RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 EPG5Q9HCE0 2579 aa9.52□□□□□ -0.89
ACTN1-202ENST00000376839 IGHV3OR16-12A0A075B7B8 117 aa9.51□□□□□ -0.89
ACTN1-202ENST00000376839 RPL13AP40429 203 aaKnown RBP9.51□□□□□ -0.89
ACTN1-202ENST00000376839 C4orf3Q8WVX3 66 aa9.51□□□□□ -0.89
ACTN1-202ENST00000376839 LINC01600Q96MT4 127 aa9.51□□□□□ -0.89
ACTN1-202ENST00000376839 CITED1Q99966 193 aa9.51□□□□□ -0.89
ACTN1-202ENST00000376839 IGLV5-45A0A087WSX0 123 aa9.51□□□□□ -0.89
ACTN1-202ENST00000376839 NDUFA7O95182 113 aa9.51□□□□□ -0.89
ACTN1-202ENST00000376839 C2orf82Q6UX34 121 aa9.51□□□□□ -0.89
ACTN1-202ENST00000376839 WNK1Q9H4A3 2382 aa9.51□□□□□ -0.89
ACTN1-202ENST00000376839 ZNF462Q96JM2 2506 aa9.51□□□□□ -0.89
ACTN1-202ENST00000376839 CRLF1O75462 422 aa9.5□□□□□ -0.89
ACTN1-202ENST00000376839 LINC00694P0DN24 101 aa9.5□□□□□ -0.89
ACTN1-202ENST00000376839 DGAT2L7PQ6IED9 249 aa9.5□□□□□ -0.89
ACTN1-202ENST00000376839 Q8N2B8 174 aa9.5□□□□□ -0.89
ACTN1-202ENST00000376839 RNF183Q96D59 192 aa9.5□□□□□ -0.89
ACTN1-202ENST00000376839 NDUFA1O15239 70 aa9.5□□□□□ -0.89
ACTN1-202ENST00000376839 TIRAPP58753 221 aa9.5□□□□□ -0.89
ACTN1-202ENST00000376839 UBE2WQ96B02 151 aa9.5□□□□□ -0.89
ACTN1-202ENST00000376839 NOTCH3Q9UM47 2321 aa9.5□□□□□ -0.89
ACTN1-202ENST00000376839 TIMM17BO60830 172 aa9.5□□□□□ -0.89
ACTN1-202ENST00000376839 KRTAP10-9P60411 292 aa9.5□□□□□ -0.89
ACTN1-202ENST00000376839 ODF3L2Q3SX64 289 aa9.5□□□□□ -0.89
ACTN1-202ENST00000376839 ZNF625Q96I27 306 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-202ENST00000376839 CLUHP3Q96NS8 147 aa9.5□□□□□ -0.89
ACTN1-202ENST00000376839 YAE1D1Q9NRH1 226 aa9.5□□□□□ -0.89
ACTN1-202ENST00000376839 C2CD3Q4AC94 2353 aa9.5□□□□□ -0.89
ACTN1-202ENST00000376839 A0A0U1RRA0 63 aa9.49□□□□□ -0.89
ACTN1-202ENST00000376839 COX6CP09669 75 aa9.49□□□□□ -0.89
ACTN1-202ENST00000376839 TRAV4A0A0B4J268 109 aa9.49□□□□□ -0.89
ACTN1-202ENST00000376839 LINC00242Q5T6M2 205 aa9.49□□□□□ -0.89
ACTN1-202ENST00000376839 Q9H8V8 135 aa9.49□□□□□ -0.89
ACTN1-202ENST00000376839 NF1P21359 2839 aa9.48□□□□□ -0.89
ACTN1-202ENST00000376839 TRGV1A0A0A0MS02 117 aa9.48□□□□□ -0.89
ACTN1-202ENST00000376839 LST1O00453 97 aa9.48□□□□□ -0.89
ACTN1-202ENST00000376839 C1orf158Q8N1D5 194 aa9.48□□□□□ -0.89
ACTN1-202ENST00000376839 TEX29Q8N6K0 151 aa9.48□□□□□ -0.89
ACTN1-202ENST00000376839 CITED2Q99967 270 aaPredicted RBP9.48□□□□□ -0.89
ACTN1-202ENST00000376839 SONP18583 2426 aaKnown RBP9.48□□□□□ -0.89
ACTN1-202ENST00000376839 NIPBLQ6KC79 2804 aaeCLIP9.48□□□□□ -0.89
ACTN1-202ENST00000376839 TRAV8-4A0A0B4J246 113 aa9.48□□□□□ -0.89
ACTN1-202ENST00000376839 IFITM1P13164 125 aa9.48□□□□□ -0.89
ACTN1-202ENST00000376839 IGLV5-39A0A0G2JS06 123 aa9.47□□□□□ -0.89
ACTN1-202ENST00000376839 PRB1P04280 392 aa9.47□□□□□ -0.89
ACTN1-202ENST00000376839 SNCGO76070 127 aa9.46□□□□□ -0.89
ACTN1-202ENST00000376839 NTM-AS1Q6ZSK4 140 aa9.46□□□□□ -0.89
ACTN1-202ENST00000376839 LINC00308Q8TCZ7 52 aa9.46□□□□□ -0.89
ACTN1-202ENST00000376839 ANAPC13Q9BS18 74 aa9.46□□□□□ -0.89
ACTN1-202ENST00000376839 TRAV13-1A0A0B4J241 112 aa9.46□□□□□ -0.9
ACTN1-202ENST00000376839 H3BT86 120 aa9.46□□□□□ -0.9
ACTN1-202ENST00000376839 C11orf44Q8N8P7 122 aa9.46□□□□□ -0.9
ACTN1-202ENST00000376839 HERVK_113P63121 156 aa9.46□□□□□ -0.9
ACTN1-202ENST00000376839 SOSTDC1Q6X4U4 206 aa9.46□□□□□ -0.9
ACTN1-202ENST00000376839 Q6ZTI0 123 aa9.46□□□□□ -0.9
ACTN1-202ENST00000376839 IL17DQ8TAD2 202 aa9.46□□□□□ -0.9
ACTN1-202ENST00000376839 JMJD1CQ15652 2540 aa9.45□□□□□ -0.9
ACTN1-202ENST00000376839 SMIM1B2RUZ4 78 aa9.45□□□□□ -0.9
ACTN1-202ENST00000376839 STHQ8IWL8 128 aa9.45□□□□□ -0.9
ACTN1-202ENST00000376839 CIRBPQ14011 172 aaKnown RBP9.45□□□□□ -0.9
ACTN1-202ENST00000376839 NBPF19A0A087WUL8 3843 aa9.44□□□□□ -0.9
ACTN1-202ENST00000376839 A0A1W2PRX2 142 aa9.44□□□□□ -0.9
ACTN1-202ENST00000376839 GAGE2BQ13066 116 aa9.44□□□□□ -0.9
ACTN1-202ENST00000376839 GAGE2EQ4V326 116 aa9.44□□□□□ -0.9
ACTN1-202ENST00000376839 GAGE2DQ9UEU5 116 aa9.44□□□□□ -0.9
ACTN1-202ENST00000376839 SETD2Q9BYW2 2564 aaPredicted RBP9.44□□□□□ -0.9
ACTN1-202ENST00000376839 NHLRC4P0CG21 123 aaPredicted RBP9.44□□□□□ -0.9
ACTN1-202ENST00000376839 C15orf53Q8NAA6 179 aa9.44□□□□□ -0.9
ACTN1-202ENST00000376839 K7EQD1 137 aa9.43□□□□□ -0.9
ACTN1-202ENST00000376839 GAGE12JA6NER3 117 aa9.43□□□□□ -0.9
ACTN1-202ENST00000376839 RPL36AP83881 106 aaKnown RBP9.43□□□□□ -0.9
ACTN1-202ENST00000376839 GAGE4Q13068 117 aa9.43□□□□□ -0.9
ACTN1-202ENST00000376839 GAGE5Q13069 117 aa9.43□□□□□ -0.9
ACTN1-202ENST00000376839 RPL36ALQ969Q0 106 aaKnown RBP9.43□□□□□ -0.9
ACTN1-202ENST00000376839 UBR5O95071 2799 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-202ENST00000376839 SETXQ7Z333 2677 aaKnown RBP9.42□□□□□ -0.9
ACTN1-202ENST00000376839 TTC32Q5I0X7 151 aa9.42□□□□□ -0.9
ACTN1-202ENST00000376839 PRIMA1Q86XR5 153 aa9.42□□□□□ -0.9
ACTN1-202ENST00000376839 Q96MF0 132 aa9.42□□□□□ -0.9
ACTN1-202ENST00000376839 F5H768 121 aa9.41□□□□□ -0.9
ACTN1-202ENST00000376839 FAM19A3Q7Z5A8 133 aa9.41□□□□□ -0.9
ACTN1-202ENST00000376839 CDC42SE2Q9NRR3 84 aa9.41□□□□□ -0.9
ACTN1-202ENST00000376839 USP24Q9UPU5 2620 aa9.41□□□□□ -0.9
ACTN1-202ENST00000376839 TRBV10-1A0A0K0K1A3 114 aa9.41□□□□□ -0.9
ACTN1-202ENST00000376839 NDUFV3P56181 108 aaKnown RBP9.41□□□□□ -0.9
ACTN1-202ENST00000376839 DEFB113Q30KQ7 82 aa9.41□□□□□ -0.9
ACTN1-202ENST00000376839 MEIG1Q5JSS6 88 aa9.41□□□□□ -0.9
ACTN1-202ENST00000376839 CSDC2Q9Y534 153 aaKnown RBP9.41□□□□□ -0.9
ACTN1-202ENST00000376839 DAZ2Q13117 558 aaKnown RBP9.4□□□□□ -0.9
ACTN1-202ENST00000376839 DAZ4Q86SG3 579 aaKnown RBP9.4□□□□□ -0.9
ACTN1-202ENST00000376839 NOP10Q9NPE3 64 aaKnown RBP9.4□□□□□ -0.9
ACTN1-202ENST00000376839 DAZ3Q9NR90 486 aaKnown RBP9.4□□□□□ -0.9
ACTN1-202ENST00000376839 ITPR3Q14573 2671 aa9.4□□□□□ -0.9
ACTN1-202ENST00000376839 APCP25054 2843 aa9.4□□□□□ -0.91
ACTN1-202ENST00000376839 COX7A2LO14548 114 aa9.39□□□□□ -0.91
ACTN1-202ENST00000376839 DEFB121Q5J5C9 76 aa9.39□□□□□ -0.91
ACTN1-202ENST00000376839 CCDC168Q8NDH2 2452 aa9.38□□□□□ -0.91
ACTN1-202ENST00000376839 TRAV25A0A0B4J276 109 aa9.38□□□□□ -0.91
ACTN1-202ENST00000376839 LOC100131303A0A0U1RQF7 123 aa9.38□□□□□ -0.91
ACTN1-202ENST00000376839 SHISA2Q6UWI4 295 aa9.38□□□□□ -0.91
ACTN1-202ENST00000376839 CCL24O00175 119 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms