RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 IGHV3OR16-12A0A075B7B8 117 aa8.41□□□□□ -1.06
TNFRSF9-201ENST00000377507 TRGV1A0A0A0MS02 117 aa8.41□□□□□ -1.06
TNFRSF9-201ENST00000377507 A8MZ25 164 aa8.41□□□□□ -1.06
TNFRSF9-201ENST00000377507 DAZ2Q13117 558 aaKnown RBP8.41□□□□□ -1.06
TNFRSF9-201ENST00000377507 DAZ4Q86SG3 579 aaKnown RBP8.41□□□□□ -1.06
TNFRSF9-201ENST00000377507 C16orf95Q9H693 158 aa8.41□□□□□ -1.06
TNFRSF9-201ENST00000377507 DAZ3Q9NR90 486 aaKnown RBP8.41□□□□□ -1.06
TNFRSF9-201ENST00000377507 CENPEQ02224 2701 aa8.41□□□□□ -1.06
TNFRSF9-201ENST00000377507 TRAV4A0A0B4J268 109 aa8.41□□□□□ -1.06
TNFRSF9-201ENST00000377507 IGLV5-39A0A0G2JS06 123 aa8.41□□□□□ -1.06
TNFRSF9-201ENST00000377507 NDUFA1O15239 70 aa8.41□□□□□ -1.06
TNFRSF9-201ENST00000377507 GIG44P09565 113 aaPredicted RBP8.41□□□□□ -1.06
TNFRSF9-201ENST00000377507 TMEM101Q96IK0 257 aa8.41□□□□□ -1.06
TNFRSF9-201ENST00000377507 CITED2Q99967 270 aaPredicted RBP8.41□□□□□ -1.06
TNFRSF9-201ENST00000377507 FAM110AQ9BQ89 295 aa8.41□□□□□ -1.06
TNFRSF9-201ENST00000377507 CDIP1Q9H305 208 aa8.41□□□□□ -1.06
TNFRSF9-201ENST00000377507 ABCA12Q86UK0 2595 aa8.4□□□□□ -1.06
TNFRSF9-201ENST00000377507 A0A1W2PRX2 142 aa8.4□□□□□ -1.06
TNFRSF9-201ENST00000377507 K7EQD1 137 aa8.4□□□□□ -1.06
TNFRSF9-201ENST00000377507 PRSS2P07478 247 aa8.4□□□□□ -1.06
TNFRSF9-201ENST00000377507 IFITM1P13164 125 aa8.4□□□□□ -1.06
TNFRSF9-201ENST00000377507 HERVK_113P63121 156 aa8.4□□□□□ -1.06
TNFRSF9-201ENST00000377507 RPL36AP83881 106 aaKnown RBP8.4□□□□□ -1.06
TNFRSF9-201ENST00000377507 LINC00242Q5T6M2 205 aa8.4□□□□□ -1.06
TNFRSF9-201ENST00000377507 DGAT2L7PQ6IED9 249 aa8.4□□□□□ -1.06
TNFRSF9-201ENST00000377507 Q6ZTI0 123 aa8.4□□□□□ -1.06
TNFRSF9-201ENST00000377507 C11orf44Q8N8P7 122 aa8.4□□□□□ -1.06
TNFRSF9-201ENST00000377507 RPL36ALQ969Q0 106 aaKnown RBP8.4□□□□□ -1.06
TNFRSF9-201ENST00000377507 SLC25A20O43772 301 aa8.39□□□□□ -1.07
TNFRSF9-201ENST00000377507 LINC00694P0DN24 101 aa8.39□□□□□ -1.07
TNFRSF9-201ENST00000377507 COX6A2Q02221 97 aa8.39□□□□□ -1.07
TNFRSF9-201ENST00000377507 KRTAP1-1Q07627 177 aa8.39□□□□□ -1.07
TNFRSF9-201ENST00000377507 SMAGPQ0VAQ4 97 aa8.39□□□□□ -1.07
TNFRSF9-201ENST00000377507 NTM-AS1Q6ZSK4 140 aa8.39□□□□□ -1.07
TNFRSF9-201ENST00000377507 YAE1D1Q9NRH1 226 aa8.39□□□□□ -1.07
TNFRSF9-201ENST00000377507 LINC01006Q8NI28 216 aa8.39□□□□□ -1.07
TNFRSF9-201ENST00000377507 MYO9AB2RTY4 2548 aa8.38□□□□□ -1.07
TNFRSF9-201ENST00000377507 PLAC8L1A1L4L8 177 aa8.38□□□□□ -1.07
TNFRSF9-201ENST00000377507 H7C2G1 150 aa8.38□□□□□ -1.07
TNFRSF9-201ENST00000377507 RNASE1P07998 156 aaKnown RBP8.38□□□□□ -1.07
TNFRSF9-201ENST00000377507 ATXN8Q156A1 80 aa8.38□□□□□ -1.07
TNFRSF9-201ENST00000377507 ANKRD29Q8N6D5 301 aa8.38□□□□□ -1.07
TNFRSF9-201ENST00000377507 C19orf73Q9NVV2 129 aa8.38□□□□□ -1.07
TNFRSF9-201ENST00000377507 APCP25054 2843 aa8.38□□□□□ -1.07
TNFRSF9-201ENST00000377507 C9JAW5 83 aa8.37□□□□□ -1.07
TNFRSF9-201ENST00000377507 TRIAP1O43715 76 aa8.37□□□□□ -1.07
TNFRSF9-201ENST00000377507 CDC42SE2Q9NRR3 84 aa8.37□□□□□ -1.07
TNFRSF9-201ENST00000377507 CIDEAO60543 219 aa8.37□□□□□ -1.07
TNFRSF9-201ENST00000377507 IGLV1-51P01701 117 aa8.37□□□□□ -1.07
TNFRSF9-201ENST00000377507 Q1RN00 199 aa8.37□□□□□ -1.07
TNFRSF9-201ENST00000377507 LINC01620Q4KN68 170 aa8.37□□□□□ -1.07
TNFRSF9-201ENST00000377507 CSNK1G2-AS1Q8NCQ2 148 aa8.36□□□□□ -1.07
TNFRSF9-201ENST00000377507 C16orf74Q96GX8 76 aa8.36□□□□□ -1.07
TNFRSF9-201ENST00000377507 OVOL2Q9BRP0 275 aa8.36□□□□□ -1.07
TNFRSF9-201ENST00000377507 NOP10Q9NPE3 64 aaKnown RBP8.36□□□□□ -1.07
TNFRSF9-201ENST00000377507 ICOSQ9Y6W8 199 aa8.36□□□□□ -1.07
TNFRSF9-201ENST00000377507 SMIM1B2RUZ4 78 aa8.35□□□□□ -1.07
TNFRSF9-201ENST00000377507 CIRBPQ14011 172 aaKnown RBP8.35□□□□□ -1.07
TNFRSF9-201ENST00000377507 TRBV10-2A0A0K0K1G8 114 aa8.35□□□□□ -1.07
TNFRSF9-201ENST00000377507 F5H768 121 aa8.35□□□□□ -1.07
TNFRSF9-201ENST00000377507 ITPR3Q14573 2671 aa8.34□□□□□ -1.07
TNFRSF9-201ENST00000377507 KMT2BQ9UMN6 2715 aaPredicted RBP8.34□□□□□ -1.07
TNFRSF9-201ENST00000377507 TRBV6-4A0A1B0GX49 114 aa8.34□□□□□ -1.07
TNFRSF9-201ENST00000377507 GAGE12JA6NER3 117 aa8.34□□□□□ -1.07
TNFRSF9-201ENST00000377507 H7C423 109 aa8.34□□□□□ -1.07
TNFRSF9-201ENST00000377507 NDUFA7O95182 113 aa8.34□□□□□ -1.07
TNFRSF9-201ENST00000377507 GAGE4Q13068 117 aa8.34□□□□□ -1.07
TNFRSF9-201ENST00000377507 GAGE5Q13069 117 aa8.34□□□□□ -1.07
TNFRSF9-201ENST00000377507 Q9H8V8 135 aa8.34□□□□□ -1.07
TNFRSF9-201ENST00000377507 RPL13AP40429 203 aaKnown RBP8.33□□□□□ -1.08
TNFRSF9-201ENST00000377507 LINC00308Q8TCZ7 52 aa8.33□□□□□ -1.08
TNFRSF9-201ENST00000377507 ZNF625Q96I27 306 aaPredicted RBP8.33□□□□□ -1.08
TNFRSF9-201ENST00000377507 PPDPFQ9H3Y8 114 aa8.33□□□□□ -1.08
TNFRSF9-201ENST00000377507 CHD6Q8TD26 2715 aa8.33□□□□□ -1.08
TNFRSF9-201ENST00000377507 TMEM262E9PQX1 116 aa8.33□□□□□ -1.08
TNFRSF9-201ENST00000377507 COX6CP09669 75 aa8.33□□□□□ -1.08
TNFRSF9-201ENST00000377507 NPC2P61916 151 aa8.33□□□□□ -1.08
TNFRSF9-201ENST00000377507 NBPF19A0A087WUL8 3843 aa8.32□□□□□ -1.08
TNFRSF9-201ENST00000377507 TRAV13-1A0A0B4J241 112 aa8.32□□□□□ -1.08
TNFRSF9-201ENST00000377507 DAND5Q8N907 189 aa8.32□□□□□ -1.08
TNFRSF9-201ENST00000377507 TMEM243Q9BU79 118 aa8.32□□□□□ -1.08
TNFRSF9-201ENST00000377507 XGP55808 180 aa8.31□□□□□ -1.08
TNFRSF9-201ENST00000377507 WFDC10AQ9H1F0 79 aa8.31□□□□□ -1.08
TNFRSF9-201ENST00000377507 TLN2Q9Y4G6 2542 aa8.31□□□□□ -1.08
TNFRSF9-201ENST00000377507 LST1O00453 97 aa8.31□□□□□ -1.08
TNFRSF9-201ENST00000377507 GAGE7O76087 117 aa8.31□□□□□ -1.08
TNFRSF9-201ENST00000377507 GAGE12FP0CL80 117 aa8.31□□□□□ -1.08
TNFRSF9-201ENST00000377507 GAGE12GP0CL81 117 aa8.31□□□□□ -1.08
TNFRSF9-201ENST00000377507 GAGE12IP0CL82 117 aa8.31□□□□□ -1.08
TNFRSF9-201ENST00000377507 HERV-K104P63124 156 aa8.31□□□□□ -1.08
TNFRSF9-201ENST00000377507 COPS9Q8WXC6 57 aa8.31□□□□□ -1.08
TNFRSF9-201ENST00000377507 TRGV2A0A075B6R0 118 aa8.3□□□□□ -1.08
TNFRSF9-201ENST00000377507 MT-ATP8P03928 68 aa8.3□□□□□ -1.08
TNFRSF9-201ENST00000377507 RPL35AP18077 110 aaKnown RBP8.3□□□□□ -1.08
TNFRSF9-201ENST00000377507 HILS1P60008 231 aa8.3□□□□□ -1.08
TNFRSF9-201ENST00000377507 NTN5Q8WTR8 489 aaPredicted RBP8.3□□□□□ -1.08
TNFRSF9-201ENST00000377507 CUBNO60494 3623 aa8.3□□□□□ -1.08
TNFRSF9-201ENST00000377507 SONP18583 2426 aaKnown RBP8.3□□□□□ -1.08
TNFRSF9-201ENST00000377507 H3BT86 120 aa8.29□□□□□ -1.08
TNFRSF9-201ENST00000377507 UBE2L6O14933 153 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms