAT2L7PQ6IED9 249 aa11.2□□□□□ -0.62
CSNK1A1-202ENST00000377843 SMIM11BQ8TCY0 68 aa11.2□□□□□ -0.62
CSNK1A1-202ENST00000377843 H3BUA1 57 aa11.19□□□□□ -0.62
CSNK1A1-202ENST00000377843 IGLV1-40P01703 118 aa11.19□□□□□ -0.62
CSNK1A1-202ENST00000377843 COPS9Q8WXC6 57 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms