RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 C11orf71Q6IPW1 123 aa8.18□□□□□ -1.1
HIF3A-205ENST00000377670 ZNF295-AS1Q8N0V1 137 aa8.18□□□□□ -1.1
HIF3A-205ENST00000377670 Q8N1Y9 231 aa8.18□□□□□ -1.1
HIF3A-205ENST00000377670 PKD1L2Q7Z442 2459 aa8.18□□□□□ -1.1
HIF3A-205ENST00000377670 MGAQ8IWI9 3026 aa8.18□□□□□ -1.1
HIF3A-205ENST00000377670 A0A087WZ39 114 aa8.18□□□□□ -1.1
HIF3A-205ENST00000377670 UNQ9165/PRO28630Q6UXU0 137 aa8.18□□□□□ -1.1
HIF3A-205ENST00000377670 ACANP16112 2415 aa8.17□□□□□ -1.1
HIF3A-205ENST00000377670 NDUFV3P56181 108 aaKnown RBP8.17□□□□□ -1.1
HIF3A-205ENST00000377670 SPAG11BQ08648 103 aa8.17□□□□□ -1.1
HIF3A-205ENST00000377670 C9orf47Q6ZRZ4 202 aa8.17□□□□□ -1.1
HIF3A-205ENST00000377670 COL6A3P12111 3177 aa8.17□□□□□ -1.1
HIF3A-205ENST00000377670 NDUFA7O95182 113 aa8.17□□□□□ -1.1
HIF3A-205ENST00000377670 KIR2DL5BQ8NHK3 375 aa8.17□□□□□ -1.1
HIF3A-205ENST00000377670 LECT2O14960 151 aa8.17□□□□□ -1.1
HIF3A-205ENST00000377670 H3BT86 120 aa8.17□□□□□ -1.1
HIF3A-205ENST00000377670 ODF3BA8MYP8 253 aa8.16□□□□□ -1.1
HIF3A-205ENST00000377670 C11orf1Q9H5F2 150 aa8.16□□□□□ -1.1
HIF3A-205ENST00000377670 NDUFB1O75438 58 aa8.16□□□□□ -1.1
HIF3A-205ENST00000377670 NCR3O14931 201 aa8.16□□□□□ -1.1
HIF3A-205ENST00000377670 FUSP35637 526 aaKnown RBP eCLIP8.16□□□□□ -1.1
HIF3A-205ENST00000377670 OPRPNQ99935 248 aaPredicted RBP8.16□□□□□ -1.1
HIF3A-205ENST00000377670 CTRLP40313 264 aa8.16□□□□□ -1.1
HIF3A-205ENST00000377670 ATG2AQ2TAZ0 1938 aa8.15□□□□□ -1.1
HIF3A-205ENST00000377670 P0C879 139 aa8.15□□□□□ -1.1
HIF3A-205ENST00000377670 SPANXB1Q9NS25 103 aaPredicted RBP8.15□□□□□ -1.1
HIF3A-205ENST00000377670 PSMG3-AS1Q96PY0 264 aa8.15□□□□□ -1.1
HIF3A-205ENST00000377670 RBX1P62877 108 aa8.15□□□□□ -1.11
HIF3A-205ENST00000377670 DOPEY1Q5JWR5 2465 aa8.15□□□□□ -1.11
HIF3A-205ENST00000377670 A0A0J9YX75 114 aa8.14□□□□□ -1.11
HIF3A-205ENST00000377670 HIGD2BQ4VC39 106 aa8.14□□□□□ -1.11
HIF3A-205ENST00000377670 GDF5OSQ5U4N7 250 aa8.14□□□□□ -1.11
HIF3A-205ENST00000377670 C19orf71A6NCJ1 209 aa8.14□□□□□ -1.11
HIF3A-205ENST00000377670 NREPQ16612 68 aa8.14□□□□□ -1.11
HIF3A-205ENST00000377670 C10orf99Q6UWK7 81 aa8.14□□□□□ -1.11
HIF3A-205ENST00000377670 ZNF702PQ9H963 129 aa8.14□□□□□ -1.11
HIF3A-205ENST00000377670 IGKV1D-37A0A075B6S9 117 aa8.14□□□□□ -1.11
HIF3A-205ENST00000377670 WI2-2373I1.2A0A1W2PRP0 233 aa8.14□□□□□ -1.11
HIF3A-205ENST00000377670 C14orf132Q9NPU4 83 aa8.14□□□□□ -1.11
HIF3A-205ENST00000377670 DSCAML1Q8TD84 2053 aa8.14□□□□□ -1.11
HIF3A-205ENST00000377670 TEX49A0A1B0GTD5 131 aa8.13□□□□□ -1.11
HIF3A-205ENST00000377670 A0A1B0GXF2 115 aa8.13□□□□□ -1.11
HIF3A-205ENST00000377670 LINC00643Q86TS7 51 aa8.13□□□□□ -1.11
HIF3A-205ENST00000377670 UBE2D4Q9Y2X8 147 aa8.13□□□□□ -1.11
HIF3A-205ENST00000377670 A0A0J9YWU9 116 aa8.13□□□□□ -1.11
HIF3A-205ENST00000377670 SVIPQ8NHG7 77 aa8.13□□□□□ -1.11
HIF3A-205ENST00000377670 TRAV23DV6A0A075B6W5 121 aa8.12□□□□□ -1.11
HIF3A-205ENST00000377670 JMJD7-PLA2G4BH0Y9G9 81 aa8.12□□□□□ -1.11
HIF3A-205ENST00000377670 MP68P56378 58 aa8.12□□□□□ -1.11
HIF3A-205ENST00000377670 CXCL5P42830 114 aa8.12□□□□□ -1.11
HIF3A-205ENST00000377670 BBC3Q96PG8 261 aaPredicted RBP8.12□□□□□ -1.11
HIF3A-205ENST00000377670 IGLV2-8P01709 118 aa8.12□□□□□ -1.11
HIF3A-205ENST00000377670 LINC00322Q6ZN03 302 aaPredicted RBP8.12□□□□□ -1.11
HIF3A-205ENST00000377670 CHKB-CPT1BH3BT56 60 aa8.11□□□□□ -1.11
HIF3A-205ENST00000377670 IGHV1-58A0A0C4DH39 117 aa8.11□□□□□ -1.11
HIF3A-205ENST00000377670 FSTL3O95633 263 aa8.11□□□□□ -1.11
HIF3A-205ENST00000377670 EIF4EBP1Q13541 118 aaPredicted RBP8.11□□□□□ -1.11
HIF3A-205ENST00000377670 NHLRC4P0CG21 123 aaPredicted RBP8.11□□□□□ -1.11
HIF3A-205ENST00000377670 CCDC140Q96MF4 163 aa8.11□□□□□ -1.11
HIF3A-205ENST00000377670 SDIM1Q6ZPB5 146 aa8.1□□□□□ -1.11
HIF3A-205ENST00000377670 MIR7-3HGQ8N6C7 128 aa8.1□□□□□ -1.11
HIF3A-205ENST00000377670 CENPEQ02224 2701 aa8.1□□□□□ -1.11
HIF3A-205ENST00000377670 IGLC6P0CF74 106 aa8.1□□□□□ -1.11
HIF3A-205ENST00000377670 IGHV4-30-4P0DP06 118 aa8.1□□□□□ -1.11
HIF3A-205ENST00000377670 NANOS2P60321 138 aaKnown RBP8.1□□□□□ -1.11
HIF3A-205ENST00000377670 Q6ZTI0 123 aa8.1□□□□□ -1.11
HIF3A-205ENST00000377670 LINC00574Q9H8X3 128 aa8.1□□□□□ -1.11
HIF3A-205ENST00000377670 TRBV6-1A0A0K0K1D8 114 aa8.1□□□□□ -1.11
HIF3A-205ENST00000377670 A0A1W2PPR1 153 aa8.1□□□□□ -1.11
HIF3A-205ENST00000377670 MPLKIPQ8TAP9 179 aa8.1□□□□□ -1.11
HIF3A-205ENST00000377670 HIGD2AQ9BW72 106 aa8.1□□□□□ -1.11
HIF3A-205ENST00000377670 ADAMTS20P59510 1910 aa8.1□□□□□ -1.11
HIF3A-205ENST00000377670 IGKV2D-26A0A0A0MRZ7 120 aa8.09□□□□□ -1.11
HIF3A-205ENST00000377670 YPEL4Q96NS1 127 aa8.09□□□□□ -1.11
HIF3A-205ENST00000377670 CEMP1Q6PRD7 247 aaPredicted RBP8.09□□□□□ -1.11
HIF3A-205ENST00000377670 TP53TG3Q9ULZ0 132 aa8.09□□□□□ -1.11
HIF3A-205ENST00000377670 UQCRQO14949 82 aa8.09□□□□□ -1.11
HIF3A-205ENST00000377670 UPK3BQ9BT76 320 aa8.09□□□□□ -1.11
HIF3A-205ENST00000377670 TNRC6BQ9UPQ9 1833 aaKnown RBP8.09□□□□□ -1.11
HIF3A-205ENST00000377670 REG3AQ06141 175 aa8.09□□□□□ -1.11
HIF3A-205ENST00000377670 MIAQ16674 131 aa8.09□□□□□ -1.11
HIF3A-205ENST00000377670 TRBV10-1A0A0K0K1A3 114 aa8.08□□□□□ -1.12
HIF3A-205ENST00000377670 KPRPQ5T749 579 aaPredicted RBP8.08□□□□□ -1.12
HIF3A-205ENST00000377670 Q6ZS46 218 aa8.08□□□□□ -1.12
HIF3A-205ENST00000377670 EXPH5Q8NEV8 1989 aa8.08□□□□□ -1.12
HIF3A-205ENST00000377670 LINC00269Q8N2A0 174 aa8.08□□□□□ -1.12
HIF3A-205ENST00000377670 TMEM256-PLSCR3K7ERE1 68 aa8.08□□□□□ -1.12
HIF3A-205ENST00000377670 ZNF80P51504 273 aaPredicted RBP8.08□□□□□ -1.12
HIF3A-205ENST00000377670 A0A0J9YXY3 114 aa8.08□□□□□ -1.12
HIF3A-205ENST00000377670 C20orf197Q8N268 126 aa8.08□□□□□ -1.12
HIF3A-205ENST00000377670 C3orf22Q8N5N4 141 aa8.08□□□□□ -1.12
HIF3A-205ENST00000377670 C9orf85Q96MD7 179 aa8.08□□□□□ -1.12
HIF3A-205ENST00000377670 MED14OSP0DP75 135 aa8.07□□□□□ -1.12
HIF3A-205ENST00000377670 FLNBO75369 2602 aaKnown RBP8.07□□□□□ -1.12
HIF3A-205ENST00000377670 A0A0U1RQV1 116 aa8.07□□□□□ -1.12
HIF3A-205ENST00000377670 C20orf203Q8NBC4 194 aa8.07□□□□□ -1.12
HIF3A-205ENST00000377670 CPAMD8Q8IZJ3 1885 aa8.06□□□□□ -1.12
HIF3A-205ENST00000377670 FAM19A1Q7Z5A9 133 aa8.06□□□□□ -1.12
HIF3A-205ENST00000377670 MDFICQ9P1T7 246 aa8.06□□□□□ -1.12
HIF3A-205ENST00000377670 H3BQ85 93 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms